BAC Information

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BAC

Clone NameB6Ng01-068E13
Chromosome15 (Build37)
Map Location 24,709,084 - 24,846,389
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC666989, LOC666999, LOC100040492, LOC100040499
Downstream geneLOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068E13.bB6Ng01-068E13.g
ACCDH886914DH886915
length1,1941,158
definitionDH886914|Mus musculus domesticus DNA, BAC clone: B6Ng01-068E13, 5' end.DH886915|Mus musculus domesticus DNA, BAC clone: B6Ng01-068E13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,845,171 - 24,846,389)(24,709,084 - 24,710,247)
sequence
gaattcttgtagcttcataaaatggatacaagcaaaattcattttaaagt
tgattcctccttgaccacaacttctaactcataagaatattggctcatat
cttgattttgtggaagatagtttatgttttcttaaccactttctgtgaga
ggaatgtgcaaagaaaacctatgttgcaattgaatgagttcataaataaa
aatgtggtttgggaatatatagtaacataaatattcattgtaattaagga
ggtagcccagtccccaacagtgtccagctatttgattcaacttaaatcta
attataatatataacatttaaaagaagcagctgcattatgcaaagaacac
agtggtcagaatctatgaaaagataatagcatgcacttatcttatgaaca
gtcaggctgagaatcttgaatattgtatgtgtcagaactatttatctgtc
aagtcacgacaatgctcatgtaaggatttcattttattaaccccaagaaa
caatattttgtttaatataatcaccatgtggttaacttagaataatactc
tcgcggtgacatgaaaattgtggtgttataatgaagaacacgttctgatt
aaaagaagccatgtgaaggcgatgttctgcaagttcacacaaacatcttt
ggtttgttcttcctggacaacgtaacctttctctcaactgtcaaagagga
tttactcactttaagcagcacgtgaacactgtagataaaaatttctcgca
tccagcacaacagagtccgtgtctgatttcctagaaaacagaaatgggta
tgtaaatgatatacatactcatatttgaatgcaaatgtgaacttgcttca
aaataaattctggaagaagcccaagtataaaagaaagtcacaattttcta
aagccattccaccagtgcctgaattgattagtgagaaacgagtaaatatt
agatccccatttagctttgcactgcatttttggacaaagcagagattcag
tggaaatagaagtcttcggattgctctgtgtggttcaggatccaggtaca
cacaatacaggtccacaatgcagctccaacagtctttttttttggaacct
cagacatctgcttggactctgggtggccttctggttaattccacatgtca
gggcatatccaaattgcagcaagaataggtagggattcagccat
gaattctagtggagcagaaaggagtttgagattaaggtagacaggaggga
aagtacaaatgtcaaggggtttctattctgaaggaaataaaatgcctgga
cccctaccccattctccaggtaaggctctaagactccagccatcaacttc
acacttccctactgcctacccaagaaccccatttcatgccttcctgtcca
cgtctcccctctagacagtggggaattggttgtgagaatattataattct
acagatggtctgttcctgggataataagctccacttagccctcaccaagc
tgagactgcttttaattttccattcagaaattaacactgagtggttccaa
gatttacctataacccataatcagttaagaatgtgtttacaagtctgggt
aacagcaatcagagacccaaacattcaacaaacaggaatatctatctaca
gccatatatctacgtctttatctctgtctccatctccatctctctatctc
tatcttcatctccatctccatctctctatctctatcttcatctccatctc
tctatctctatctctatatctatctctatatctatatctacttataacaa
aaatcattaccaatgactggttggtgacatctgaacagatgtctaggtcc
tattacagaacaaaaataggacaatatatcatctccaaaaattggtacta
agttactaataatcccaaaatttaatttacgtggcattcaagacaataat
ttcaaaatactaataacaaatatgttcaaaaaatttcaaaaagtatatga
accaatgcctaaatgaagacaataattcacaagcagtttagataccatac
tgaaacaactcagatatgagaatatatgagacatagtcttaatgcaaaaa
caaattgaattaaaattgaccttaaagttcaggaataaaataaatgcttc
aatgaaatccccattagtaattgggtcaaatgtaagaggatacctgctct
tgaaggcaaggaaggattggaatccacaccagtgttccggatagattatg
tcatttgacctaagcaatggtcatctgggattaagacataggtctccatt
caatcagcttgacaccaacctgagaaactttataatgagatatgatgcta
gagtgacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_24845171_24846389
seq2: B6Ng01-068E13.b_44_1237 (reverse)

seq1  ATGGCTGAATTCCCTACCATTCATCTTGCTTGCAATTTGGGAAAATGCCT  50
      ||||||||| ||||||||  |  |||||| ||||||||||  | ||||| 
seq2  ATGGCTGAA-TCCCTACC--TATTCTTGC-TGCAATTTGG--ATATGCCC  44

seq1  TGAACATGTGAGAATTAACCAGAAAGCCCAACCCAAGAGTCCAAGACAGG  100
      || ||||||| ||||||||||||| |||  |||| |||||||||| || |
seq2  TG-ACATGTG-GAATTAACCAGAAGGCC--ACCC-AGAGTCCAAG-CA-G  87

seq1  ATGTCCTGAAGTTTCCAAAAAAAAAAAGGCTGTGTGAGCTGCATTGTGTG  150
      |||| |||| ||| |   |||||||||| ||||  ||||||||||||| |
seq2  ATGT-CTGAGGTTCC---AAAAAAAAAGACTGTTGGAGCTGCATTGTG-G  132

seq1  ACCTGTATTGTGTGTTACCTGGATCCTGAACCACACAGGAGCAATCCGAA  200
      |||||||||||||| |||||||||||||||||||||| ||||||||||||
seq2  ACCTGTATTGTGTG-TACCTGGATCCTGAACCACACA-GAGCAATCCGAA  180

seq1  GAACTTCTATTTCCACTGAATTCTCTGCTTTGTCCAAAAATGCAGTTGCA  250
      | |||||||||||||||||| |||||||||||||||||||||||| ||||
seq2  G-ACTTCTATTTCCACTGAA-TCTCTGCTTTGTCCAAAAATGCAG-TGCA  227

seq1  AAGCTAAATGGGGATCTAATATTTACTACGTTTCTCACTAATCAATTCAG  300
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAGCTAAATGGGGATCTAATATTTACT-CGTTTCTCACTAATCAATTCAG  276

seq1  GCACTGGTGGAATGGCTTTAGAAAATTGTGACTTTTCTTTTATACTTGGG  350
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCACTGGTGGAATGGCTTTAGAAAATTGTGAC-TTTCTTTTATACTTGGG  325

seq1  CTTCTTCCAGAATTTATTTTGAAGCAAGTTCACATTTGCATTCAAATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCCAGAATTTATTTTGAAGCAAGTTCACATTTGCATTCAAATATG  375

seq1  AGTATGTATATCATTTACATACCCATTTCTGTTTTCTAGGAAATCAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTATATCATTTACATACCCATTTCTGTTTTCTAGGAAATCAGACA  425

seq1  CGGACTCTGTTGTGCTGGATGCGAGAAATTTTTATCTACAGTGTTCACGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTCTGTTGTGCTGGATGCGAGAAATTTTTATCTACAGTGTTCACGT  475

seq1  GCTGCTTAAAGTGAGTAAATCCTCTTTGACAGTTGAGAGAAAGGTTACGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTAAAGTGAGTAAATCCTCTTTGACAGTTGAGAGAAAGGTTACGT  525

seq1  TGTCCAGGAAGAACAAACCAAAGATGTTTGTGTGAACTTGCAGAACATCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGGAAGAACAAACCAAAGATGTTTGTGTGAACTTGCAGAACATCG  575

seq1  CCTTCACATGGCTTCTTTTAATCAGAACGTGTTCTTCATTATAACACCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACATGGCTTCTTTTAATCAGAACGTGTTCTTCATTATAACACCAC  625

seq1  AATTTTCATGTCACCGCGAGAGTATTATTCTAAGTTAACCACATGGTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCATGTCACCGCGAGAGTATTATTCTAAGTTAACCACATGGTGAT  675

seq1  TATATTAAACAAAATATTGTTTCTTGGGGTTAATAAAATGAAATCCTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAAACAAAATATTGTTTCTTGGGGTTAATAAAATGAAATCCTTAC  725

seq1  ATGAGCATTGTCGTGACTTGACAGATAAATAGTTCTGACACATACAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCATTGTCGTGACTTGACAGATAAATAGTTCTGACACATACAATAT  775

seq1  TCAAGATTCTCAGCCTGACTGTTCATAAGATAAGTGCATGCTATTATCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATTCTCAGCCTGACTGTTCATAAGATAAGTGCATGCTATTATCTT  825

seq1  TTCATAGATTCTGACCACTGTGTTCTTTGCATAATGCAGCTGCTTCTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGATTCTGACCACTGTGTTCTTTGCATAATGCAGCTGCTTCTTTT  875

seq1  AAATGTTATATATTATAATTAGATTTAAGTTGAATCAAATAGCTGGACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTATATATTATAATTAGATTTAAGTTGAATCAAATAGCTGGACAC  925

seq1  TGTTGGGGACTGGGCTACCTCCTTAATTACAATGAATATTTATGTTACTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGGACTGGGCTACCTCCTTAATTACAATGAATATTTATGTTACTA  975

seq1  TATATTCCCAAACCACATTTTTATTTATGAACTCATTCAATTGCAACATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCCCAAACCACATTTTTATTTATGAACTCATTCAATTGCAACATA  1025

seq1  GGTTTTCTTTGCACATTCCTCTCACAGAAAGTGGTTAAGAAAACATAAAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCTTTGCACATTCCTCTCACAGAAAGTGGTTAAGAAAACATAAAC  1075

seq1  TATCTTCCACAAAATCAAGATATGAGCCAATATTCTTATGAGTTAGAAGT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCCACAAAATCAAGATATGAGCCAATATTCTTATGAGTTAGAAGT  1125

seq1  TGTGGTCAAGGAGGAATCAACTTTAAAATGAATTTTGCTTGTATCCATTT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCAAGGAGGAATCAACTTTAAAATGAATTTTGCTTGTATCCATTT  1175

seq1  TATGAAGCTACAAGAATTC  1219
      |||||||||||||||||||
seq2  TATGAAGCTACAAGAATTC  1194

seq1: chr15_24709084_24710247
seq2: B6Ng01-068E13.g_72_1229

seq1  GAATTCTAGTGGAGCAGAAAGGAGTTTGAGATTAAGGTAGACAGGAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTGGAGCAGAAAGGAGTTTGAGATTAAGGTAGACAGGAGGGA  50

seq1  AAGTACAAATGTCAAGGGGTTTCTATTCTGAAGGAAATAAAATGCCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACAAATGTCAAGGGGTTTCTATTCTGAAGGAAATAAAATGCCTGGA  100

seq1  CCCCTACCCCATTCTCCAGGTAAGGCTCTAAGACTCCAGCCATCAACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACCCCATTCTCCAGGTAAGGCTCTAAGACTCCAGCCATCAACTTC  150

seq1  ACACTTCCCTACTGCCTACCCAAGAACCCCATTTCATGCCTTCCTGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCCCTACTGCCTACCCAAGAACCCCATTTCATGCCTTCCTGTCCA  200

seq1  CGTCTCCCCTCTAGACAGTGGGGAATTGGTTGTGAGAATATTATAATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCCCCTCTAGACAGTGGGGAATTGGTTGTGAGAATATTATAATTCT  250

seq1  ACAGATGGTCTGTTCCTGGGATAATAAGCTCCACTTAGCCCTCACCAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGGTCTGTTCCTGGGATAATAAGCTCCACTTAGCCCTCACCAAGC  300

seq1  TGAGACTGCTTTTAATTTTCCATTCAGAAATTAACACTGAGTGGTTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTGCTTTTAATTTTCCATTCAGAAATTAACACTGAGTGGTTCCAA  350

seq1  GATTTACCTATAACCCATAATCAGTTAAGAATGTGTTTACAAGTCTGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACCTATAACCCATAATCAGTTAAGAATGTGTTTACAAGTCTGGGT  400

seq1  AACAGCAATCAGAGACCCAAACATTCAACAAACAGGAATATCTATCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAATCAGAGACCCAAACATTCAACAAACAGGAATATCTATCTACA  450

seq1  GCCATATATCTACGTCTTTATCTCTGTCTCCATCTCCATCTCTCTATCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATATATCTACGTCTTTATCTCTGTCTCCATCTCCATCTCTCTATCTC  500

seq1  TATCTTCATCTCCATCTCCATCTCTCTATCTCTATCTTCATCTCCATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCATCTCCATCTCCATCTCTCTATCTCTATCTTCATCTCCATCTC  550

seq1  TCTATCTCTATCTCTATATCTATCTCTATATCTATATCTACTTATAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTCTATCTCTATATCTATCTCTATATCTATATCTACTTATAACAA  600

seq1  AAATCATTACCAATGACTGGTTGGTGACATCTGAACAGATGTCTAGGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTACCAATGACTGGTTGGTGACATCTGAACAGATGTCTAGGTCC  650

seq1  TATTACAGAACAAAAATAGGACAATATATCATCTCCAAAAATTGGTACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAGAACAAAAATAGGACAATATATCATCTCCAAAAATTGGTACTA  700

seq1  AGTTACTAATAATCCC-AAAGTTAATTTACGTGGCATTCAAGACAATAAT  749
      |||||||||||||||| ||| |||||||||||||||||||||||||||||
seq2  AGTTACTAATAATCCCAAAATTTAATTTACGTGGCATTCAAGACAATAAT  750

seq1  TTCAAAATACTAATAACAAATATGTTCAAAAAA-TTCAAAAAGTATATGA  798
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCAAAATACTAATAACAAATATGTTCAAAAAATTTCAAAAAGTATATGA  800

seq1  ACCAATGCCTAAATGAAGACAATAATTCACAAGCAG-TTAGATACCATAC  847
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACCAATGCCTAAATGAAGACAATAATTCACAAGCAGTTTAGATACCATAC  850

seq1  TGAAAACAACTCAAGATATGAGAATATATGAGACATAGTCCTTAATGCAA  897
      || ||||||||| |||||||||||||||||||||||||| ||||||||||
seq2  TG-AAACAACTC-AGATATGAGAATATATGAGACATAGT-CTTAATGCAA  897

seq1  AAACAAATTGAATTAAAATTGAACTTTAAAGTTCAGGAAATAAAATAAAT  947
      ||||||||||||||||||||| || |||||||||||| ||||||||||||
seq2  AAACAAATTGAATTAAAATTG-ACCTTAAAGTTCAGG-AATAAAATAAAT  945

seq1  GCTCAAATGAAATCCCAATTAGTAAATTGGGTCAAATGTAAGAGGATACC  997
      |||  ||||||||||| |||||| ||||||||||||||||||||||||||
seq2  GCTTCAATGAAATCCCCATTAGT-AATTGGGTCAAATGTAAGAGGATACC  994

seq1  TGTTCTTGAAGGCAAGGAAGAATTGGA--TCACA-CAGTGTTCTGGATAG  1044
      || ||||||||||||||||| ||||||   |||| |||||||| ||||||
seq2  TGCTCTTGAAGGCAAGGAAGGATTGGAATCCACACCAGTGTTCCGGATAG  1044

seq1  ATTTATGTCAATTTGACATAAGCAATGGTCATCTGGGATTAAGACA-ATG  1093
      | ||||||| ||||||| |||||||||||||||||||||||||||| | |
seq2  A-TTATGTC-ATTTGACCTAAGCAATGGTCATCTGGGATTAAGACATAGG  1092

seq1  CCTCCATGCAATCAGTCTGGACACAAACCTGTAGGATATTTTATTAATTA  1143
       |||||| ||||||| || ||||| ||||||   || | |||| |||| |
seq2  TCTCCATTCAATCAG-CTTGACACCAACCTG--AGAAACTTTA-TAATGA  1138

seq1  GTGATTGATGCTAGAGTGACC  1164
      |  | ||||||||||||||||
seq2  GATA-TGATGCTAGAGTGACC  1158