BAC Information

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BAC

Clone NameB6Ng01-068M03
Chromosome15 (Build37)
Map Location 53,900,723 - 53,901,848
singlet/doubletsinglet
Overlap geneEG621631
Upstream geneExt1, Samd12, EG665097
Downstream geneTnfrsf11b, LOC665280, EG383032, Colec10, Mal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068M03.bB6Ng01-068M03.g
ACCDH887252DH887253
length1,1101,163
definitionDH887252|Mus musculus domesticus DNA, BAC clone: B6Ng01-068M03, 5' end.DH887253|Mus musculus domesticus DNA, BAC clone: B6Ng01-068M03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatctccatgtaaatcagcctcgctgccaaggcatggactccgca
agcctccctggtaaagaccggctcctggtgttaagtgcctactgccaaaa
cgcagtgtggtgtgactgccatctgctggcagggctctggcattacagaa
tgggctaccatgaactttcttggctgaagcactcctttgcaaaacataag
ctttttctggagaaataaaagacccagtttgatcataaattttgtccaca
ttcaacaccaaaatccccatgcattttgaggaagaactacagaatcagta
gaagattgattctggattgtggtgtgctttccaattctaaatccagtgaa
acaatgggttgttagctactaaccccctattttcatcagctactaagttc
cctcagcaaaagcccagaagcagtgctgattccgagagttcttgcgctat
gaaggccatcaagagctaaatcacttgtcgtcttcctcatcagccatcac
tattaaaaaaaatcgtttctccttaagagaagattgtgtttcttagaacc
caaataacaaaacattaagcattgaagtttagaagatgagagggtttttt
ctcgttatataaggcacatctccatgtttaatgataagaactaagtgttg
ttcttgcatcaagcatattcttgaaatcagaagcagatacttgctcgttc
atgatgccggttcttccaactcgtacctgtacagtttatggaacctcaca
attggaaggcacgtggtcgattgtagtggatgctgctactcatttctatg
tgtaagaatgagaacttgatactcaatgtgaatggagtacaacagggatg
aatttcccataaagggcagtgccccaccaccatcaccaccaccactgtag
gataaaccaaacttcttgaaagagccttaccatggtagaagcaactaatg
taactcagaactcattgatgttcattagccgagatttctttactaaaggg
cgtgggagtgagatctatgtcttacgaaatcaatggtgctccaattttat
taagtcaactataaaccaatgacctctttcttctgaaacatcattctcat
tctgaaacat
gaattcttcatgcaaatgaggtacttagaagccctgagggtttagctaat
aagtttccctcctttgatattcccccctgcaaaagctatttctgctctag
ttccacattttcacgatgaacagccaataaatggtatggataaacgtgta
ttgtctcttccatcaaaactacagtggggagcattgagaaggccttcacc
cacagagccacagcccaagtttcctgtagaagatctatctgcacttccag
agaaccaccacctccaagctaaggactttcacagatgagctaagccagag
ttctccatttccccagcgccaggttctttattgtcttcagcccacaggcc
cacaatggtccaggtctcatggacccccaatctttagttcctgacttcct
ctgtgcggcattctagcagacactaatgtctgagagtcagggaatcccca
actttgcgcaccctcccatcttagacttttttcctatccccagagctgtt
tccgcacttccctaaagccctgcacccaatgactgtggtacagggagaca
cagtcaagcactccccacattttgtttcttccatctgcttgtctcagaag
ctattgaccacctgtagatcttcatctagtggtgagaccctgtgaagttt
ctccatccattttgacatgccaactggtattgctagtgccaagcatagga
aaccttcccttgagttgtggatcataggaatacaagagtgtcccaaaaca
atacaggcttctacaacagttcttagttatctttcagagtttaaagaaaa
gaccctgtctctaaatataccacatgctttagtcacaagatttagatagt
ccaagctgaaactgacctgaaagcttccacctggcatggctctttgagta
gcaaaagatgatatgcagtcttcaaggtaatagaaaatccatagcctacc
cagctgtaaagtctatgatcacacataactagactacacacatccccagt
ggtacatattggcactgttttcttttgggtattaaagtgtctattaaact
tgagttcctgcattgacgcattatctaacctatgacctagtcacttatca
tgctcggatcagcactaggtaaactacctaatcccatctaaacaatgaat
tcgacgtgatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_53900723_53901848
seq2: B6Ng01-068M03.b_43_1152 (reverse)

seq1  ATGTTTCAGGAATGGAAGAAATGATGTTTTCAGAAGTATAGA-GTCATTT  49
      |||||||| |||||  || ||||||| ||||||||| | ||| |||| ||
seq2  ATGTTTCA-GAATG--AG-AATGATG-TTTCAGAAG-AAAGAGGTCA-TT  43

seq1  GGTTTATAAATTTGACTTTAATAAAATTGGAAGCACCCTTTTGATTTCTG  99
      |||||||  | ||||| ||||||||||||| ||||||   |||||||| |
seq2  GGTTTAT--AGTTGAC-TTAATAAAATTGG-AGCACC--ATTGATTTC-G  86

seq1  TAAGAACATAGATCTCACTCCCACGCCCTTTAGTAAAGAAATCTCGGCTA  149
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAG-ACATAGATCTCACTCCCACGCCCTTTAGTAAAGAAATCTCGGCTA  135

seq1  ATGAACATCAATGAGTTTCTGTGTTACATTAGTTGCTTCTAACATGGTAA  199
      ||||||||||||||| ||||| ||||||||||||||||||| ||||||||
seq2  ATGAACATCAATGAG-TTCTGAGTTACATTAGTTGCTTCTACCATGGTAA  184

seq1  GGCTCTTTCAAGAAGTTTGGTTTTATCCTACAGTGGTGGTGGTGGTGGTG  249
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  GGCTCTTTCAAGAAGTTTGG-TTTATCCTACAGTGGTGGTGGTGATGGTG  233

seq1  GTGGGGCACTGCCCTTTATGGGAAATTCATCCCTGTTGTACTCCATTCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGCACTGCCCTTTATGGGAAATTCATCCCTGTTGTACTCCATTCAC  283

seq1  ATTGAGTATCAAGTTCTCATTCTTACACATAGAAATGAGTAGCAGCATCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTATCAAGTTCTCATTCTTACACATAGAAATGAGTAGCAGCATCC  333

seq1  ACTACAATCGACCACGTGCCTTCCAATTGTGAGGTTCCATAAACTGTACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAATCGACCACGTGCCTTCCAATTGTGAGGTTCCATAAACTGTACA  383

seq1  GGTACGAGTTGGAAGAACCGGCATCATGAACGAGCAAGTATCTGCTTCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACGAGTTGGAAGAACCGGCATCATGAACGAGCAAGTATCTGCTTCTG  433

seq1  ATTTCAAGAATATGCTTGATGCAAGAACAACACTTAGTTCTTATCATTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAGAATATGCTTGATGCAAGAACAACACTTAGTTCTTATCATTAA  483

seq1  ACATGGAGATGTGCCTTATATAACGAGAAAAAACCCTCTCATCTTCTAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAGATGTGCCTTATATAACGAGAAAAAACCCTCTCATCTTCTAAA  533

seq1  CTTCAATGCTTAATGTTTTGTTATTTGGGTTCTAAGAAACACAATCTTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATGCTTAATGTTTTGTTATTTGGGTTCTAAGAAACACAATCTTCT  583

seq1  CTTAAGGAGAAACGATTTTTTTTAATAGTGATGGCTGATGAGGAAGACGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGAGAAACGATTTTTTTTAATAGTGATGGCTGATGAGGAAGACGA  633

seq1  CAAGTGATTTAGCTCTTGATGGCCTTCATAGCGCAAGAACTCTCGGAATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGATTTAGCTCTTGATGGCCTTCATAGCGCAAGAACTCTCGGAATC  683

seq1  AGCACTGCTTCTGGGCTTTTGCTGAGGGAACTTAGTAGCTGATGAAAATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGCTTCTGGGCTTTTGCTGAGGGAACTTAGTAGCTGATGAAAATA  733

seq1  GGGGGTTAGTAGCTAACAACCCATTGTTTCACTGGATTTAGAATTGGAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTTAGTAGCTAACAACCCATTGTTTCACTGGATTTAGAATTGGAAA  783

seq1  GCACACCACAATCCAGAATCAATCTTCTACTGATTCTGTAGTTCTTCCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCACAATCCAGAATCAATCTTCTACTGATTCTGTAGTTCTTCCTC  833

seq1  AAAATGCATGGGGATTTTGGTGTTGAATGTGGACAAAATTTATGATCAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCATGGGGATTTTGGTGTTGAATGTGGACAAAATTTATGATCAAA  883

seq1  CTGGGTCTTTTATTTCTCCAGAAAAAGCTTATGTTTTGCAAAGGAGTGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCTTTTATTTCTCCAGAAAAAGCTTATGTTTTGCAAAGGAGTGCT  933

seq1  TCAGCCAAGAAAGTTCATGGTAGCCCATTCTGTAATGCCAGAGCCCTGCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCAAGAAAGTTCATGGTAGCCCATTCTGTAATGCCAGAGCCCTGCC  983

seq1  AGCAGATGGCAGTCACACCACACTGCGTTTTGGCAGTAGGCACTTAACAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATGGCAGTCACACCACACTGCGTTTTGGCAGTAGGCACTTAACAC  1033

seq1  CAGGAGCCGGTCTTTACCAGGGAGGCTTGCGGAGTCCATGCCTTGGCAGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCCGGTCTTTACCAGGGAGGCTTGCGGAGTCCATGCCTTGGCAGC  1083

seq1  GAGGCTGATTTACATGGAGATGAATTC  1126
      |||||||||||||||||||||||||||
seq2  GAGGCTGATTTACATGGAGATGAATTC  1110