BAC Information

Click to search

BAC

Clone NameB6Ng01-071J23
Chromosome15 (Build37)
Map Location 57,501,541 - 57,592,676
singlet/doubletdoublet
Overlap geneZhx2
Upstream geneHas2, EG594843, LOC435442, LOC100040067, LOC100039984, BC026439
Downstream geneDerl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32, 8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e, EG631797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071J23.bB6Ng01-071J23.g
ACCDH889270DH889271
length1,1541,006
definitionDH889270|Mus musculus domesticus DNA, BAC clone: B6Ng01-071J23, 5' end.DH889271|Mus musculus domesticus DNA, BAC clone: B6Ng01-071J23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,501,541 - 57,502,708)(57,591,971 - 57,592,676)
sequence
gaattcactacactttcccctccgtgatgactctctgaaaacaggaatca
aagacattcttccctccccccagtagtttgggtcacagtgatgtgaaagt
aattacagcagtaggtaccaggctgcaactgggcattcggggctggtttg
gactcttatgtgaattgattcacatagccccttatggccaacatagtgca
gtagtgactaaccacggttgtctctgcttaagagaggacacagaggagca
gagaggttaagtaactagcccaggacaacacaattagtgatctcattcca
catctgggtagagagcttttgcatttggcctcagctttcctgtgtatgtg
tgacccctaggcacagaaaggtttgtgcataagacatcatttagtggtct
gtttgttgctttcttacagtcatgtgtagtctaccacacttgtcaatctg
catgtaccatgagtgtcccaccaacatcaaaacccacaaaccatggggtc
tcgcagtacacactgagcacatttatgtgggctctggggaatccccagcc
ctgagagccctgagagccctgagagcccaggccctctccagctcctgcta
agtaatattgcagcagctcatcttttccacttaaaagccggccaaggcag
gcatgatggctcatgcctctgattccagcactcaggaggctaaaacggga
ggagcaggagatggaggacaatgtgagagacacactgagactcggaaaca
aaaacaaaaagtaaatatacgttttattgggaaaatgtagtatcatgcaa
tagatttttgaccatgactcccctctccaaattcctcccagattctctcc
cacctctctctctacccactcaactttgtattcttttcctctcttttctc
tctgcaaaacaaacaacaaaaataaacagacacacacaaaacaatcaaac
aaaaaatggaaatcaaaataaacagaaaagatcatgagacaaaaaaaaat
acccaacaaagcaaaaggagtcagaaagtatacaaaatactattgagttc
atcttgtgtagccagccactgtaggactggggcctgtagtagtgaaactc
caatggagaaaaactggagttttcctttgcggtcggatcatgccaagctt
cttg
gaattcagatctttcatccctacccatagaatgacctatctgggagaaga
gccctccccttccccaaggagaccaggcagtgagtgagtgacccttagga
agtgctatttcaggcaggtgagagttactattctctgtttccaagagaag
accagaggcctcaagctagccatgatgggggaagggatgtcacacatagt
ttatttattctcttcttacacagtaactccccactgtagcctctactcca
acccccactcctctcagtcccccccccccccataccttcctactcctcca
catcccctgctcctcaagttccttttaagaaagagcaggtttcccaggga
tagcactcaaacggagcatagcaagttacaataagactaggcacaaacct
tcctatccaggctgaacgaggcaactcagtaggaggaaagggacccatga
gcaggcaaaagagtcagagataaccccactcccactgttagaagttcctc
caaaactccaagctaaacagctgcagcatgtttgcagaggacctaggtca
gacccatgcaggctccatgatcatcacttcagtctctgtgagtccctgtg
agccctgcttagttgattccgtgggacatggtcttatggtgtcctcaagc
cctctggttcttacaatccttctctccctcttttatagggttctgtgggc
aaaagaatgaggaaagggatgtcccagggaggtttgtttgtttgtttcaa
agaattatttatttatgcatacagatacaatgtagctctcttcagacaca
ccagaagagggcatctgatctcattatacatggttgtgagccaccatgtg
ggttgctgggagttgaactcaggactggaagaagcattcagtgctcttaa
ctctgagctatctctccaggctccatcccctttcatgctcttgattagtg
acatcctactccatgttttgattccaactcacattatagatgggtttttt
ttttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_57501541_57502708
seq2: B6Ng01-071J23.b_44_1197

seq1  GAATTCACTACACTTTCCCCTCCGTGATGACTCTCTGAAAACAGGAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTACACTTTCCCCTCCGTGATGACTCTCTGAAAACAGGAATCA  50

seq1  AAGACATTCTTCCCTCCCCCCAGTAGTTTGGGTCACAGTGATGTGAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTCTTCCCTCCCCCCAGTAGTTTGGGTCACAGTGATGTGAAAGT  100

seq1  AATTACAGCAGTAGGTACCAGGCTGCAACTGGGCATTCGGGGCTGGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAGCAGTAGGTACCAGGCTGCAACTGGGCATTCGGGGCTGGTTTG  150

seq1  GACTCTTATGTGAATTGATTCACATAGCCCCTTATGGCCAACATAGTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTATGTGAATTGATTCACATAGCCCCTTATGGCCAACATAGTGCA  200

seq1  GTAGTGACTAACCACGGTTGTCTCTGCTTAAGAGAGGACACAGAGGAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGACTAACCACGGTTGTCTCTGCTTAAGAGAGGACACAGAGGAGCA  250

seq1  GAGAGGTTAAGTAACTAGCCCAGGACAACACAATTAGTGATCTCATTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTTAAGTAACTAGCCCAGGACAACACAATTAGTGATCTCATTCCA  300

seq1  CATCTGGGTAGAGAGCTTTTGCATTTGGCCTCAGCTTTCCTGTGTATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGGTAGAGAGCTTTTGCATTTGGCCTCAGCTTTCCTGTGTATGTG  350

seq1  TGACCCCTAGGCACAGAAAGGTTTGTGCATAAGACATCATTTAGTGGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCCTAGGCACAGAAAGGTTTGTGCATAAGACATCATTTAGTGGTCT  400

seq1  GTTTGTTGCTTTCTTACAGTCATGTGTAGTCTACCACACTTGTCAATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTGCTTTCTTACAGTCATGTGTAGTCTACCACACTTGTCAATCTG  450

seq1  CATGTACCATGAGTGTCCCACCAACATCAAAACCCACAAACCATGGGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACCATGAGTGTCCCACCAACATCAAAACCCACAAACCATGGGGTC  500

seq1  TCGCAGTACACACTGAGCACATTTATGTGGGCTCTGGGGAATCCCCAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGTACACACTGAGCACATTTATGTGGGCTCTGGGGAATCCCCAGCC  550

seq1  CTGAGAGCCCTGAGAGCCCTGAGAGCCCAGGCCCTCTCCAGCTCCTGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGCCCTGAGAGCCCTGAGAGCCCAGGCCCTCTCCAGCTCCTGCTA  600

seq1  AGTAATATTGCAGCAGCTCATCTTTTCCACTTAAAAGCCGGCCAAGGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATATTGCAGCAGCTCATCTTTTCCACTTAAAAGCCGGCCAAGGCAG  650

seq1  GCATGATGGCTCATGCCTCTGATTCCAGCACTCAGGAGGCTAAAACGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGATGGCTCATGCCTCTGATTCCAGCACTCAGGAGGCTAAAACGGGA  700

seq1  GGAGCAGGAGATGGAGGACAATGTGAGAGACACACTGAGACTCGGAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGGAGATGGAGGACAATGTGAGAGACACACTGAGACTCGGAAACA  750

seq1  AAAACAAAAAGTAAATATACGTTTTATTGGGAAAATGTAGTATCATGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAAGTAAATATACGTTTTATTGGGAAAATGTAGTATCATGCAA  800

seq1  TAGATTTTTGACCATGACTTCCCTCCCCAAATTCCTCCCAGATTCTCTCC  850
      ||||||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  TAGATTTTTGACCATGACTCCCCTCTCCAAATTCCTCCCAGATTCTCTCC  850

seq1  CACCTCTCTCTCTACCCACTCAACTTTGTATTCTTTTCCTCTC-TTTCTC  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CACCTCTCTCTCTACCCACTCAACTTTGTATTCTTTTCCTCTCTTTTCTC  900

seq1  TCTGCAAAACAAACAACAAAAATAAAACAGACACACACAAAAACAATCAA  949
      ||||||||||||||||||||||| |||||||||||||| |||||||||||
seq2  TCTGCAAAACAAACAACAAAAAT-AAACAGACACACAC-AAAACAATCAA  948

seq1  ACAAAAAAATGGAAATCAAAATAAACAAGAAAAAGATCATGAGACAAAAA  999
      || ||||||||||||||||||||||||   ||||||||||||||| ||||
seq2  AC-AAAAAATGGAAATCAAAATAAACA--GAAAAGATCATGAGAC-AAAA  994

seq1  AAAAATACACAAACAAAGCAAAAGGAGTCAGAAAGTATACAAAATACTAT  1049
      |||||||| | |||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAC-CCAACAAAGCAAAAGGAGTCAGAAAGTATACAAAATACTAT  1043

seq1  TGAGTTCATCTTGTGTTAGCCAGCCACTGTAGGACATGGGGCCCTGTAGT  1099
      ||||||||||||||| ||||||||||||||||||| ||||| ||||||| 
seq2  TGAGTTCATCTTGTG-TAGCCAGCCACTGTAGGAC-TGGGG-CCTGTAG-  1089

seq1  TAGTGAGACTCCATTGGAG-AAGACT-GAGTTTTCCTTTGCTGGTCGGTA  1147
      |||||| |||||| ||||| || ||| |||||||||||||| |||||| |
seq2  TAGTGAAACTCCAATGGAGAAAAACTGGAGTTTTCCTTTGC-GGTCGG-A  1137

seq1  TCAATTGCAGATAGCTTCTTG  1168
      |||  |||    |||||||||
seq2  TCA--TGC--CAAGCTTCTTG  1154

seq1: chr15_57591971_57592676
seq2: B6Ng01-071J23.g_68_773 (reverse)

seq1  TCTTTTGCCCACAGAACCCTATAAAAGAGGGAGAGAAGGATTGTAAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGCCCACAGAACCCTATAAAAGAGGGAGAGAAGGATTGTAAGAAC  50

seq1  CAGAGGGCTTGAGGACACCATAAGACCATGTCCCACGGAATCAACTAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGCTTGAGGACACCATAAGACCATGTCCCACGGAATCAACTAAGC  100

seq1  AGGGCTCACAGGGACTCACAGAGACTGAAGTGATGATCATGGAGCCTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCACAGGGACTCACAGAGACTGAAGTGATGATCATGGAGCCTGCA  150

seq1  TGGGTCTGACCTAGGTCCTCTGCAAACATGCTGCAGCTGTTTAGCTTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTGACCTAGGTCCTCTGCAAACATGCTGCAGCTGTTTAGCTTGGA  200

seq1  GTTTTGGAGGAACTTCTAACAGTGGGAGTGGGGTTATCTCTGACTCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGAGGAACTTCTAACAGTGGGAGTGGGGTTATCTCTGACTCTTTT  250

seq1  GCCTGCTCATGGGTCCCTTTCCTCCTACTGAGTTGCCTCGTTCAGCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTCATGGGTCCCTTTCCTCCTACTGAGTTGCCTCGTTCAGCCTGG  300

seq1  ATAGGAAGGTTTGTGCCTAGTCTTATTGTAACTTGCTATGCTCCGTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAGGTTTGTGCCTAGTCTTATTGTAACTTGCTATGCTCCGTTTGA  350

seq1  GTGCTATCCCTGGGAAACCTGCTCTTTCTTAAAAGGAACTTGAGGAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTATCCCTGGGAAACCTGCTCTTTCTTAAAAGGAACTTGAGGAGCAG  400

seq1  GGGATGTGGAGGAGTAGGAAGGTATGGGGGGGGGGGGGACTGAGAGGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTGGAGGAGTAGGAAGGTATGGGGGGGGGGGGGACTGAGAGGAGT  450

seq1  GGGGGTTGGAGTAGAGGCTACAGTGGGGAGTTACTGTGTAAGAAGAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTTGGAGTAGAGGCTACAGTGGGGAGTTACTGTGTAAGAAGAGAAT  500

seq1  AAATAAACTATGTGTGACATCCCTTCCCCCATCATGGCTAGCTTGAGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACTATGTGTGACATCCCTTCCCCCATCATGGCTAGCTTGAGGCC  550

seq1  TCTGGTCTTCTCTTGGAAACAGAGAATAGTAACTCTCACCTGCCTGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCTTCTCTTGGAAACAGAGAATAGTAACTCTCACCTGCCTGAAAT  600

seq1  AGCACTTCCTAAGGGTCACTCACTCACTGCCTGGTCTCCTTGGGGAAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTCCTAAGGGTCACTCACTCACTGCCTGGTCTCCTTGGGGAAGGG  650

seq1  GAGGGCTCTTCTCCCAGATAGGTCATTCTATGGGTAGGGATGAGAGATCT  700
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAGGGCTCTTCTCCCAGATAGGTCATTCTATGGGTAGGGATGAAAGATCT  700

seq1  GAATTC  706
      ||||||
seq2  GAATTC  706