BAC Information

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BAC

Clone NameB6Ng01-069M05
Chromosome15 (Build37)
Map Location 73,052,605 - 73,167,947
singlet/doubletdoublet
Overlap genePtk2
Upstream geneKcnk9, 1810044A24Rik, LOC665621, Peg13, LOC100041120, Chrac1, Eif2c2
Downstream geneLOC666053, LOC100040929, Dennd3, Slc45a4, Gpr20, LOC100040946, pPtp4a3, Gm628, LOC100041273, EG625276, LOC100040966, EG666113, LOC100041307
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069M05.bB6Ng01-069M05.g
ACCDH887971DH887972
length1,054945
definitionDH887971|Mus musculus domesticus DNA, BAC clone: B6Ng01-069M05, 5' end.DH887972|Mus musculus domesticus DNA, BAC clone: B6Ng01-069M05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,052,605 - 73,053,666)(73,167,004 - 73,167,947)
sequence
gaattctgtaaatattaataactctaattacatatttatttagtgtgtat
gtgtgagtgtacatgtgcatatgcacatactgtggtgtgtgagaggaggt
caggatagcctgagagagttggttttcttcctaaaccacgtgggtctcag
ggatcaagctcagctccttatcaactgcttttatccactgagccattttg
tgtgccccttcttaattttctggttagggccctacatttttttttttttt
tttttcctgttcagagccatgtggactggtcagagcggcttcttatggct
ggaaggagatctgctgtgcagtttggggtcttgcactgttttcatttgtt
gcttccacctgtggggcattgaatcaggattgagggatgcagcaacaaac
agcttaaaatctggccaaataggaaattttggacagtactatgaatagaa
ctagtcaacttccaggtaacagagtctatgtgctcacagtagggaagagt
gtagctcacaaacgctgcccagttcaccacaaggggacatcatggatgtc
ttcatagaaacttggatagacatttttttttttttttttttttttaggat
gccagagtttataaggcagcctgggccagtcagacagctcaaggctcatg
ttgccagaaaatgcagagagctttctccctggaagcctgtaagggagggg
gaagggattgccacagtaggctattctctggcaggcagccctttgctact
attccctagttccctcattggttttccttcattcggactgagtgggtcct
ctgtgagaggaacagagtaggctttatgtagtcaaggcttccacatttaa
actataaaagtcccctttttagacaattctgttcgtacagtaataagaag
cctagtacatttttaagcatggctccgaagaaaacaaggcttctcttaaa
actgcagctccagcagccctggttgctagcacttggcaaagagttcagta
gcaatcacggaaggaatcacatgccacgggcatcttgataaggcccactc
ttga
gaattctttatcactgtggtctttgataagttgtttctcagccagtaaaa
tgagccaagtcaaaccagattaaaatatatataaatgcaggtttattcgg
aagttgctcttgggtaggtgagttcagtggtcacaaggaaggaggtcagg
gaagtcgccataggaaaggagaaaggggaaagagagaaagtgcacagagg
tggggggggacagagagagagagagaaagaaaaaaatgtctgtgttatat
agcaaagagcctctgggggaatgacagctaagcctctggactggaaagtt
cagggttgggggtagggtatgccagttaggaattgaggggtgctttgaga
atctacaggccaggtctgctttggtgtgtaaaatatgcacctgaaaccag
tcttgggcagggagattctggccaactcaaggctagtttctattctaagc
ctcagtgagttggggacttaaatgcaagtacctgaagtcggctcaacagg
actcttccagacttgtgctctccaaaccccaaacataatacttatgtgtc
atttatgtcttcgcatttgtggtgatttgttatagcaccagcagggaact
aatacagttgctgtatgccatccagagataaagttctttgctttagaggg
agctttagatagacttctgggccaggtgtcaagaattctgaagctctgca
cccttattttgagatagttagcagagtgagtgagatagggaaggaaggga
aagagaagcacattgaggtgaggtcactgcccatcttagaaatagaatac
agtctgcagtgttaataggggcttttggtagtttctctagtaagaaccta
gtaataagcattgagaagatagggaagcctttcccacacatttagctgat
gtttgcatgtgttatgcctttcactgacattatcgctcatcatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_73052605_73053666
seq2: B6Ng01-069M05.b_45_1098

seq1  GAATTCTGTAAATATTAATAACTCTAATTACATATTTATTTAGTGTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAAATATTAATAACTCTAATTACATATTTATTTAGTGTGTAT  50

seq1  GTGTGAGTGTACATGTGCATATGCACATACTGTGGTGTGTGAGAGGAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGTGTACATGTGCATATGCACATACTGTGGTGTGTGAGAGGAGGT  100

seq1  CAGGATAGCCTGAGAGAGTTGGTTTTCTTCCTAAACCACGTGGGTCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATAGCCTGAGAGAGTTGGTTTTCTTCCTAAACCACGTGGGTCTCAG  150

seq1  GGATCAAGCTCAGCTCCTTATCAACTGCTTTTATCCACTGAGCCATTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAAGCTCAGCTCCTTATCAACTGCTTTTATCCACTGAGCCATTTTG  200

seq1  TGTGCCCCTTCTTAATTTTCTGGTTAGGGCCCTACATTTTTTTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCCTTCTTAATTTTCTGGTTAGGGCCCTACATTTTTTTTTTTTTT  250

seq1  TTTTTCCTGTTCAGAGCCATGTGGACTGGTCAGAGCGGCTTCTTATGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTGTTCAGAGCCATGTGGACTGGTCAGAGCGGCTTCTTATGGCT  300

seq1  GGAAGGAGATCTGCTGTGCAGTTTGGGGTCTTGCACTGTTTTCATTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGATCTGCTGTGCAGTTTGGGGTCTTGCACTGTTTTCATTTGTT  350

seq1  GCTTCCACCTGTGGGGCATTGAATCAGGATTGAGGGATGCAGCAACAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCACCTGTGGGGCATTGAATCAGGATTGAGGGATGCAGCAACAAAC  400

seq1  AGCTTAAAATCTGGCCAAATAGGAAATTTTGGACAGTACTATGAATAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAAAATCTGGCCAAATAGGAAATTTTGGACAGTACTATGAATAGAA  450

seq1  CTAGTCAACTTCCAGGTAACAGAGTCTATGTGCTCACAGTAGGGAAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCAACTTCCAGGTAACAGAGTCTATGTGCTCACAGTAGGGAAGAGT  500

seq1  GTAGCTCACAAACGCTGCCCAGTTCACCACAAGGGGACATCATGGATGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTCACAAACGCTGCCCAGTTCACCACAAGGGGACATCATGGATGTC  550

seq1  TTCATAGAAACTTGGATAGACATTTTTTTTTTTTTTTTTTTTTTTAGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGAAACTTGGATAGACATTTTTTTTTTTTTTTTTTTTTTTAGGAT  600

seq1  GCCAGAGTTTATAAGGCAGCCTGGGCCAGTCAGACAGCTCAAGGCTCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGTTTATAAGGCAGCCTGGGCCAGTCAGACAGCTCAAGGCTCATG  650

seq1  TTGCCAGAAAATGCAGAGAGCTTTCTCCCTGGAAGCCTGTAAGGGAGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGAAAATGCAGAGAGCTTTCTCCCTGGAAGCCTGTAAGGGAGGGG  700

seq1  GAAGGGATTGCCACAGTAGGCTATTCTCTGGCAGGCAGCCCTTTGCTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGATTGCCACAGTAGGCTATTCTCTGGCAGGCAGCCCTTTGCTACT  750

seq1  ATTCCCTAGTTCCCTCATTGGTTTTCCTTCATTCGGACTGAGTGGGTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTAGTTCCCTCATTGGTTTTCCTTCATTCGGACTGAGTGGGTCCT  800

seq1  CTGTGAGAGGAACAGAGTAGGCTTTATGTAGTCAGGGCTTCCACATTTAA  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTGTGAGAGGAACAGAGTAGGCTTTATGTAGTCAAGGCTTCCACATTTAA  850

seq1  ACTATAAAAAGTCCCCTTTTTAGTACAATTCTGTTCGTACAGTAATAAGA  900
      ||||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACTAT-AAAAGTCCCCTTTTTAG-ACAATTCTGTTCGTACAGTAATAAGA  898

seq1  AGCCTAGTCACTATTTTTAAGCAGTGCTCAGAGGAAAACAAGGCTTCTCA  950
      |||||||| || |||||||||||  |||| || |||||||||||||||| 
seq2  AGCCTAGT-AC-ATTTTTAAGCATGGCTCCGAAGAAAACAAGGCTTCTCT  946

seq1  TCAGACTGCAGCTCCAGCAGCCCTGGCTGCTAGCACTCTGGCAAAGGAGT  1000
      | | |||||||||||||||||||||| |||||||||| ||||||| ||||
seq2  TAAAACTGCAGCTCCAGCAGCCCTGGTTGCTAGCACT-TGGCAAA-GAGT  994

seq1  CCAGTAGCAATTACAGTAGGGATTCACATGCACAGGGCATCTGAGTAAGG  1050
       |||||||||| || | | ||| ||||||||   ||||||||   |||||
seq2  TCAGTAGCAATCAC-GGAAGGAATCACATGCCACGGGCATCTTGATAAGG  1043

seq1  CCACAATCTTGA  1062
      || || ||||||
seq2  CC-CACTCTTGA  1054

seq1: chr15_73167004_73167947
seq2: B6Ng01-069M05.g_69_1013 (reverse)

seq1  ACATGATGAGCGATAATGTCAAGTGAAAGGCATAACACATGCAAACATCA  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACATGATGAGCGATAATGTC-AGTGAAAGGCATAACACATGCAAACATCA  49

seq1  GCT-AATGTGTGGGAAAGGCTTCCCTATCTTCTC-ATGCTTATTACTAGG  98
      ||| |||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCTAAATGTGTGGGAAAGGCTTCCCTATCTTCTCAATGCTTATTACTAGG  99

seq1  TTCCTTACTAGAGAAACTACCAAAAGCCCCTATTAACACTGCAGACTGTA  148
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TT-CTTACTAGAGAAACTACCAAAAGCCCCTATTAACACTGCAGACTGTA  148

seq1  TTCTATTTCTAAGATGGGCAGTGACCTCACCTCAATGTGCTTCTCTTT-C  197
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCTATTTCTAAGATGGGCAGTGACCTCACCTCAATGTGCTTCTCTTTCC  198

seq1  CTTCCTTCCCTATCTCACTCACTCTGCTAACTATCTCAAAATAAGGGTGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCCTATCTCACTCACTCTGCTAACTATCTCAAAATAAGGGTGC  248

seq1  AGAGCTTCAGAATTCTTGACACCTGGCCCAGAAGTCTATCTAAAGCTCCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTCAGAATTCTTGACACCTGGCCCAGAAGTCTATCTAAAGCTCCC  298

seq1  TCTAAAGCAAAGAACTTTATCTCTGGATGGCATACAGCAACTGTATTAGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGCAAAGAACTTTATCTCTGGATGGCATACAGCAACTGTATTAGT  348

seq1  TCCCTGCTGGTGCTATAACAAATCACCACAAATGCGAAGACATAAATGAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCTGGTGCTATAACAAATCACCACAAATGCGAAGACATAAATGAC  398

seq1  ACATAAGTATTATGTTTGGGGTTTGGAGAGCACAAGTCTGGAAGAGTCCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGTATTATGTTTGGGGTTTGGAGAGCACAAGTCTGGAAGAGTCCT  448

seq1  GTTGAGCCGACTTCAGGTACTTGCATTTAAGTCCCCAACTCACTGAGGCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCCGACTTCAGGTACTTGCATTTAAGTCCCCAACTCACTGAGGCT  498

seq1  TAGAATAGAAACTAGCCTTGAGTTGGCCAGAATCTCCCTGCCCAAGACTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAGAAACTAGCCTTGAGTTGGCCAGAATCTCCCTGCCCAAGACTG  548

seq1  GTTTCAGGTGCATATTTTACACACCAAAGCAGACCTGGCCTGTAGATTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGGTGCATATTTTACACACCAAAGCAGACCTGGCCTGTAGATTCT  598

seq1  CAAAGCACCCCTCAATTCCTAACTGGCATACCCTACCCCCAACCCTGAAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCACCCCTCAATTCCTAACTGGCATACCCTACCCCCAACCCTGAAC  648

seq1  TTTCCAGTCCAGAGGCTTAGCTGTCATTCCCCCAGAGGCTCTTTGCTATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTCCAGAGGCTTAGCTGTCATTCCCCCAGAGGCTCTTTGCTATA  698

seq1  TAACACAGACATTTTTTTCTTTCTCTCTCTCTCTCTGTCCCCCCCCACCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGACATTTTTTTCTTTCTCTCTCTCTCTCTGTCCCCCCCCACCT  748

seq1  CTGTGCACTTTCTCTCTTTCCCCTTTCTCCTTTCCTATGGCGACTTCCCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCACTTTCTCTCTTTCCCCTTTCTCCTTTCCTATGGCGACTTCCCT  798

seq1  GACCTCCTTCCTTGTGACCACTGAACTCACCTACCCAAGAGCAACTTCCG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCCTTCCTTGTGACCACTGAACTCACCTACCCAAGAGCAACTTCCG  848

seq1  AATAAACCTGCATTTATATATATTTTAATCTGGTTTGACTTGGCTCATTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACCTGCATTTATATATATTTTAATCTGGTTTGACTTGGCTCATTT  898

seq1  TACTGGCTGAGAAACAACTTATCAAAGACCACAGTGATAAAGAATTC  944
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGCTGAGAAACAACTTATCAAAGACCACAGTGATAAAGAATTC  945