BAC Information

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BAC

Clone NameB6Ng01-074O22
Chromosome15 (Build37)
Map Location 62,267,713 - 62,415,226
singlet/doubletdoublet
Overlap genenone
Upstream geneMyc, Pvt1, LOC100040584, H2afy3
Downstream geneLOC100040430, Tsg101-ps, EG239502
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074O22.bB6Ng01-074O22.g
ACCDH891644DH891645
length1,162269
definitionDH891644|Mus musculus domesticus DNA, BAC clone: B6Ng01-074O22, 5' end.DH891645|Mus musculus domesticus DNA, BAC clone: B6Ng01-074O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,267,713 - 62,268,895)(62,414,958 - 62,415,226)
sequence
gaattcttttgtcaacatctcaacaccttgtcttggttaccattagactc
tatatttcattgattgtgactaccaatatcaacttcctgtatctaagtct
accacacgatctctctagacttcccctgttctctcacactttgtatcttc
tttggcatagagacctattcatttcagcttgaagacatttttaagatcct
tcagatttgcttcaaatacacccgcaccatctgttttttgtttttttttt
ttttgttgttattattgttcgttgttttgtcttttttttttttcccttcc
aattctggtccatttgagctacaagaatatcttcttgattatttttttaa
ccttcctttgttcaatacatataagcaagtctctatgcacctgccaaata
gaaacgttccaactgagaagaaagtctttctttgatctctacaccatcca
tcctcatggagcttttaaataaaatcaaaaccttcccattcggagggcac
tggatcctttctgatctagtctctatgtcccagatctcatctcccactgc
cctccctctggcacactgtgatccagacaaactggttttctttatgttgc
tcaaacccccaagttctcttccatggtgagacctttgtactgcctgttcc
ttccagctggctccctttgtcttggaccttcacactgtgagctcctcctt
ctgagtcaatctcagttcaaacacctgaagacggttcccagagtcagtga
gagccatcctgcctcatttaagccctcgatcaggtacatctcttttatat
caccgtggtttgtatttcaacagcaagtgtctctgtctcataatatttta
tttatttagatttcatttatcgtctttctcaattattgctcaattacaac
atgaaattcaaatggacaaaatctctcttcatggagctaagagatggctc
agtggataacagaacttgtactgctgatatgagttctgagtttgacccct
agccccttacatagacattagcagacgacttttgctgacggctctataat
gggttagagacagcagatcatgaactctgtcctgcattcagctgagcaaa
gcattgagctcaattcagtgaagaccggtcctagcaaaagctgaagtgac
tgaaaatacagc
tttaataattggttactaaaaccaagagaaatccatctgggagatcttta
taaggattttggttcaaaagagtgctcacaacctgagagactcaagacta
tttccagcaactagaaattttgttgtttatgtaaactagattctagcaat
atggagaaagtccattgtaaccttaaaaataaaaatgaaataaaatagat
actatataaaaccatagacctctaatttttgttagtttgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_62267713_62268895
seq2: B6Ng01-074O22.b_45_1206

seq1  GAATTCTTTTGTCAACATCTCAACACCTTGTCTTGGTTACCATTAGACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGTCAACATCTCAACACCTTGTCTTGGTTACCATTAGACTC  50

seq1  TATATTTCATTGATTGTGACTACCAATATCAACTTCCTGTATCTAAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCATTGATTGTGACTACCAATATCAACTTCCTGTATCTAAGTCT  100

seq1  ACCACACGATCTCTCTAGACTTCCCCTGTTCTCTCACACTTTGTATCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACGATCTCTCTAGACTTCCCCTGTTCTCTCACACTTTGTATCTTC  150

seq1  TTTGGCATAGAGACCTATTCATTTCAGCTTGAAGACATTTTTAAGATCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCATAGAGACCTATTCATTTCAGCTTGAAGACATTTTTAAGATCCT  200

seq1  TCAGATTTGCTTCAAATACACCCGCACCATCTGTTTTTTGTTTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTTGCTTCAAATACACCCGCACCATCTGTTTTTTGTTTTTTTTTT  250

seq1  TTTTGTTGTTATTATTGTTCGTTGTTTTGTCTTTTTTTTTTTTCCCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTGTTATTATTGTTCGTTGTTTTGTCTTTTTTTTTTTTCCCTTCC  300

seq1  AATTCTGGTCCATTTGAGCTACAAGAATATCTTCTTGATTATTTTTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGTCCATTTGAGCTACAAGAATATCTTCTTGATTATTTTTTTAA  350

seq1  CCTTCCTTTGTTCAATACATATAAGCAAGTCTCTATGCACCTGCCAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTTGTTCAATACATATAAGCAAGTCTCTATGCACCTGCCAAATA  400

seq1  GAAACGTTCCAACTGAGAAGAAAGTCTTTCTTTGATCTCTACACCATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGTTCCAACTGAGAAGAAAGTCTTTCTTTGATCTCTACACCATCCA  450

seq1  TCCTCATGGAGCTTTTAAATAAAATCAAAACCTTCCCATTCGGAGGGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATGGAGCTTTTAAATAAAATCAAAACCTTCCCATTCGGAGGGCAC  500

seq1  TGGATCCTTTCTGATCTAGTCTCTATGTCCCAGATCTCATCTCCCACTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCTTTCTGATCTAGTCTCTATGTCCCAGATCTCATCTCCCACTGC  550

seq1  CCTCCCTCTGGCACACTGTGATCCAGACAAACTGGTTTTCTTTATGTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCTGGCACACTGTGATCCAGACAAACTGGTTTTCTTTATGTTGC  600

seq1  TCAAACCCCCAAGTTCTCTTCCATGGTGAGACCTTTGTACTGCCTGTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCCCCAAGTTCTCTTCCATGGTGAGACCTTTGTACTGCCTGTTCC  650

seq1  TTCCAGCTGGCTCCCTTTGTCTTGGACCTTCACACTGTGAGCTCCTCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCTGGCTCCCTTTGTCTTGGACCTTCACACTGTGAGCTCCTCCTT  700

seq1  CTGAGTCAATCTCAGTTCAAACACCTGAAGACGGTTCCCAGAGTCAGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCAATCTCAGTTCAAACACCTGAAGACGGTTCCCAGAGTCAGTGA  750

seq1  GAGCCATCCTGCCTCATTTAAGCCCTCGATCAGGTACATCTCTTTTATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCCTGCCTCATTTAAGCCCTCGATCAGGTACATCTCTTTTATAT  800

seq1  CACCGTGGTTTGTATTTCAACAGCAAGTGTCTCTGTCTCATAATATTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGTGGTTTGTATTTCAACAGCAAGTGTCTCTGTCTCATAATATTTTA  850

seq1  TTTATTTAGATTTCATTTATCGTCTTTCTCAATTATTGCTCAATTACAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAGATTTCATTTATCGTCTTTCTCAATTATTGCTCAATTACAAC  900

seq1  ATGAATTCAAAAGGGACAAAATCTCTCTTCATGGAGCTAAAGAGATGGCT  950
      ||||| |  ||| ||||||||||||||||||||||||| |||||||||||
seq2  ATGAAATTCAAATGGACAAAATCTCTCTTCATGGAGCT-AAGAGATGGCT  949

seq1  CAGTGGATAACAGAACTTGTACTGCTGATATGAGGTTCTGAGTTTGAACC  1000
      ||||||||||||||||||||||||||||||||| |||||||||||| |||
seq2  CAGTGGATAACAGAACTTGTACTGCTGATATGA-GTTCTGAGTTTG-ACC  997

seq1  CCTAGCCCCTTACATAGACAATTAGCAAGACGACTTATGCTGACGGCTCT  1050
      ||||||||||||||||||| |||||| ||||||||| |||||||||||||
seq2  CCTAGCCCCTTACATAGAC-ATTAGC-AGACGACTTTTGCTGACGGCTCT  1045

seq1  ATAATTGGGGTTAGAGACAGGCAGATCATGAACTCTGTCTTGCCATCCAG  1100
      |||||  |||||||||||| ||||||||||||||||||| || ||| |||
seq2  ATAAT--GGGTTAGAGACA-GCAGATCATGAACTCTGTCCTG-CATTCAG  1091

seq1  CAGAGCCAAAAAGCAGTGAGCTTCCCATTCAGTGAGAGACCCTGTCTCAA  1150
      | ||||   |||||| ||||||  | ||||||||| |||||     ||  
seq2  CTGAGC---AAAGCATTGAGCT--CAATTCAGTGA-AGACC---GGTCCT  1132

seq1  AGCAAAAAAGCTGAAGTGACAGAGAAATACAGC  1183
      |||  ||||||||||||||| || |||||||||
seq2  AGC--AAAAGCTGAAGTGACTGA-AAATACAGC  1162

seq1: chr15_62414958_62415226
seq2: B6Ng01-074O22.g_72_340 (reverse)

seq1  CACACACACACACACACACACACACACACACAAACTAACAAAAATTAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACAAACTAACAAAAATTAGAG  50

seq1  GTCTATGGTTTTATATAGTATCTATTTTATTTCATTTTTATTTTTAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATGGTTTTATATAGTATCTATTTTATTTCATTTTTATTTTTAAGGT  100

seq1  TACAATGGACTTTCTCCATATTGCTAGAATCTAGTTTACATAAACAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGGACTTTCTCCATATTGCTAGAATCTAGTTTACATAAACAACAA  150

seq1  AATTTCTAGTTGCTGGAAATAGTCTTGAGTCTCTCAGGTTGTGAGCACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTAGTTGCTGGAAATAGTCTTGAGTCTCTCAGGTTGTGAGCACTC  200

seq1  TTTTGAACCAAAATCCTTATAAAGATCTCCCAGATGGATTTCTCTTGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAACCAAAATCCTTATAAAGATCTCCCAGATGGATTTCTCTTGGTT  250

seq1  TTAGTAACCAATTATTAAA  269
      |||||||||||||||||||
seq2  TTAGTAACCAATTATTAAA  269