BAC Information

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BAC

Clone NameB6Ng01-068O12
Chromosome15 (Build37)
Map Location 25,366,171 - 25,367,199
singlet/doubletsinglet
Overlap geneLOC100040583
Upstream geneLOC666999, LOC100040492, LOC100040499, LOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939
Downstream geneMyo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622, AK162044
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068O12.bB6Ng01-068O12.g
ACCDH887363DH887364
length2571,026
definitionDH887363|Mus musculus domesticus DNA, BAC clone: B6Ng01-068O12, 5' end.DH887364|Mus musculus domesticus DNA, BAC clone: B6Ng01-068O12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttaagactttgtcaatatcaaccaaccagtatccccagagttcccaggg
actaaaccaccaaccaaagaatacatatgaagggacccatggctccagct
gcatatgtagcagaagatggtcttatctggcatcaatgggaggggaggcc
cttggtccttgaaggtttgatgccccagagtagggaatgctagggcgggg
agtgggaagtgagggggaagcaccctcatagaagcagggggagggtgggg
tagggag

gaattctgtaatttaggtaatatcctctgactaagagcatcaagacccca
cttatatctgtgtaaccctgaaagtagggtttccaacagaactgtgtcgt
gtaggagggaacaaaaaagctgctactaattattatgtatgtgctgtagg
taactacacttacaggtgaggccaggatgctatgccttcttggtagctac
actcacaggccagggaagtgtgctttgtgctgttggtagatacactgtca
gaggtcactgtgctgtgtcctaggtagatacactcacaggtcactgttct
gtgtcctggggagatacactgtcagaggtcactgtgctgtgtcctaggta
gatacactcacaggtcactgtgctgtgttctaggtagatacactcacagg
tcactgtgctgtgtcctaggtagatacactgtcacaggtcactgtgctgt
gtcctgggtagatacactgtcacaggtcactgtgctgtgtcctaggtaga
tacactcacaggtcactgtgctgtgtcctgggtagatacactgtcacagg
tcactgtgctgtgtcctggggagatacactgtcacaggtcactgtgctgt
gtcctaggtagatacactcacatgtcactgtgctgtgtcctggggagata
gactgtcacaggtcactgtgctgtgtcctgggtagatagactgtcatagg
tcactgtgctgtgtcctaggtagatatactcacaggtcactgtgctgtgt
cctgggtagatacactgtcacaggtcactgtgctgtgtccctggggagac
tgtcacaggtcactgtgctgtgtcctgggtagatacactgtcacaggtca
ctgtgctgtgttcctggggagactgtcacaggtcattgtgctgtgtcctg
ggtagatagactgtcaaaggtcactgtgctgggtcctgggtagatacact
gtcacaggtactgggctgtgtcctggtagatacactgtacagtcactttg
tttgtcttggggaaactgtcacaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25366171_25367199
seq2: B6Ng01-068O12.g_69_1094 (reverse)

seq1  ACCTGTGACAGTCTCCCCAGGACACAGCACAGTGACCTGTGACAGTGTAT  50
      |||||||||||| |||||| |||| | || ||||| |||| |||||||||
seq2  ACCTGTGACAGTTTCCCCAAGACA-AACAAAGTGA-CTGT-ACAGTGTAT  47

seq1  CTACCCAGGACACAGCACAGTGACCTGTGACAGTGTATCTACCCAGGACA  100
      ||| |||||||||||| |||| ||||||||||||||||||||||||||| 
seq2  CTA-CCAGGACACAGCCCAGT-ACCTGTGACAGTGTATCTACCCAGGACC  95

seq1  CAGCACAGTGACCTTTGACAGTCTATCTACCCAGGACACAGCACAGTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAGCACAGTGACCTTTGACAGTCTATCTACCCAGGACACAGCACAATGAC  145

seq1  CTGTGACAGTCTCCCCAGG-ACACAGCACAGTGACCTGTGACAGTGTATC  199
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTGTGACAGTCTCCCCAGGAACACAGCACAGTGACCTGTGACAGTGTATC  195

seq1  TACCCAGGACACAGCACAGTGACCTGTGACAGTCTCCCCA-GGACACAGC  248
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TACCCAGGACACAGCACAGTGACCTGTGACAGTCTCCCCAGGGACACAGC  245

seq1  ACAGTGACCTGTGACAGTGTATCTACCCAGGACACAGCACAGTGACCTGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGACCTGTGACAGTGTATCTACCCAGGACACAGCACAGTGACCTGT  295

seq1  GAGTATATCTACCTAGGACACAGCACAGTGACCTATGACAGTCTATCTAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATATCTACCTAGGACACAGCACAGTGACCTATGACAGTCTATCTAC  345

seq1  CCAGGACACAGCACAGTGACCTGTGACAGTCTATCTCCCCAGGACACAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACACAGCACAGTGACCTGTGACAGTCTATCTCCCCAGGACACAGC  395

seq1  ACAGTGACATGTGAGTGTATCTACCTAGGACACAGCACAGTGACCTGTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGACATGTGAGTGTATCTACCTAGGACACAGCACAGTGACCTGTGA  445

seq1  CAGTGTATCTCCCCAGGACACAGCACAGTGACCTGTGACAGTGTATCTAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTATCTCCCCAGGACACAGCACAGTGACCTGTGACAGTGTATCTAC  495

seq1  CCAGGACACAGCACAGTGACCTGTGAGTGTATCTACCTAGGACACAGCAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACACAGCACAGTGACCTGTGAGTGTATCTACCTAGGACACAGCAC  545

seq1  AGTGACCTGTGACAGTGTATCTACCCAGGACACAGCACAGTGACCTGTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCTGTGACAGTGTATCTACCCAGGACACAGCACAGTGACCTGTGA  595

seq1  CAGTGTATCTACCTAGGACACAGCACAGTGACCTGTGAGTGTATCTACCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTATCTACCTAGGACACAGCACAGTGACCTGTGAGTGTATCTACCT  645

seq1  AGAACACAGCACAGTGACCTGTGAGTGTATCTACCTAGGACACAGCACAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACAGCACAGTGACCTGTGAGTGTATCTACCTAGGACACAGCACAG  695

seq1  TGACCTCTGACAGTGTATCTCCCCAGGACACAGAACAGTGACCTGTGAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCTGACAGTGTATCTCCCCAGGACACAGAACAGTGACCTGTGAGT  745

seq1  GTATCTACCTAGGACACAGCACAGTGACCTCTGACAGTGTATCTACCAAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTACCTAGGACACAGCACAGTGACCTCTGACAGTGTATCTACCAAC  795

seq1  AGCACAAAGCACACTTCCCTGGCCTGTGAGTGTAGCTACCAAGAAGGCAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAAGCACACTTCCCTGGCCTGTGAGTGTAGCTACCAAGAAGGCAT  845

seq1  AGCATCCTGGCCTCACCTGTAAGTGTAGTTACCTACAGCACATACATAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCTGGCCTCACCTGTAAGTGTAGTTACCTACAGCACATACATAAT  895

seq1  AATTAGTAGCAGCTTTTTTGTTCCCTCCTACACGACACAGTTCTGTTGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTAGCAGCTTTTTTGTTCCCTCCTACACGACACAGTTCTGTTGGA  945

seq1  AACCCTACTTTCAGGGTTACACAGATATAAGTGGGGTCTTGATGCTCTTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTACTTTCAGGGTTACACAGATATAAGTGGGGTCTTGATGCTCTTA  995

seq1  GTCAGAGGATATTACCTAAATTACAGAATTC  1029
      |||||||||||||||||||||||||||||||
seq2  GTCAGAGGATATTACCTAAATTACAGAATTC  1026


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