BAC Information

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BAC

Clone NameB6Ng01-068D02
Chromosome6 (Build37)15 (Build37)
Map Location 7,263,187 - 7,263,59231,533,412 - 31,534,140
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG667468, LOC667471, LOC100040096, Shfm1, LOC545826, Dlx6as, Dlx5, Acn9, EG667500
Downstream geneTac1, LOC667511, Asns, EG667529, C1galt1, LOC100040661, Col28a1, BC020002, Rpa3, LOC100036521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068D02.bB6Ng01-068D02.g
ACCDH886854DH886855
length986731
definitionDH886854|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D02, 5' end.DH886855|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(7,263,187 - 7,263,592)(31,533,412 - 31,534,140)
sequence
gaattcctgagtttgtaatatattatggcactaaatccaacattagccct
tttgaaacactaagatttctaaaattcagatttatctagtgatcaaaaat
aatttgcgatcttccgtctgaacccagccgaggctgctaagggctccaga
gtactctccatgccgcaggacctcaggctggaatacgttccagtcggggc
cacccctgccatcttccttctgaacccagctgaggccgctaaggactcca
gagtactttctgcctcaggatcaactcaggatcacaggtgggtggaactc
aaaatcggctccaaagaatcaaggagggtcttgcgccagcaggaacagag
atggaggaatcccggttgaccagagtctgggatccattcagatcagggtc
agcccccgccatcatctgcatgaacactgccgagggtgtctagggcccca
gaggactctccaagctgcagtacccctagcacacccaggaactccggatc
acctgagaacacataggcgacagaagcaacagagcttcttggacagggtc
cctttgggccttcatcctcagccagcaggcagagctgagacccagaccac
tgggccccttccttgccagaggagagtcggcctacagagaggactctgac
cccaggattcaggaggtggatcagaactccagacttctggacacctgccc
agcaagaggagagcttgcctgcagagagtgctctgaccactggaacccag
gtaagagctggactcccaggagtgctgacagaggttaacagaatcacagg
aggatcaagctacagccagagacagcttaaacattaacaccagagatttc
cagatggtgaaaggcaaacattagaatcttactaacagaaaccaagaata
ctggggcatcgtcagaacccagtacacgcaccacagtgagtcctggatac
cccaacatacccaaacagcagacacagatttaaatc
gaattctttctttttttaaaaaagggatttatttattattatacataagt
acactgtagctgactttggatgcaccagaagagggtgtcagatctgatta
ctggtggttgtgagccaccatgtggttgctggaatttgaactcgggatct
ttggaagagcagtcagtgctcttaccggctgagccatctcgccagccccc
cagaaaaaattcttatttaaataataatacttaggttcatctgtaaggta
ctggttaggagcaacatggatgaatccagaggatatcattttaagtgtag
taagatggtgagagaccacatactgtatgtgtgtgcatatttatgtgtat
atttgcatggtcctgtgtgtgtgcaggagttccatatgtgtactcatgta
ggccacagtttgatgtaggtatttctgttgtagtccacttaatttttttg
ggatggtcactcaccgaccttgcctgtttttgcgaggctggcttgacagc
cagcttctgggatttgtcatcaccttccagtgctgtggttgcgcctgtct
tttccatgggtgctgggaatctgaacagcaagcactctgcccactgagct
ctccctggcctttgcaagctagttgatataagtcaccttttgaagacaat
tagtgtaagtccgaagttgaggaagtagagactaaacgtagtggtactta
gggtgggtggcagagggtggatgggggagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_7263187_7263592
seq2: B6Ng01-068D02.b_253_706

seq1  GCCATCTTCCTTCTGAACCCAGCAGAGG-CTCCAAGGGATCCAGAGTACT  49
      ||||||||||||||||||||||| |||| | | ||||  |||||||||||
seq2  GCCATCTTCCTTCTGAACCCAGCTGAGGCCGCTAAGGACTCCAGAGTACT  50

seq1  CTCCATGCTGCAGGATCTCTGGATCACCTTGGAATCAAGGGTGAGTGGAG  99
           | ||||     ||| |||||| ||  | ||||  |||| ||||| 
seq2  -----TTCTGC-----CTCAGGATCAACTCAGGATCACAGGTGGGTGGAA  90

seq1  CACAGCTTCAGCTCCAGAGAATCTCGGGGGCAGGGGAAGGAGGGAGGTCT  149
      | ||   || |||||| ||||||             ||||||   |||||
seq2  CTCAAAATCGGCTCCAAAGAATC-------------AAGGAG---GGTCT  124

seq1  TGTGCCAGCGGGAACTG-GATGGAAGAACCACACCCGACCAGGGGCTCAG  198
      || |||||| ||||| | |||||| ||| | |    |||||| | ||  |
seq2  TGCGCCAGCAGGAACAGAGATGGAGGAATCCCGGTTGACCAGAGTCTGGG  174

seq1  ATCCATTCTGGTTGGAGCCA-CCCCTGCCATCTTCCTTCTGAACAC-GCT  246
      |||||||| | |  | | || |||| |||||| ||    ||||||| || 
seq2  ATCCATTCAGATCAGGGTCAGCCCCCGCCATCATCTGCATGAACACTGCC  224

seq1  GGAGGCCACCAGGAGCACTAGAGTACTCCCCACAATG-------------  283
      |  ||   | ||| || | |||| |||| |||   ||             
seq2  GAGGGTGTCTAGG-GCCCCAGAGGACTCTCCAAGCTGCAGTACCCCTAGC  273

seq1  -----CAGGACCTCAGGATCACCT--------------------------  302
           ||||| ||| |||||||||                          
seq2  ACACCCAGGAACTCCGGATCACCTGAGAACACATAGGCGACAGAAGCAAC  323

seq1  --------CTGGA------------------TCATGATCA--CGGGAGGC  324
               ||||                  ||||  |||  | | ||||
seq2  AGAGCTTCTTGGACAGGGTCCCTTTGGGCCTTCATCCTCAGCCAGCAGGC  373

seq1  AGAGCTGAGACCCAGACCCCTTGGGCACCTTCCTTGCCAGACGAGAGTCA  374
      |||||||||||||||||| | ||||| |||||||||||||| ||||||| 
seq2  AGAGCTGAGACCCAGACCAC-TGGGCCCCTTCCTTGCCAGAGGAGAGTCG  422

seq1  GCCTACAGGGAGGGCTCTGACCCCAGGACTCA  406
      |||||||| |||| |||||||||||||| |||
seq2  GCCTACAGAGAGGACTCTGACCCCAGGATTCA  454

seq1: chr15_31533412_31534140
seq2: B6Ng01-068D02.g_68_798

seq1  GAATTCTTTCTTTTTTTAAAAAAGGGATTTATTTATTATTATACATAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTTTTTTAAAAAAGGGATTTATTTATTATTATACATAAGT  50

seq1  ACACTGTAGCTGACTTTGGATGCACCAGAAGAGGGTGTCAGATCTGATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTAGCTGACTTTGGATGCACCAGAAGAGGGTGTCAGATCTGATTA  100

seq1  CTGGTGGTTGTGAGCCACCATGTGGTTGCTGGAATTTGAACTCGGGATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGTTGTGAGCCACCATGTGGTTGCTGGAATTTGAACTCGGGATCT  150

seq1  TTGGAAGAGCAGTCAGTGCTCTTACCGGCTGAGCCATCTCGCCAGCCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGAGCAGTCAGTGCTCTTACCGGCTGAGCCATCTCGCCAGCCCCC  200

seq1  CAGAAAAAATTCTTATTTAAATAATAATACTTAGGTTCATCTGTAAGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAATTCTTATTTAAATAATAATACTTAGGTTCATCTGTAAGGTA  250

seq1  CTGGTTAGGAGCAACATGGATGAATCCAGAGGATATCATTTTAAGTGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTAGGAGCAACATGGATGAATCCAGAGGATATCATTTTAAGTGTAG  300

seq1  TAAGATGGTGAGAGACCACATACTGTATGTGTGTGCATATTTATGTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGGTGAGAGACCACATACTGTATGTGTGTGCATATTTATGTGTAT  350

seq1  ATTTGCATGGTCCTGTGTGTGTGCAGGAGTTCCATATGTGTACTCATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATGGTCCTGTGTGTGTGCAGGAGTTCCATATGTGTACTCATGTA  400

seq1  GGCCACAGTTTGATGTAGGTATTTCTGTTGTAGTCCACTTAATTTTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACAGTTTGATGTAGGTATTTCTGTTGTAGTCCACTTAATTTTTTTG  450

seq1  GGATGGTCACTCACCGACCTTGCCTGTTTTTGCGAGGCTGGCTTGACAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTCACTCACCGACCTTGCCTGTTTTTGCGAGGCTGGCTTGACAGC  500

seq1  CAGCTTCTGGGATTTGTCATCACCTTCCAGTGCTGTGGTTGCGCCTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCTGGGATTTGTCATCACCTTCCAGTGCTGTGGTTGCGCCTGTCT  550

seq1  TTTCCATGGGTGCTGGGAATCTGAACAGCAAGCACTCTGCCCACTGAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGGGTGCTGGGAATCTGAACAGCAAGCACTCTGCCCACTGAGCT  600

seq1  CTCCCTGGCCTTTGCAAGCTAGTTGATATAAGTCACC-TTTGAAGACAAT  649
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTCCCTGGCCTTTGCAAGCTAGTTGATATAAGTCACCTTTTGAAGACAAT  650

seq1  TAGTGTAAGTCCGAAGTTGAGGAAGTAGAGACTAAACGTAGTGGTACTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTAAGTCCGAAGTTGAGGAAGTAGAGACTAAACGTAGTGGTACTTA  700

seq1  GGGTGGGTGGCAGAGGGTGGAT-GGGGAGAA  729
      |||||||||||||||||||||| ||||||||
seq2  GGGTGGGTGGCAGAGGGTGGATGGGGGAGAA  731