BAC Information

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BAC

Clone NameB6Ng01-071B11
Chromosome15 (Build37)
Map Location 76,663,213 - 76,783,472
singlet/doubletdoublet
Overlap geneZfp251, Zfp7, Commd5, Rpl8, Zfp647, 1110038F14Rik
Upstream geneZc3h3, LOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl, Tsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina, Spatc1, LOC100041269, Oplah, Exosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5, Bop1, Scx, Hsf1, Dgat1, Scrt1, LOC666497, EG666504, Fbxl6, Gpr172b, Adck5, Cpsf1, Slc39a4, Vps28, Nfkbil2, Cyhr1, Kifc2, Foxh1, Ppp1r16a, Gpt1, Mfsd3, Recql4, Lrrc14, Lrrc24, C030006K11Rik, D15Wsu169e
Downstream geneMb, Apol6, Rbm9, LOC100042318, Apol3, BC020489, BC085284, LOC624454, EG666639, 9030421J09Rik, EG626615, 2210421G13Rik, 9130218O11Rik, LOC666661, A330102K04Rik, EG545115, LOC666348, LOC666679, 2310016F22Rik, Apol2, Myh9, Txn2, Foxred2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071B11.bB6Ng01-071B11.g
ACCDH888891DH888892
length1,1091,204
definitionDH888891|Mus musculus domesticus DNA, BAC clone: B6Ng01-071B11, 5' end.DH888892|Mus musculus domesticus DNA, BAC clone: B6Ng01-071B11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,663,213 - 76,664,333)(76,782,239 - 76,783,472)
sequence
gaattctttatcacttggtggaaacagaaatggattcagatggcttaaaa
gacaggttagtgatagagagtggaattgagcatgcattcgtcctagaagc
ctagagaccctcccagggcgtgtgatctagagagcttttcacgcaggtcc
tctcagactgtaagaagacgactgtctcagtcccacctgtagaagagaga
ccaggaggcatcctcctgctcttcatcaggggacaggtgagcaaaatgct
gtagcctaatgtaaataccacacaggaattagaaacggaagaggagctgt
gcaaggcagagaccctaaacccaggacatcagcagctagggcccactggg
aggtcttcatgtcactggggtcgagccttgaaagggggttgtaagacctg
ttcccttttctcctcacttgcttcccagccgtgcggtgagtggctttact
ccacaagctcccgcccatggcatgcctgccacctcaccacaggtccaaaa
gcaatatcagcattgtatacactttcctaactgtgatcccaaatacagca
ttaaggggctggagagatggatcagcggtggagaatctatactattctcc
cagagggtctgagttcaatcctcagtacccaggtgaggtggctcaccacc
gcttgtaactccatccagttccaggtgattcagtgtctctggcctttctg
agcatctgcactcttgtgcacacacacacacacacacacacactcactca
cctgacggaaaataaataagatgaggctgtagaggaaggtcaatagaaat
taagcgaatatagagcttggtaccaaaaaaagcaagcatcacccttgcta
ggataaacctatgtggtccttacaccacttgaactatatcatgactaaca
ggtgaaagagtttggaacattgagctaagaaagaattgatgacgtgggtg
gagcttaacgggctattgtagtggaagcatggaagacataatgctttgag
aaatgtgagcagtgagtcctggctcatgaatttcagaggggacatgactt
tgtgactgggctaagggccggctctctatgtattttgatcagaacgtggc
ttcattttt
gaattcattgttagcccaatgagtttcaagtaatttcactgccgacttta
atgccagtttatgctctagtcgtctgaattaaagtcaatctgcaccaaaa
taaaaaatacaaaaaccccttaagcacaactaaactctgttttatggagc
taagagatatcaagctgctgaaacagatgtttttaaaattgactatggaa
tagctgtcctctgtttctcaagaagaacaaatgcactcttaaaccgtggt
tattcagagtaacccagacttcccaaaggcttaaatagtttggaatggct
ccaaacccaaaaaggggtatgagaaaaaggaaagggtaaggagctaggga
gagtgggagaggctggaccaacagagagccagtcagcttttagaagtaga
tcaggagccctagcaacaatgaaaggatgcttggagattacatctgattg
gcttaccagccagaaatggttagttctgattggctggtgacgatgcttcc
aaccagtcagccttttgcagggaagtaaatttatctggcagaaaggacag
gcggtagaagccagcaagaagaaaaagaaagagacctggacaaaaggaca
gcagattatttgtaacgtggtggcagctgagacgaatgaaatcagacacc
tatttatgtaacagcttactgtttgcaaaatgggttagcattatctccac
acgctactatcttgacagggagatttccccctaacccttagctaacctta
gtaccctaacccatatagacctacagccagaacccaaactctagacccca
accctcacctaaccctcgacttaccctaacactaagtattgaatagtgtt
gaaaaaaacagagcagggctggagagatggctcagcggttaaggtcatga
ccgctctgccgaaggtcctgagttcaattgaaggaaagggaaagggaaag
ggaaagggaaagggaaaggaacaaacaacagagcaagcataaacatgaca
tagtttctggcctaagcactagatagacagtaaatatcactgactaaaag
cacacggagacggggacccattagtatttctgtaaaacgctgagtttgag
ctgccacaaatactcaccagaaggcaaacgcagcttgactccagtgtact
agtctagaatagattggtaagccacgaacacaacggttaacctgctggtt
acct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_76663213_76664333
seq2: B6Ng01-071B11.b_46_1154

seq1  GAATTCTTTATCACTTGGTGGAAACAGAAATGGATTCAGATGGCTTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATCACTTGGTGGAAACAGAAATGGATTCAGATGGCTTAAAA  50

seq1  GACAGGTTAGTGATAGAGAGTGGAATTGAGCATGCATTCGTCCTAGAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTTAGTGATAGAGAGTGGAATTGAGCATGCATTCGTCCTAGAAGC  100

seq1  CTAGAGACCCTCCCAGGGCGTGTGATCTAGAGAGCTTTTCACGCAGGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGACCCTCCCAGGGCGTGTGATCTAGAGAGCTTTTCACGCAGGTCC  150

seq1  TCTCAGACTGTAAGAAGACGACTGTCTCAGTCCCACCTGTAGAAGAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGACTGTAAGAAGACGACTGTCTCAGTCCCACCTGTAGAAGAGAGA  200

seq1  CCAGGAGGCATCCTCCTGCTCTTCATCAGGGGACAGGTGAGCAAAATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGGCATCCTCCTGCTCTTCATCAGGGGACAGGTGAGCAAAATGCT  250

seq1  GTAGCCTAATGTAAATACCACACAGGAATTAGAAACGGAAGAGGAGCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTAATGTAAATACCACACAGGAATTAGAAACGGAAGAGGAGCTGT  300

seq1  GCAAGGCAGAGACCCTAAACCCAGGACATCAGCAGCTAGGGCCCACTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCAGAGACCCTAAACCCAGGACATCAGCAGCTAGGGCCCACTGGG  350

seq1  AGGTCTTCATGTCACTGGGGTCGAGCCTTGAAAGGGGGTTGTAAGACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTCATGTCACTGGGGTCGAGCCTTGAAAGGGGGTTGTAAGACCTG  400

seq1  TTCCCTTTTCTCCTCACTTGCTTCCCAGCCGTGCGGTGAGTGGCTTTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTTCTCCTCACTTGCTTCCCAGCCGTGCGGTGAGTGGCTTTACT  450

seq1  CCACAAGCTCCCGCCCATGGCATGCCTGCCACCTCACCACAGGTCCAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGCTCCCGCCCATGGCATGCCTGCCACCTCACCACAGGTCCAAAA  500

seq1  GCAATATCAGCATTGTATACACTTTCCTAACTGTGATCCCAAATACAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATATCAGCATTGTATACACTTTCCTAACTGTGATCCCAAATACAGCA  550

seq1  TTAAGGGGCTGGAGAGATGGATCAGCGGTGGAGAATCTATACTATTCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGGCTGGAGAGATGGATCAGCGGTGGAGAATCTATACTATTCTCC  600

seq1  CAGAGGGTCTGAGTTCAATCCTCAGTACCCAGGTGAGGTGGCTCACCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGTCTGAGTTCAATCCTCAGTACCCAGGTGAGGTGGCTCACCACC  650

seq1  GCTTGTAACTCCATCCAGTTCCAGGTGATTCAGTGTCTCTGGCCTTTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTAACTCCATCCAGTTCCAGGTGATTCAGTGTCTCTGGCCTTTCTG  700

seq1  AGCATCTGCACTCTTGTGCACACACACACACACACACACACACTCACTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTGCACTCTTGTGCACACACACACACACACACACACACTCACTCA  750

seq1  CCTGACGGAAAATAAATAAGATGAGGCTGTAGAGGAAGGTCAATAGAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACGGAAAATAAATAAGATGAGGCTGTAGAGGAAGGTCAATAGAAAT  800

seq1  TAAGCGAATATAGAGCTTGGTACCAAAAAAAGCAAGCATCACCCTTGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCGAATATAGAGCTTGGTACCAAAAAAAGCAAGCATCACCCTTGCTA  850

seq1  GGATAAACCTATGTGGTCCTTACACCACTTGAACTATATCATGACTAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAACCTATGTGGTCCTTACACCACTTGAACTATATCATGACTAACA  900

seq1  GGTGAAAGAGTTTGGAACATTGAGCTAAGAAAGAATTGAATGACGTGGGT  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGTGAAAGAGTTTGGAACATTGAGCTAAGAAAGAATTG-ATGACGTGGGT  949

seq1  GGAGCTTAACGGGCTATTGTAGTGGAAGCATGGAAGACAATAATGCTTTG  1000
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGAGCTTAACGGGCTATTGTAGTGGAAGCATGGAAGAC-ATAATGCTTTG  998

seq1  AGAAATGTGAGCAGTGGAGTCCTGGCTCATGAATTTCAGAGGGGACCAAG  1050
      ||||||||||||||| ||||||||||||||||||||||||||||||  | 
seq2  AGAAATGTGAGCAGT-GAGTCCTGGCTCATGAATTTCAGAGGGGAC--AT  1045

seq1  GACTTTGTTGGAACTGGGCTAGGGGCCGGCTCTTCCTATGGTATTTTGAT  1100
      ||||||||    ||||||||| |||||||||||  |||| ||||||||||
seq2  GACTTTGT---GACTGGGCTAAGGGCCGGCTCT--CTAT-GTATTTTGAT  1089

seq1  CAAGAACGTGGCTTCATTTTT  1121
      | |||||||||||||||||||
seq2  C-AGAACGTGGCTTCATTTTT  1109

seq1: chr15_76782239_76783472
seq2: B6Ng01-071B11.g_67_1270 (reverse)

seq1  AGGTAAACCAGCAGTGTTCACACCGTTGTGGTCTGCTGGCGTTGCCCAAA  50
      |||| ||||||||| |||   ||||||||| ||   ||||  |  |||| 
seq2  AGGT-AACCAGCAG-GTT--AACCGTTGTGTTC--GTGGC--TTACCAAT  42

seq1  CTCATATCCTAGACTAAGTACAACCTGGAGTCCAGCTGCGTTTGCCCTTT  100
      |   ||| ||||||| ||||||  |||||||| |||||||||||||  ||
seq2  C---TATTCTAGACT-AGTACA--CTGGAGTCAAGCTGCGTTTGCC--TT  84

seq1  CTGGGTGAGTATTTTGTGGGCAGCTCAAACTCAGCGTTGTTACAGAAATA  150
      || |||||||| ||||| |||||||||||||||||||| |||||||||||
seq2  CT-GGTGAGTA-TTTGT-GGCAGCTCAAACTCAGCGTT-TTACAGAAATA  130

seq1  CCTAATTGGGTCCCCCGTCTCCGTGTGCTTTTTAGTCAGTGATATTTACT  200
       |||| ||||| |||||||||||||||| |||||||||||||||||||||
seq2  -CTAA-TGGGT-CCCCGTCTCCGTGTGC-TTTTAGTCAGTGATATTTACT  176

seq1  GTCTTATCTAGTTGCTTAGGCCAGAAACTTATGTCATTGTTTATTGCTTG  250
      ||| ||||||| |||||||||||||||| ||||||| |||||| ||||||
seq2  GTC-TATCTAG-TGCTTAGGCCAGAAAC-TATGTCA-TGTTTA-TGCTTG  221

seq1  CTCTGTTTGTTTGTTCCTTTCCCTTTCCCTTTCCCTTTCCCTTTCCCTTT  300
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTG-TTGTTTGTTCCTTTCCCTTTCCCTTTCCCTTTCCCTTTCCCTTT  270

seq1  CCTTCAATTGAACTCAGGACCTTCGGCAGAGCGGTCATGACCTTAACCGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAATTGAACTCAGGACCTTCGGCAGAGCGGTCATGACCTTAACCGC  320

seq1  TGAGCCATCTCTCCAGCCCTGCTCTGTTTTTTTCAACACTATTCAATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCATCTCTCCAGCCCTGCTCTGTTTTTTTCAACACTATTCAATACT  370

seq1  TAGTGTTAGGGTAAGTCGAGGGTTAGGTGAGGGTTGGGGTCTAGAGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTAGGGTAAGTCGAGGGTTAGGTGAGGGTTGGGGTCTAGAGTTTG  420

seq1  GGTTCTGGCTGTAGGTCTATATGGGTTAGGGTACTAAGGTTAGCTAAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGGCTGTAGGTCTATATGGGTTAGGGTACTAAGGTTAGCTAAGGG  470

seq1  TTAGGGGGAAATCTCCCTGTCAAGATAGTAGCGTGTGGAGATAATGCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGGGAAATCTCCCTGTCAAGATAGTAGCGTGTGGAGATAATGCTAA  520

seq1  CCCATTTTGCAAACAGTAAGCTGTTACATAAATAGGTGTCTGATTTCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTGCAAACAGTAAGCTGTTACATAAATAGGTGTCTGATTTCATT  570

seq1  CGTCTCAGCTGCCACCACGTTACAAATAATCTGCTGTCCTTTTGTCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCAGCTGCCACCACGTTACAAATAATCTGCTGTCCTTTTGTCCAGG  620

seq1  TCTCTTTCTTTTTCTTCTTGCTGGCTTCTACCGCCTGTCCTTTCTGCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTTTTTCTTCTTGCTGGCTTCTACCGCCTGTCCTTTCTGCCAG  670

seq1  ATAAATTTACTTCCCTGCAAAAGGCTGACTGGTTGGAAGCATCGTCACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTACTTCCCTGCAAAAGGCTGACTGGTTGGAAGCATCGTCACCA  720

seq1  GCCAATCAGAACTAACCATTTCTGGCTGGTAAGCCAATCAGATGTAATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATCAGAACTAACCATTTCTGGCTGGTAAGCCAATCAGATGTAATCT  770

seq1  CCAAGCATCCTTTCATTGTTGCTAGGGCTCCTGATCTACTTCTAAAAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCATCCTTTCATTGTTGCTAGGGCTCCTGATCTACTTCTAAAAGCT  820

seq1  GACTGGCTCTCTGTTGGTCCAGCCTCTCCCACTCTCCCTAGCTCCTTACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGCTCTCTGTTGGTCCAGCCTCTCCCACTCTCCCTAGCTCCTTACC  870

seq1  CTTTCCTTTTTCTCATACCCCTTTTTGGGTTTGGAGCCATTCCAAACTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTTTCTCATACCCCTTTTTGGGTTTGGAGCCATTCCAAACTAT  920

seq1  TTAAGCCTTTGGGAAGTCTGGGTTACTCTGAATAACCACGGTTTAAGAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCTTTGGGAAGTCTGGGTTACTCTGAATAACCACGGTTTAAGAGT  970

seq1  GCATTTGTTCTTCTTGAGAAACAGAGGACAGCTATTCCATAGTCAATTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGTTCTTCTTGAGAAACAGAGGACAGCTATTCCATAGTCAATTTT  1020

seq1  AAAAACATCTGTTTCAGCAGCTTGATATCTCTTAGCTCCATAAAACAGAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATCTGTTTCAGCAGCTTGATATCTCTTAGCTCCATAAAACAGAG  1070

seq1  TTTAGTTGTGCTTAAGGGGTTTTTGTATTTTTTATTTTGGTGCAGATTGA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTGTGCTTAAGGGGTTTTTGTATTTTTTATTTTGGTGCAGATTGA  1120

seq1  CTTTAATTCAGACGACTAGAGCATAAACTGGCATTAAAGTCGGCAGTGAA  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATTCAGACGACTAGAGCATAAACTGGCATTAAAGTCGGCAGTGAA  1170

seq1  ATTACTTGAAACTCATTGGGCTAACAATGAATTC  1234
      ||||||||||||||||||||||||||||||||||
seq2  ATTACTTGAAACTCATTGGGCTAACAATGAATTC  1204