BAC Information

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BAC

Clone NameB6Ng01-070A06
Chromosome15 (Build37)
Map Location 53,163,950 - 53,370,360
singlet/doubletdoublet
Overlap geneExt1, Samd12
Upstream geneSlc30a8, LOC100039748, Thrap6, LOC100039745
Downstream geneEG665097, EG621631, Tnfrsf11b, LOC665280, EG383032, Colec10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070A06.bB6Ng01-070A06.g
ACCDH888148DH888149
length730587
definitionDH888148|Mus musculus domesticus DNA, BAC clone: B6Ng01-070A06, 5' end.DH888149|Mus musculus domesticus DNA, BAC clone: B6Ng01-070A06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,369,631 - 53,370,360)(53,163,950 - 53,164,536)
sequence
gaattccagtttgtgagcctcaacaactcccacttaacagataagagata
ctcacatgagtggtgatcttatcccatgttgctcaaacaatgaaagtaaa
tctggaatatgcatcagttgacactgatgacttcaatctgcatgaagaat
ggtacctgcaggtgttcctataaaaacaattcttactagctagaagaaaa
caaactagatgagagggatatagaagttttataaacactactaaaacatc
cagatcaataaaagagaccaaaaacttgattgaataaaacatcttgcttc
cacctcattgcatccttgtccatattgatcagctgtaatagagcatgaca
aaaggtattgattgactgaggcaattctcaggtatttgggacttaaaagc
agctatagactaccaaaaaggcaatgctgtacacaagcctaaaaggagga
gggttaagtgaaaagagggctggggcttaaggtactcagtgtctggatcc
acctggcaaatgatttgcttgaggcagaatgggcctcatttactccacca
ataagttacacataagcatgtgttggttattgtcttataaatagctgttg
ataaaatgcccgcttaaagtatttgcctgggtttctgtatattgatttct
gttagactctctaaaagaaaaagcagattgaatagagagttctttctata
tttgagtgggggtgaggagagggagagaga
gaattcaagtaattgcactacagtgcatcgggtccaggctagataccctg
cgatctgtgagcgatacagcatgtctggtccgggtcctcatgagccacag
cagagtctaaacgcaggaaatagaggccggcaggaggaataacagtacac
cttcctcaccccaccctgtgctttttaattgagtgaaaaatctccacatg
aattcattagaagcctgaaagctttattaagcatgatgttcctgtgtgct
ccgcagcaatacttcaagtaccagttagcccagcttagatgtaaaaaaaa
aggccaaaatttttatccaaccaaacctgagaagggtatggaagaaactg
taaataaattggggaagaaatctcagaaacaaacaaactacatgttctct
ctcatatgtagaatctagccaataaaatgaatgcacatgtaaacctttgg
cacagtatgaaggaaagagaacaagaaaggctgaacacaaggagataaag
gctggctgaggtaatgggggaacacgcgttatgacagaggagatacagct
gctgggctttttgttttttttttgggggggggggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_53369631_53370360
seq2: B6Ng01-070A06.b_49_778 (reverse)

seq1  TCTCTCTCCCTCTCCTCACCCCCACTCAAATATAGAAAGAACTCTCTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCCCTCTCCTCACCCCCACTCAAATATAGAAAGAACTCTCTATT  50

seq1  CAATCTGCTTTTTCTTTTAGAGAGTCTAACAGAAATCAATATACAGAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGCTTTTTCTTTTAGAGAGTCTAACAGAAATCAATATACAGAAAC  100

seq1  CCAGGCAAATACTTTAAGCGGGCATTTTATCAACAGCTATTTATAAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAAATACTTTAAGCGGGCATTTTATCAACAGCTATTTATAAGACA  150

seq1  ATAACCAACACATGCTTATGTGTAACTTATTGGTGGAGTAAATGAGGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAACACATGCTTATGTGTAACTTATTGGTGGAGTAAATGAGGCCC  200

seq1  ATTCTGCCTCAAGCAAATCATTTGCCAGGTGGATCCAGACACTGAGTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCCTCAAGCAAATCATTTGCCAGGTGGATCCAGACACTGAGTACC  250

seq1  TTAAGCCCCAGCCCTCTTTTCACTTAACCCTCCTCCTTTTAGGCTTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCCCAGCCCTCTTTTCACTTAACCCTCCTCCTTTTAGGCTTGTGT  300

seq1  ACAGCATTGCCTTTTTGGTAGTCTATAGCTGCTTTTAAGTCCCAAATACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATTGCCTTTTTGGTAGTCTATAGCTGCTTTTAAGTCCCAAATACC  350

seq1  TGAGAATTGCCTCAGTCAATCAATACCTTTTGTCATGCTCTATTACAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATTGCCTCAGTCAATCAATACCTTTTGTCATGCTCTATTACAGCT  400

seq1  GATCAATATGGACAAGGATGCAATGAGGTGGAAGCAAGATGTTTTATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATATGGACAAGGATGCAATGAGGTGGAAGCAAGATGTTTTATTCA  450

seq1  ATCAAGTTTTTGGTCTCTTTTATTGATCTGGATGTTTTAGTAGTGTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTTTTTGGTCTCTTTTATTGATCTGGATGTTTTAGTAGTGTTTAT  500

seq1  AAAACTTCTATATCCCTCTCATCTAGTTTGTTTTCTTCTAGCTAGTAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTCTATATCCCTCTCATCTAGTTTGTTTTCTTCTAGCTAGTAAGA  550

seq1  ATTGTTTTTATAGGAACACCTGCAGGTACCATTCTTCATGCAGATTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTTATAGGAACACCTGCAGGTACCATTCTTCATGCAGATTGAAG  600

seq1  TCATCAGTGTCAACTGATGCATATTCCAGATTTACTTTCATTGTTTGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGTGTCAACTGATGCATATTCCAGATTTACTTTCATTGTTTGAGC  650

seq1  AACATGGGATAAGATCACCACTCATGTGAGTATCTCTTATCTGTTAAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGGATAAGATCACCACTCATGTGAGTATCTCTTATCTGTTAAGTG  700

seq1  GGAGTTGTTGAGGCTCACAAACTGGAATTC  730
      ||||||||||||||||||||||||||||||
seq2  GGAGTTGTTGAGGCTCACAAACTGGAATTC  730

seq1: chr15_53163950_53164536
seq2: B6Ng01-070A06.g_67_653

seq1  GAATTCAAGTAATTGCACTACAGTGCATCGGGTCCAGGCTAGATACCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTAATTGCACTACAGTGCATCGGGTCCAGGCTAGATACCCTG  50

seq1  CGATCTGTGAGCGATACAGCATGTCTGGTCCGGGTCCTCATGAGCCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCTGTGAGCGATACAGCATGTCTGGTCCGGGTCCTCATGAGCCACAG  100

seq1  CAGAGTCTAAACGCAGGAAATAGAGGCCGGCAGGAGGAATAACAGTACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCTAAACGCAGGAAATAGAGGCCGGCAGGAGGAATAACAGTACAC  150

seq1  CTTCCTCACCCCACCCTGTGCTTTTTAATTGAGTGAAAAATCTCCACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCACCCCACCCTGTGCTTTTTAATTGAGTGAAAAATCTCCACATG  200

seq1  AATTCATTAGAAGCCTGAAAGCTTTATTAAGCATGATGTTCCTGTGTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTAGAAGCCTGAAAGCTTTATTAAGCATGATGTTCCTGTGTGCT  250

seq1  CCGCAGCAATACTTCAAGTACCAGTTAGCCCAGCTTAGATGTAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGCAATACTTCAAGTACCAGTTAGCCCAGCTTAGATGTAAAAAAAA  300

seq1  AGGCCAAAATTTTTATCCAACCAAACCTGAGAAGGGTATGGAAGAAACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAAAATTTTTATCCAACCAAACCTGAGAAGGGTATGGAAGAAACTG  350

seq1  TAAATAAATTGGGGAAGAAATCTCAGAAACAAACAAACTACATGTTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATTGGGGAAGAAATCTCAGAAACAAACAAACTACATGTTCTCT  400

seq1  CTCATATGTAGAATCTAGCCAATAAAATGAATGCACATGTAAACCTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATGTAGAATCTAGCCAATAAAATGAATGCACATGTAAACCTTTGG  450

seq1  CACAGTATGAAGGAAAGAGAACAAGAAAGGCTGAACACAAGGAGATAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTATGAAGGAAAGAGAACAAGAAAGGCTGAACACAAGGAGATAAAG  500

seq1  GCTGGCTGAGGTAATGGGGGAACACGCGTTATGACAGAGGAGATACAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTGAGGTAATGGGGGAACACGCGTTATGACAGAGGAGATACAGCT  550

seq1  GCTGGGCTTTTTGTTTTTTTTTTGGGGGGGGGGGAGT  587
      |||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCTTTTTGTTTTTTTTTTGGGGGGGGGGGAGT  587