BAC Information

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BAC

Clone NameB6Ng01-070D13
Chromosome15 (Build37)
Map Location 26,959,404 - 27,061,116
singlet/doubletdoublet
Overlap genenone
Upstream geneAK162044, Fbxl7, LOC622531, LOC625311
Downstream geneAnk, BC087945, LOC100040622, BC052328, Trio, LOC667126
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070D13.bB6Ng01-070D13.g
ACCDH888289DH888290
length388445
definitionDH888289|Mus musculus domesticus DNA, BAC clone: B6Ng01-070D13, 5' end.DH888290|Mus musculus domesticus DNA, BAC clone: B6Ng01-070D13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,060,722 - 27,061,116)(26,959,404 - 26,959,854)
sequence
tttgagctgtcttaaagtttctgtaagaaagcccaatgcacacattcgct
caaggaattcactggtaatttactgctccttgaaaaagctgtgttttgcc
acttctctgtaatgtcttgtgattggctgttaaacttgtgcatttgaaat
aaaaaagctcaataattaaaaatgattgtacattgactctgatagagaaa
aatctccttgtgtatctaacctgaagattggggagcttttaaaatcattt
taggcaaacatcttttctgagtctgttcacatattttttccaatttttca
atgtaatgactgctctcaagtatgctgttttacctgagagtctcactcat
ggttatgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtg
ctagagaattgagcatggttaatatatttacccagttgctacaatatgtt
tgtgtctgcatcctacatatgagtcttgacttctacaatttaacaagttt
gtttatgaatgaatgaatgcaggaaggaggaaacctgtgtcagcgagctg
ctctgtcctactaataatggtttttgtgtgctcatgagtccatggatctg
ctgactaattctgatctccgctggctttcataatcccagctggaattgcc
gccatgtatgtagtcatcattttcttcctgtagttgactagtctaggctg
gctggaggtagaaggctggcagctggtgtggttggctaggagtaacaggg
ctgtgtgtgcttccccatatgaaaggctagtccccaggttccaacagaag
aaggcatatgtagaggcattgactttgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_27060722_27061116
seq2: B6Ng01-070D13.b_45_438 (reverse)

seq1  CACACACACACACACACACACACACACACCACATAACCATGAGTGAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACCACATAACCATGAGTGAGACT  50

seq1  CTCAGGTAAAACAGCATACTTGAGAGCAGTCATTACATTGAAAAATTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTAAAACAGCATACTTGAGAGCAGTCATTACATTGAAAAATTGGA  100

seq1  AAAAATATGTGAACAGACTCAGAAAAGATGTTTGCCTAAAATGATTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATGTGAACAGACTCAGAAAAGATGTTTGCCTAAAATGATTTTAA  150

seq1  AAGCTCCCCAATCTTCAGGTTAGATACACAAGGAGATTTTTCTCTATCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCCCAATCTTCAGGTTAGATACACAAGGAGATTTTTCTCTATCAG  200

seq1  AGTCAATGTACAATCATTTTTAATTATTGAGCTTTTTTATTTCAAATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATGTACAATCATTTTTAATTATTGAGCTTTTTTATTTCAAATGCA  250

seq1  CAAGTTTAACAGCCAATCACAAGACATTACAGAGAAGTGGCAAAACACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTAACAGCCAATCACAAGACATTACAGAGAAGTGGCAAAACACAG  300

seq1  CTTTTTCAAGGAGCAGTAAATTACCAGTGAATTCCTTGAGCGAATGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCAAGGAGCAGTAAATTACCAGTGAATTCCTTGAGCGAATGTGTG  350

seq1  CATTGGGCTTACTTGACAGAAACTTTAAGACAGCTCAAAGAATTC  395
      |||||||||| ||| ||||||||||||||||||||||||||||||
seq2  CATTGGGCTTTCTT-ACAGAAACTTTAAGACAGCTCAAAGAATTC  394

seq1: chr15_26959404_26959854
seq2: B6Ng01-070D13.g_66_516

seq1  GAATTCCTAGAGAATTGAGCATGGTTAATATATTTACCCAGTTGCTACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGAGAATTGAGCATGGTTAATATATTTACCCAGTTGCTACAA  50

seq1  TATGTTTGTGTCTGCATCCTACATATGAGTCTTGACTTCTACAATTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTGTGTCTGCATCCTACATATGAGTCTTGACTTCTACAATTTAAC  100

seq1  AAGTTTGTTTATGAATGAATGAATGCAGGAAGGAGGAAACCTGTGTCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGTTTATGAATGAATGAATGCAGGAAGGAGGAAACCTGTGTCAGC  150

seq1  GAGCTGCTCTGTCCTACTAATAATGGTTTTTGTGTGCTCATGAGTCCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGCTCTGTCCTACTAATAATGGTTTTTGTGTGCTCATGAGTCCATG  200

seq1  GATCTGCTGACTAATTCTGATCTCCGCTGGCTTTCATAATCCCAGCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCTGACTAATTCTGATCTCCGCTGGCTTTCATAATCCCAGCTGGA  250

seq1  ATTGCCGCCATGTATGTAGTCATCATTTTCTTCCTGTAGTTGACTAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCGCCATGTATGTAGTCATCATTTTCTTCCTGTAGTTGACTAGTCT  300

seq1  AGGCTGGCTGGAGGTAGAAGGCTGGCAGCTGGTGTGGTTGGCTAGGAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCTGGAGGTAGAAGGCTGGCAGCTGGTGTGGTTGGCTAGGAGTA  350

seq1  ACAGGGCTGTGTGTGCTTCCCCATATGAAAGGCTAGTCCCCAGGTTCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCTGTGTGTGCTTCCCCATATGAAAGGCTAGTCCCCAGGTTCCAA  400

seq1  CAGAAGAAGGCATATGTAGAGGCATTGACTTTGTGTGTGTGTGTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAAGGCATATGTAGAGGCATTGACTTTGTGTGTGTGTGTGTGTGT  450

seq1  G  451
      |
seq2  G  451