BAC Information

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BAC

Clone NameB6Ng01-067L17
ChromosomeX (Build37)15 (Build37)
Map Location 37,204,823 - 37,205,98588,614,614 - 88,614,835
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene6030498E09Rik, LOC547171, LOC670539, LOC100039700, 1700085A12Rik, LOC100039715
Downstream geneEG636756, EG636766, EG245391, LOC100039769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067L17.bB6Ng01-067L17.g
ACCDH886526DH886527
length1,146911
definitionDH886526|Mus musculus domesticus DNA, BAC clone: B6Ng01-067L17, 5' end.DH886527|Mus musculus domesticus DNA, BAC clone: B6Ng01-067L17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(37,204,823 - 37,205,985)(88,614,614 - 88,614,835)
sequence
gaattcaattatccatcatgtcatagtgacaattttacttataatgggac
taatgaagaaagaatcttctacaaattttaaaatatagtgtattattatc
caatatattcactatggaaatatattagggttgtgttacatattaatgtt
gtattacaaagactatacctttcttctcatatattaattatatgaaacag
agggttgtgttgtgccattttacatatcaatataatacactgtgatcaca
ttcatcttcaatatctcctttgttcctctcccacaattacttatgctgac
tcttcatcacagatattttcccatctactttcctttttttaaaatttttg
ttattgtatttgagattttcttataacatgcattgaattcattttgccat
gcttctgtctttatttaaaacttagactataggtataaaagataatgcca
ttttttttttacttctgtctggcttattcagattaacataattctctagt
gcactcacgtttctgaagatgacataattttctttttcttttgtaagtaa
aataaatatgtgaatgtattccacatttttcttttaatttatctgctggt
ggacacatattttggttaacatcttaaatatttggaaagcttgaataaga
atggactccatcagctcaggattaggcgatgtggctttgatagaggatgt
gtgtcaatgtgggcagtctttgcttcaaaagactccttgtattctcattt
aatctccctgccctctcattgtatagagatatgaagtctcatttatcctg
ctggcatgcctttgctctgccatcatcacctctaaccctaagtaaatgct
ttcttttataagttgtctcagtcatgataatttataaccttatataaaag
taagacagatattaagaagagtgatggaaccaatatggtgtatacatatc
attactatatgatggcctagaataccatagtggagcattttgtgagttcc
ctttcagttctggagaacatttccatagtggattttcttgatggctacat
cattcatatcaagcaatgcatatagtattcctttttccctaaacatactc
accaagtgaattgtaatttctgtcagcattccaattccttatctcc
gaattctttgtttagctctgagcaccattttttaatggggttatttgatt
ttctggagttccccttcttgagttctttatatattttagatattagtcct
ctatctgatttaggattggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgattgtgtcttttgccttacagaagctttgaaatttta
tgaggccccctttgtcaattctcgatcttataacacaagccatttctgtt
ctgtccaagaatttttctcctgtgcccatatcttttaggatttcccccca
ctttctcctctataaatttcaatgtctctgattttatgtggagtaccttg
attgaatttgaattgagctttgtacaaggagatagaatttgtcaatttgc
attcttctatatgataacctccagttaagccagcaccatttgttgaaaag
tttgtctttttttccattgaatggttttagctctcttatcaaacaaagat
caagtggccataggtgtgtgggttcatttctgggtcttcagttttactcc
attgatctacctgtctgtggctttaccagtacactgcaattattaacaca
attgctctgtagtacatcttgaggtcaggcatggtgattcccccagaggt
tattttattgttgagaatagtttttgatatcctgggttttctttttcttt
ttttttttcattccagatgaatttgaaaattgccctttttaacattatag
aatctcagggataccaacatgaagtatagctatcagactctttaccagac
tccaaattttgctatgtctaaaaaaaaagtttttcattttctcatttcaa
atcagtaaatatatgggtgaaacaatcactcattgcctctgaccattaga
aaaaaaatgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_37204823_37205985
seq2: B6Ng01-067L17.b_47_1192 (reverse)

seq1  GGAGATAAGGAAAATTGGGAAATGCTTGACAGGAAAATAACAAATCACAT  50
      ||||||||||  ||||||  ||||| ||||||  |||| |||| ||||  
seq2  GGAGATAAGG--AATTGG--AATGC-TGACAG--AAATTACAATTCAC--  41

seq1  TTGTTGATGATGATCTAGGGGAAAAAGGAATACTAATATGCATTGCTTTG  100
      ||| |||  ||| | || |||||||||||||||| |||||||||||||  
seq2  TTGGTGAGTATG-TTTA-GGGAAAAAGGAATACT-ATATGCATTGCTT--  86

seq1  AATATGAATGATGTTAGCCATCAAGGAAAATCACTATGGAAATG-TCTCC  149
       |||||||||||| ||||||||||| |||  ||||||||||||| |||||
seq2  GATATGAATGATG-TAGCCATCAAGAAAATCCACTATGGAAATGTTCTCC  135

seq1  AAGAACTGGAAAGGGAACT-ACCAAATGTCTCCACTATGTGATTCTAAGC  198
       |||||| ||||||||||| || ||||| ||||||||||  |||||| ||
seq2  -AGAACT-GAAAGGGAACTCACAAAATG-CTCCACTATGGTATTCTAGGC  182

seq1  CATCATATAGTAATGATATGTATACACCATATTTGTTCCATCACTCTTCT  248
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CATCATATAGTAATGATATGTATACACCATATTGGTTCCATCACTCTTCT  232

seq1  TAATATCTGTCTTACTTTTATATTAAGGTTATAAATTATCATGACTGAGA  298
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TAATATCTGTCTTACTTTTATA-TAAGGTTATAAATTATCATGACTGAGA  281

seq1  CAACTTATAAAAGAAAGCATTTACTTAGGGTTAGAGGTGATGATGGCAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTATAAAAGAAAGCATTTACTTAGGGTTAGAGGTGATGATGGCAGA  331

seq1  GCAAAGGCATGCCAGCAGGATAAATGAGACTTCATATCTCTATACAATGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGCATGCCAGCAGGATAAATGAGACTTCATATCTCTATACAATGA  381

seq1  GAGGGCAGGGAGATTAAATGAGAATACAAGGAGTCTTTTGAAGCAAAGAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCAGGGAGATTAAATGAGAATACAAGGAGTCTTTTGAAGCAAAGAC  431

seq1  TGCCCACATTGACACACATCCTCTATCAAAGCCACATCGCCTAATCCTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACATTGACACACATCCTCTATCAAAGCCACATCGCCTAATCCTGA  481

seq1  GCTGATGGAGTCCATTCTTATTCAAGCTTTCCAAATATTTAAGATGTTAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGGAGTCCATTCTTATTCAAGCTTTCCAAATATTTAAGATGTTAA  531

seq1  CCAAAATATGTGTCCACCAGCAGATAAATTAAAAGAAAAATGTGGAATAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATATGTGTCCACCAGCAGATAAATTAAAAGAAAAATGTGGAATAC  581

seq1  ATTCACATATTTATTTTACTTACAAAAGAAAAAGAAAATTATGTCATCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACATATTTATTTTACTTACAAAAGAAAAAGAAAATTATGTCATCTT  631

seq1  CAGAAACGTGAGTGCACTAGAGAATTATGTTAATCTGAATAAGCCAGACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACGTGAGTGCACTAGAGAATTATGTTAATCTGAATAAGCCAGACA  681

seq1  GAAGTAAAAAAAAAATGGCATTATCTTTTATACCTATAGTCTAAGTTTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAAAAAAAAAATGGCATTATCTTTTATACCTATAGTCTAAGTTTTA  731

seq1  AATAAAGACAGAAGCATGGCAAAATGAATTCAATGCATGTTATAAGAAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGACAGAAGCATGGCAAAATGAATTCAATGCATGTTATAAGAAAA  781

seq1  TCTCAAATACAATAACAAAAATTTTAAAAAAAGGAAAGTAGATGGGAAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAATACAATAACAAAAATTTTAAAAAAAGGAAAGTAGATGGGAAAA  831

seq1  TATCTGTGATGAAGAGTCAGCATAAGTAATTGTGGGAGAGGAACAAAGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTGATGAAGAGTCAGCATAAGTAATTGTGGGAGAGGAACAAAGGA  881

seq1  GATATTGAAGATGAATGTGATCACAGTGTATTATATTGATATGTAAAATG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGAAGATGAATGTGATCACAGTGTATTATATTGATATGTAAAATG  931

seq1  GCACAACACAACCCTCTGTTTCATATAATTAATATATGAGAAGAAAGGTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAACACAACCCTCTGTTTCATATAATTAATATATGAGAAGAAAGGTA  981

seq1  TAGTCTTTGTAATACAACATTAATATGTAACACAACCCTAATATATTTCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTTGTAATACAACATTAATATGTAACACAACCCTAATATATTTCC  1031

seq1  ATAGTGAATATATTGGATAATAATACACTATATTTTAAAATTTGTAGAAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGAATATATTGGATAATAATACACTATATTTTAAAATTTGTAGAAG  1081

seq1  ATTCTTTCTTCATTAGTCCCATTATAAGTAAAATTGTCACTATGACATGA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTCTTCATTAGTCCCATTATAAGTAAAATTGTCACTATGACATGA  1131

seq1  TGGATAATTGAATTC  1163
      |||||||||||||||
seq2  TGGATAATTGAATTC  1146

seq1: chr15_88614614_88614835
seq2: B6Ng01-067L17.g_768_981

seq1  TTTTTTTTTTTCCT-----ATGATAGGGAAGCCTCAACCATCACTGGGAC  45
      |||||||||||| |     ||||    |||   |   ||  |  |   ||
seq2  TTTTTTTTTTTCATTCCAGATGAATTTGAAAATT--GCC--CTTTTTAAC  46

seq1  ATTATAGAGTCCCAAGGATACCAACATGAAGTATCAGCTATCAGACTCTT  95
      |||||||| || || ||||||||||||||||||| |||||||||||||||
seq2  ATTATAGAATCTCAGGGATACCAACATGAAGTAT-AGCTATCAGACTCTT  95

seq1  TACCAGACTCCAAAGTTTTTGCTTATGTCTAAAAGAAAAAGTTTTTCATT  145
      ||||||||||||||  |||||| ||||||||||| |||||||||||||||
seq2  TACCAGACTCCAAA--TTTTGC-TATGTCTAAAA-AAAAAGTTTTTCATT  141

seq1  TTCTCATTTCAAATCAGTTAAATATTCTGGGTGAAACAAATCACTCATTG  195
      ||||||||||||||||| |||||| | |||||||||| ||||||||||||
seq2  TTCTCATTTCAAATCAG-TAAATA-TATGGGTGAAAC-AATCACTCATTG  188

seq1  CCTCTGACCTTTTAGAAAACAAATGTT  222
      |||||||||  |||||||| |||||||
seq2  CCTCTGACC-ATTAGAAAAAAAATGTT  214