BAC Information

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BAC

Clone NameB6Ng01-074L10
Chromosome15 (Build37)
Map Location 31,764,943 - 31,929,275
singlet/doubletdoublet
Overlap genenone
Upstream geneCtnnd2, 9630009A06Rik, Dap, EG625796, 5730557B15Rik, Ropn1l, LOC622810, March6, Cmbl, Cct5, A930016P21Rik, LOC667231
Downstream geneTas2r119, 0610007N19Rik, Sema5a, LOC100040962, Sdc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074L10.bB6Ng01-074L10.g
ACCDH891481DH891482
length1,225163
definitionDH891481|Mus musculus domesticus DNA, BAC clone: B6Ng01-074L10, 5' end.DH891482|Mus musculus domesticus DNA, BAC clone: B6Ng01-074L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,928,048 - 31,929,275)(31,764,943 - 31,765,105)
sequence
gaattcatacaaatactgagcaatataataccatcctgttttagaaaata
aaacaatgaaatacagacagacaggactccgctttttataaagatgagtg
gattccttaagtgaatgaaaacctagtccgttactctctcttctttcttc
agacaaaatatagaatttgaagcttttggcaacatgacgaaactcctcaa
aattgctctcatcacatccctggcaatctcaaaatgaggcaggtatttct
acacattgaaatatgagaaactgagcttgtggaatccacaagtgcaaaac
aatttaaaagtgctatcccagctgtcaataaaggatggaacaaaattctc
cactgacttaacattggcagtactgagatttggaaggcagaaagaaggga
tggctattggtgtctatgcatggtgctatcggagctgaagggataagcat
gcccttgggggaaaaataatgtctattacagccatttctttcataaagcc
ggtaattttccctgccttttaatgtgtagcagctctctacctttcagatg
cttgcaaatttcatgcagaatattgaatgtgatatgcaagttattgggac
aaacttaggggaaaggggactttagtcttctcatgccaagcctgcttctg
ctcaccatgtctagactttgtttgcccagagtagttgctttgcatgggct
atgattaccagccaatgacagtgtggttcccaccattgcttgatatggaa
gctgttgccttgatgtgagaagcagggcgtgcatacaaactggggactga
catgcacaaatattgaaaagttcttcaatatttatctctcccatgaaaga
acatggttcatagcagttcacctccaactcaggcatccttacatagccac
agcgggcactttacatgacaccctgcattatctactgtccaactattgtt
gacatatttagaataaagactgacatgttaaatatgtttttaaggggcca
atgccattaaacttcagagtcaatatccataggcttagatttttcaaaac
atacttttaataagggttctaaatgcttaactaacggccctctagctacc
acccacccaagaggtagtggaaaggaagaataatagagcaaaggtgggat
gtgggatctgttaggaaatagttcttaggagcaattcaactgcattgtcg
gaattcgcagtctaaggcctgatat
cagggctaggaagcaggagtgggttggttggtgagcagggggaggggaaa
ctaggaaagggaataacatttgaaatgtaaataaagaaaatatctaatta
aaaaagattaaagataaataaaaacgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_31928048_31929275
seq2: B6Ng01-074L10.b_43_1267 (reverse)

seq1  ATATCA-GCTTTGGACTGCGATATCCTGACAATGCAGGTTGGATTTGCTC  49
      |||||| || || |||||||| || | ||||||||||  | || ||||||
seq2  ATATCAGGCCTTAGACTGCGA-ATTCCGACAATGCAG--TTGAATTGCTC  47

seq1  CTAAGAACTATTTCTAAACAGAT-CCACAT-CCACCTTTGCTCTATTAAT  97
      ||||||||||||||  ||||||| |||||| ||||||||||||||||| |
seq2  CTAAGAACTATTTCCTAACAGATCCCACATCCCACCTTTGCTCTATTATT  97

seq1  CTTTCCTTTCCACTACCTCT--GGTGGGTGGTAGGCTAGAAGGGCGGTTA  145
      | ||||||||||||||||||  ||||||||||| ||||| ||||| ||||
seq2  C-TTCCTTTCCACTACCTCTTGGGTGGGTGGTA-GCTAG-AGGGCCGTTA  144

seq1  GTTAAAGCATTTAAGAACCCTTATTAAAAGTATGTTTTGAAAAATCTAAG  195
      ||| |||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTT-AAGCATTT-AGAACCCTTATTAAAAGTATGTTTTGAAAAATCTAAG  192

seq1  CCTATGGATATTGACTCTGAAGTTTAATGGCATTGGCCCC-TAAAAACAT  244
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCTATGGATATTGACTCTGAAGTTTAATGGCATTGGCCCCTTAAAAACAT  242

seq1  ATTTAACATGTCAGTCTTTATTCTAAATATGTCAACAATAGTTGGACAGT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACATGTCAGTCTTTATTCTAAATATGTCAACAATAGTTGGACAGT  292

seq1  AGATAAATGCAGGGTGTCATGTAAAGTGCCCGCTGTGGCTATGTAAGGAT  344
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAT-AATGCAGGGTGTCATGTAAAGTGCCCGCTGTGGCTATGTAAGGAT  341

seq1  GCCTGAGTTGGAGGTGAACTGCTATGAACCATGTTCTTTCATGGGAGAGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGTTGGAGGTGAACTGCTATGAACCATGTTCTTTCATGGGAGAGA  391

seq1  TAAATATTGAAGAACTTTTCAATATTTGTGCATGTCAGTCCCCAGTTTGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTGAAGAACTTTTCAATATTTGTGCATGTCAGTCCCCAGTTTGT  441

seq1  ATGCACGCCCTGCTTCTCACATCAAGGCAACAGCTTCCATATCAAGCAAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACGCCCTGCTTCTCACATCAAGGCAACAGCTTCCATATCAAGCAAT  491

seq1  GGTGGGAACCACACTGTCATTGGCTGGTAATCATAGCCCATGCAAAGCAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAACCACACTGTCATTGGCTGGTAATCATAGCCCATGCAAAGCAA  541

seq1  CTACTCTGGGCAAACAAAGTCTAGACATGGTGAGCAGAAGCAGGCTTGGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTGGGCAAACAAAGTCTAGACATGGTGAGCAGAAGCAGGCTTGGC  591

seq1  ATGAGAAGACTAAAGTCCCCTTTCCCCTAAGTTTGTCCCAATAACTTGCA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAGACTAAAGTCCCCTTTCCCCTAAGTTTGTCCCAATAACTTGCA  641

seq1  TATCACATTCAATATTCTGCATGAAATTTGCAAGCATCTGAAAGGTAGAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACATTCAATATTCTGCATGAAATTTGCAAGCATCTGAAAGGTAGAG  691

seq1  AGCTGCTACACATTAAAAGGCAGGGAAAATTACCGGCTTTATGAAAGAAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTACACATTAAAAGGCAGGGAAAATTACCGGCTTTATGAAAGAAA  741

seq1  TGGCTGTAATAGACATTATTTTTCCCCCAAGGGCATGCTTATCCCTTCAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTAATAGACATTATTTTTCCCCCAAGGGCATGCTTATCCCTTCAG  791

seq1  CTCCGATAGCACCATGCATAGACACCAATAGCCATCCCTTCTTTCTGCCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGATAGCACCATGCATAGACACCAATAGCCATCCCTTCTTTCTGCCT  841

seq1  TCCAAATCTCAGTACTGCCAATGTTAAGTCAGTGGAGAATTTTGTTCCAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATCTCAGTACTGCCAATGTTAAGTCAGTGGAGAATTTTGTTCCAT  891

seq1  CCTTTATTGACAGCTGGGATAGCACTTTTAAATTGTTTTGCACTTGTGGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTGACAGCTGGGATAGCACTTTTAAATTGTTTTGCACTTGTGGA  941

seq1  TTCCACAAGCTCAGTTTCTCATATTTCAATGTGTAGAAATACCTGCCTCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAAGCTCAGTTTCTCATATTTCAATGTGTAGAAATACCTGCCTCA  991

seq1  TTTTGAGATTGCCAGGGATGTGATGAGAGCAATTTTGAGGAGTTTCGTCA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGATTGCCAGGGATGTGATGAGAGCAATTTTGAGGAGTTTCGTCA  1041

seq1  TGTTGCCAAAAGCTTCAAATTCTATATTTTGTCTGAAGAAAGAAGAGAGA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCAAAAGCTTCAAATTCTATATTTTGTCTGAAGAAAGAAGAGAGA  1091

seq1  GTAACGGACTAGGTTTTCATTCACTTAAGGAATCCACTCATCTTTATAAA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACGGACTAGGTTTTCATTCACTTAAGGAATCCACTCATCTTTATAAA  1141

seq1  AAGCGGAGTCCTGTCTGTCTGTATTTCATTGTTTTATTTTCTAAAACAGG  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGGAGTCCTGTCTGTCTGTATTTCATTGTTTTATTTTCTAAAACAGG  1191

seq1  ATGGTATTATATTGCTCAGTATTTGTATGAATTC  1228
      ||||||||||||||||||||||||||||||||||
seq2  ATGGTATTATATTGCTCAGTATTTGTATGAATTC  1225

seq1: chr15_31764943_31765105
seq2: B6Ng01-074L10.g_75_237

seq1  CAGGGCTAGGAAGCAGGAGTGGGTTGGTTGGTGAGCAGGGGGAGGGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTAGGAAGCAGGAGTGGGTTGGTTGGTGAGCAGGGGGAGGGGAAA  50

seq1  CTAGGAAAGGGAATAACATTTGAAATGTAAATAAAGAAAATATCTAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAAAGGGAATAACATTTGAAATGTAAATAAAGAAAATATCTAATTA  100

seq1  AAAAAGATTAAAGATAAATAAAAACGTGTGTGTGTGTGTGTGTGTGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATTAAAGATAAATAAAAACGTGTGTGTGTGTGTGTGTGTGTGTG  150

seq1  TGTGTGTGTGTGT  163
      |||||||||||||
seq2  TGTGTGTGTGTGT  163