BAC Information

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BAC

Clone NameB6Ng01-068L04
Chromosome15 (Build37)
Map Location 6,312,478 - 6,473,165
singlet/doubletdoublet
Overlap geneDab2, C9
Upstream geneLOC666291, LOC666319, LOC100039358, LOC666323
Downstream geneLOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik, Osmr, Lifr, Egflam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068L04.bB6Ng01-068L04.g
ACCDH887209DH887210
length1,154743
definitionDH887209|Mus musculus domesticus DNA, BAC clone: B6Ng01-068L04, 5' end.DH887210|Mus musculus domesticus DNA, BAC clone: B6Ng01-068L04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,471,979 - 6,473,165)(6,312,478 - 6,313,216)
sequence
gaattcaacttttctttctgtgaggcagatactttcctcccttctgacag
ctagaatctgaaaagggaacttccaaagcctcgatctcaaagggcagagt
agacatagcaacttcctcaccacaaggacggcagtgggcatgtgccaatc
ccaaaggcagtgagaacatgggcatgagccccctctcccccagtacagaa
gatcagcgtgtttgcctggagaccagagagggttgtaaaatccaagactt
accatgtttattggaaagagccgatgcgccttgcactccgtgaccctgca
gatgctgtgactccggcagtgaatgtgcaagttagctgtgaagagcagct
acttccttttctgagcagtgtggtctaaccagccttcacacattgatatg
gaagggccctatttgcattttatctcagcccaggaacattgtatggctgg
ccttgtttctctttgttataattgataacacaagagaagggatagacgaa
gctttgagggctgaaagattaatgcctaaatgaaaaagtatctgaatact
aaataataataatactatctatctatctatctatctatctatctatctat
ctatctatctatctatctatcttctatgtatctatcatcatatgtctctc
tatcaatcatccatctatccatatctatcaatctaatatctatccattta
tatccattcatccatccgtccatgcatccatccatgaaggacccacacta
agatgttggtagtgattggcttagctggaggtacaagtcattcttgtttt
gttctatactcttggttcccaaggtttcagactagaacacataccacttg
agtaaacaaacaaacaacaacaaacaaagacaaacaaaaaactaaaaaac
ccaaacaaactataaaaattttttaaaataaaagtatcttgagcacttaa
tggacactctaatatattagaacccatgccgggaatttaagtggcagaaa
tattcatttaggttatcgagattgcattcatttcattcaaaaacaagtga
tggactttaagcgatgtgttgctaatgtggaagtatctcgaagatcaaat
gctcctgccaaatgctaaaacaataattagactagatgtagttctgattt
attt

gaattcttctggaatgggtttgatgtattccctctaccctttgggtactt
catacttttgaacctctaatcactttctccattgatttagttataaataa
agttcttgtctctggtagtaatgacaggaaagtcagaataatgataggga
ttgctattccattttaggtgagtactgggactttggaagaaccgggctat
ctgaattccctcctcagggaatggaatctacccactggtctgtccagctc
tatcactctagctgtgtctgtgtttctgcttagtgtcctgcttctactgg
gttccctacttgtatgtgagatctttattcctttgccttaataaagtggt
ggctataccatcatccatatcccaccattcagtgctgcactcaggtagtt
tacctgccaaagcccctatcctgtactggtgccttcaaggttaacattcc
tttattcacatcataagtttagtgagggcttctctcatttgaagaagggg
cccagggcaggccatggctgctccattctctaaatgagcaaggcagtctg
cagaccactgaggatcctcattctaacagactgactcagttgatgataaa
gttcaaaggcaaaacataaagggcttgtggctttgagtaaaacaagcata
taagttcaatttttccttctttcactaagtactgtatttgcaatttaaat
atttgcagtgtttttagctcaaaagaattctcttatcactaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_6471979_6473165
seq2: B6Ng01-068L04.b_49_1202 (reverse)

seq1  AAATAAAATCCAGTGAACTACATCTAGTCTAAAATATATGTTTTTAGCAA  50
      |||| |||||    ||||||||||||||||||    |||  |||||||| 
seq2  AAAT-AAATC---AGAACTACATCTAGTCTAA---TTATTGTTTTAGCA-  42

seq1  TTTGGGCAATGGAAGCACTTGGTACTTACGAGGAATAC-TCCACAATTAG  99
       || ||||   | |||| ||| | ||| ||||  |||| ||||| |||||
seq2  -TTTGGCA---GGAGCATTTGAT-CTT-CGAG--ATACTTCCAC-ATTAG  83

seq1  CAAACACATCGCTTAAAGTCACATTCACTATGTTTTCTGAATGAAATGAA  149
      | |||||||||||||||||| || ||||| |||||| |||||||||||||
seq2  C-AACACATCGCTTAAAGTC-CA-TCACT-TGTTTT-TGAATGAAATGAA  128

seq1  TGGCATTCTGCGATAAACTTAATGAATATTTCTGCCACTTAAATTCCACG  199
      | ||| ||| |||||| || ||||||||||||||||||||||||||| ||
seq2  T-GCAATCT-CGATAACCTAAATGAATATTTCTGCCACTTAAATTCC-CG  175

seq1  GCATGGGTTCTAATATATTAGAGTTGTCCATTAAGTGCTCAAGATACTTT  249
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GCATGGGTTCTAATATATTAGAG-TGTCCATTAAGTGCTCAAGATACTTT  224

seq1  TATTTTTAAAAAATTTTTATAGTTTTGTTTTGGGTTTTTTTTGTTTTTTT  299
      || ||||||||||||||||||| |||||||  || |||||| ||||||| 
seq2  TA-TTTTAAAAAATTTTTATAG-TTTGTTT--GGGTTTTTTAGTTTTTT-  269

seq1  GTTTTGTCTTTGTTTGTTTGTTTGTTTGTTTGTTTACTCAAGTGGTATGT  349
        ||||||||||||||||   |||||||||||||||||||||||||||||
seq2  -GTTTGTCTTTGTTTGTT--GTTGTTTGTTTGTTTACTCAAGTGGTATGT  316

seq1  GTTCTAGTCTGAAACCTTGGGAACCAAGAGTATAGAACAAAACAAGAATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGTCTGAAACCTTGGGAACCAAGAGTATAGAACAAAACAAGAATG  366

seq1  ACTTGTACCTCCAGCTAAGCCAATCACTACCAACATCTTAGTGTGGGTCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTACCTCCAGCTAAGCCAATCACTACCAACATCTTAGTGTGGGTCC  416

seq1  TTCATGGATGGATGCATGGACGGATGGATGAATGGATATAAATGGATAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGATGGATGCATGGACGGATGGATGAATGGATATAAATGGATAGA  466

seq1  TATTAGATTGATAGATATGGATAGATGGATGATTGATAGAGAGACATATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGATTGATAGATATGGATAGATGGATGATTGATAGAGAGACATATG  516

seq1  ATGATAGATACATAGAAGATAGATAGATAGATAGATAGATAGATAGATAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGATACATAGAAGATAGATAGATAGATAGATAGATAGATAGATAG  566

seq1  ATAGATAGATAGATAGATAGATAGTATTATTATTATTTAGTATTCAGATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGATAGATAGATAGATAGTATTATTATTATTTAGTATTCAGATA  616

seq1  CTTTTTCATTTAGGCATTAATCTTTCAGCCCTCAAAGCTTCGTCTATCCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCATTTAGGCATTAATCTTTCAGCCCTCAAAGCTTCGTCTATCCC  666

seq1  TTCTCTTGTGTTATCAATTATAACAAAGAGAAACAAGGCCAGCCATACAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTGTGTTATCAATTATAACAAAGAGAAACAAGGCCAGCCATACAA  716

seq1  TGTTCCTGGGCTGAGATAAAATGCAAATAGGGCCCTTCCATATCAATGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTGGGCTGAGATAAAATGCAAATAGGGCCCTTCCATATCAATGTG  766

seq1  TGAAGGCTGGTTAGACCACACTGCTCAGAAAAGGAAGTAGCTGCTCTTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCTGGTTAGACCACACTGCTCAGAAAAGGAAGTAGCTGCTCTTCA  816

seq1  CAGCTAACTTGCACATTCACTGCCGGAGTCACAGCATCTGCAGGGTCACG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAACTTGCACATTCACTGCCGGAGTCACAGCATCTGCAGGGTCACG  866

seq1  GAGTGCAAGGCGCATCGGCTCTTTCCAATAAACATGGTAAGTCTTGGATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCAAGGCGCATCGGCTCTTTCCAATAAACATGGTAAGTCTTGGATT  916

seq1  TTACAACCCTCTCTGGTCTCCAGGCAAACACGCTGATCTTCTGTACTGGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACCCTCTCTGGTCTCCAGGCAAACACGCTGATCTTCTGTACTGGG  966

seq1  GGAGAGGGGGCTCATGCCCATGTTCTCACTGCCTTTGGGATTGGCACATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGGGGCTCATGCCCATGTTCTCACTGCCTTTGGGATTGGCACATG  1016

seq1  CCCACTGCCGTCCTTGTGGTGAGGAAGTTGCTATGTCTACTCTGCCCTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGCCGTCCTTGTGGTGAGGAAGTTGCTATGTCTACTCTGCCCTTT  1066

seq1  GAGATCGAGGCTTTGGAAGTTCCCTTTTCAGATTCTAGCTGTCAGAAGGG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCGAGGCTTTGGAAGTTCCCTTTTCAGATTCTAGCTGTCAGAAGGG  1116

seq1  AGGAAAGTATCTGCCTCACAGAAAGAAAAGTTGAATTC  1187
      ||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGTATCTGCCTCACAGAAAGAAAAGTTGAATTC  1154


seq1: chr15_6312478_6313216
seq2: B6Ng01-068L04.g_70_812

seq1  GAATTCTTCTGGAATGGGTTTGATGTATTCCCTCTACCCTTTGGGTACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGGAATGGGTTTGATGTATTCCCTCTACCCTTTGGGTACTT  50

seq1  CATACTTTTGAACCTCTAATCACTTTCTCCATTGATTTAGTTATAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTTTGAACCTCTAATCACTTTCTCCATTGATTTAGTTATAAATAA  100

seq1  AGTTCTTGTCTCTGGTAGTAATGACAGGAAAGTCAGAATAATGATAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTGTCTCTGGTAGTAATGACAGGAAAGTCAGAATAATGATAGGGA  150

seq1  TTGCTATTCCATTTTAGGTGAGTACTGGGACTTTGGAAGAACCGGGCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATTCCATTTTAGGTGAGTACTGGGACTTTGGAAGAACCGGGCTAT  200

seq1  CTGAATTCCCTCCTCAGGGAATGGAATCTACCCACTGGTCTGTCCAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTCCCTCCTCAGGGAATGGAATCTACCCACTGGTCTGTCCAGCTC  250

seq1  TATCACTCTAGCTGTGTCTGTGTTTCTGCTTAGTGTCCTGCTTCTACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTCTAGCTGTGTCTGTGTTTCTGCTTAGTGTCCTGCTTCTACTGG  300

seq1  GTTCCCTACTTGTATGTGAGATCTTTATTCCTTTGCCTTAATAAAGTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCTACTTGTATGTGAGATCTTTATTCCTTTGCCTTAATAAAGTGGT  350

seq1  GGCTATACCATCATCCATATCCCACCATTCAGTGCTGCACTCAGGTAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATACCATCATCCATATCCCACCATTCAGTGCTGCACTCAGGTAGTT  400

seq1  TACCTGCCAAAGCCCCTATCCTGTACTGGTGCCTTCAAGGTTAACATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGCCAAAGCCCCTATCCTGTACTGGTGCCTTCAAGGTTAACATTCC  450

seq1  TTTATTCACATCATAAGTTTAGTGAGGGCTTCTCTCATTTGAAGAAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCACATCATAAGTTTAGTGAGGGCTTCTCTCATTTGAAGAAGGGG  500

seq1  CCCAGGGCAGGCCATGGCTGCTCCATTCTCTAAATGAGCAAGGCAGTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGCAGGCCATGGCTGCTCCATTCTCTAAATGAGCAAGGCAGTCTG  550

seq1  CAGACCACTGAGGATCCTCATTCTAACAGACTGACTCAGTTGATGATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCACTGAGGATCCTCATTCTAACAGACTGACTCAGTTGATGATAAA  600

seq1  GTTCAAAGGCAAAACATAAAGGGCTTGGGGC-TTGAGTAAAACAAGCATA  649
      ||||||||||||||||||||||||||| ||| ||||||||||||||||||
seq2  GTTCAAAGGCAAAACATAAAGGGCTTGTGGCTTTGAGTAAAACAAGCATA  650

seq1  TAAGTTCAA-TTTTCCTTCTTTCACTAAGTACTGTATTTGCAATTT-AAT  697
      ||||||||| |||||||||||||||||||||||||||||||||||| |||
seq2  TAAGTTCAATTTTTCCTTCTTTCACTAAGTACTGTATTTGCAATTTAAAT  700

seq1  ATTTGCAGTG-TTTTAGCTC-AAAGAATTCTCTTATCACATACA  739
      |||||||||| ||||||||| |||||||||||||||||| ||||
seq2  ATTTGCAGTGTTTTTAGCTCAAAAGAATTCTCTTATCAC-TACA  743


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