BAC Information

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BAC

Clone NameB6Ng01-074P15
Chromosome15 (Build37)
Map Location 80,239,503 - 80,391,757
singlet/doubletdoublet
Overlap geneEnthd1
Upstream geneCsnk1e, LOC675798, LOC100041676, Kcnj4, Kdelr3, Ddx17, Dmc1, 4933432B09Rik, Pgea1, Tomm22, Josd1, Gtpbp1, Unc84b, Dnalc4, Npcd, Nptxr, Cbx6, LOC100042748, Apobec3, Cbx7, Pdgfb, Rpl3, Syngr1, Map3k7ip1, Mgat3, EG666948, Smcr7l, Atf4, Rps19bp1, Cacna1i
Downstream geneGrap2, AW544981, Tnrc6b, Adsl, LOC625672, Rutbc3, Mkl1, LOC675966, Mchr1, Slc25a17, St13, Xpnpep3, Dnajb7, Rbx1, EG383080
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074P15.bB6Ng01-074P15.g
ACCDH891678DH891679
length895656
definitionDH891678|Mus musculus domesticus DNA, BAC clone: B6Ng01-074P15, 5' end.DH891679|Mus musculus domesticus DNA, BAC clone: B6Ng01-074P15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,390,893 - 80,391,757)(80,239,503 - 80,240,156)
sequence
ttagggccgagtaccggtttaagtttttaatgcgtttttatattaaccta
aatgcttcctcttctatgtatggggaagctgtcagactcctgctaatcac
tccaggcctaagggagttcctcacgccatgtcatttataaatagcacttt
gatactgttgaatgttaaaaccacacctttttttccctgaaagcgagtaa
agaaagtaatcgaagctttccctctagtttgctaggctaagatgctgctt
tggatactgtgttagctgtaatccacaggaggtagagtatttatcttaac
gccggctctctagatagaccagagagcagcacctactcaggtttgatcag
agtgcttcatggttctgcagggaacagggttctgggtacgaggaggacct
cacactcaattttcaccaccattcaaattatttccaggacacagtgtgta
taacaacagcttttgttaagaaagaggtgtcagagtgcaaattccccctg
aactatgaatctgtctcctctgtgtgtacgtctttaaactcgtactcctt
gtcaagggagctgagcaatattttctgcagaaccttttaggagcagatag
actacctatattctctggatagctgaggtcagtcttgtgagggattttcc
ccgtgttttatcctaagcacacctatatagagtcccttttccttcctcag
gcttggtgatgtgacaaggcttttctttgggaaactaaaaattttttttt
tttttttcagactaacttgggtctccctgtaaaacatttttttttttttt
tttttttttggggaaacttacaacaacattttttttgtatttttccttgg
ccggaaattcatactttatccgggtggaggatgaattcatttgtt
gaattcaagcatggattcaacccataattctaggtttgttccaagctggc
tggaactctcttggaattttggtgcttcttgcccctgttctagactctca
tgtccttggtctaggccaggacctgggtctgggctgtggtcccagccttt
gcagcactcctgaatctcatccttccctgagttctgagccttcgctgatt
ggccagtggagtcagatgtccctcctcctgacccccacagctcccccctt
ggctgatatcatttgaatccttgagactcttcctgtcagctctggctgat
gttacgcaggccacagatgaggtgctggagaccatgggggtgtaaagcag
tgggtatttttctctcacacagcttgggaggcaggggtatcaggcagatt
agggtctcagtgcttggtgagatttatcatcctgacttacagacacagtt
cctccaggccttgtgaccttggcctaaatggagcatctcctgagagacat
cctgtgtttactttgggtcctcacatcttctcctttgtgcctgggggtgg
ggggtggagacagccagatctaatctcttcttgttctcataaggatgcta
ttcctactatgagcactctacccctcctgtttctcatctagtccaaatca
aaggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_80390893_80391757
seq2: B6Ng01-074P15.b_43_936 (reverse)

seq1  ACAAATG-ATTCAT-CTCCACCTGG-TAAAGTATCGATTTCCTG-CAAGG  46
      ||||||| |||||| ||||||| || ||||||||  |||||| | |||||
seq2  ACAAATGAATTCATCCTCCACCCGGATAAAGTATGAATTTCCGGCCAAGG  50

seq1  -AAAGTAC--AAAAAATG-TGGTGTAAGTTCCTC----AAAAAAAAAAAA  88
       ||| |||  |||||||| || |||||||| | |    ||||||||||||
seq2  AAAAATACAAAAAAAATGTTGTTGTAAGTTTCCCCAAAAAAAAAAAAAAA  100

seq1  AAAAAAAATG-TCTACA-GGAGA-CCAAGTTAGTCTGAAAAAAAAAAAAA  135
      |||||||||| | |||| ||||| ||||||||||||||||||||||||||
seq2  AAAAAAAATGTTTTACAGGGAGACCCAAGTTAGTCTGAAAAAAAAAAAAA  150

seq1  ----TTTTAGTTTCC--AAG-AAAGCC-TGTCACATCACC-AGCCTGAGG  176
          |||||||||||  ||| |||||| |||||||||||| |||||||||
seq2  AAATTTTTAGTTTCCCAAAGAAAAGCCTTGTCACATCACCAAGCCTGAGG  200

seq1  AAGGAAA--GGACTCTATATAGGTGTGCTTAGGAT-AAACAC-GGGAAAA  222
      |||||||  |||||||||||||||||||||||||| |||||| |||||||
seq2  AAGGAAAAGGGACTCTATATAGGTGTGCTTAGGATAAAACACGGGGAAAA  250

seq1  TCCCTCACAAGACTGACCTCAGCTATCCAGAGAATATAGGTAGTCTATCT  272
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCACAAGACTGACCTCAGCTATCCAGAGAATATAGGTAGTCTATCT  300

seq1  GCTCCTAAAAGGTTCTGCAGAAAATATTGCTCAGCTCCCTTGACAAGGAG  322
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTAAAAGGTTCTGCAGAAAATATTGCTCAGCTCCCTTGACAAGGAG  350

seq1  TACGAGTTTAAAGACGTACACACAGAGGAGACAGATTCATAGTTCAGGGG  372
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGAGTTTAAAGACGTACACACAGAGGAGACAGATTCATAGTTCAGGGG  400

seq1  GAATTTGCACTCTGACACCTCTTTCTTAACAAAAGCTGTTGTTATACACA  422
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGCACTCTGACACCTCTTTCTTAACAAAAGCTGTTGTTATACACA  450

seq1  CTGTGTCCTGGAAATAATTTGAATGGTGGTGAAAATTGAGTGTGAGGTCC  472
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCCTGGAAATAATTTGAATGGTGGTGAAAATTGAGTGTGAGGTCC  500

seq1  TCCTCGTACCCAGAACCCTGTTCCCTGCAGAACCATGAAGCACTCTGATC  522
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGTACCCAGAACCCTGTTCCCTGCAGAACCATGAAGCACTCTGATC  550

seq1  AAACCTGAGTAGGTGCTGCTCTCTGGTCTATCTAGAGAGCCGGCGTTAAG  572
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGAGTAGGTGCTGCTCTCTGGTCTATCTAGAGAGCCGGCGTTAAG  600

seq1  ATAAATACTCTACCTCCTGTGGATTACAGCTAACACAGTATCCAAAGCAG  622
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATACTCTACCTCCTGTGGATTACAGCTAACACAGTATCCAAAGCAG  650

seq1  CATCTTAGCCTAGCAAACTAGAGGGAAAGCTTCGATTACTTTCTTTACTC  672
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTAGCCTAGCAAACTAGAGGGAAAGCTTCGATTACTTTCTTTACTC  700

seq1  GCTTTCAGGGAAAAAAAGGTGTGGTTTTAACATTCAACAGTATCAAAGTG  722
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAGGGAAAAAAAGGTGTGGTTTTAACATTCAACAGTATCAAAGTG  750

seq1  CTATTTATAAATGACATGGCGTGAGGAACTCCCTTAGGCCTGGAGTGATT  772
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTATAAATGACATGGCGTGAGGAACTCCCTTAGGCCTGGAGTGATT  800

seq1  AGCAGGAGTCTGACAGCTTCCCCATACATAGAAGAGGAAGCATTTAGGTT  822
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGTCTGACAGCTTCCCCATACATAGAAGAGGAAGCATTTAGGTT  850

seq1  AATATAAAAACGCATT-CAAACTTAAACCGGTACTCGGCCCTAA  865
      ||||||||||||||||  ||||||||||||||||||||||||||
seq2  AATATAAAAACGCATTAAAAACTTAAACCGGTACTCGGCCCTAA  894

seq1: chr15_80239503_80240156
seq2: B6Ng01-074P15.g_71_726

seq1  GAATTCAAGCATGGATTCAACCCATAATTCTAGGTTTGTTCCAAGCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCATGGATTCAACCCATAATTCTAGGTTTGTTCCAAGCTGGC  50

seq1  TGGAACTCTCTTGGAATTTTGGTGCTTCTTGCCCCTGTTCTAGACTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCTCTTGGAATTTTGGTGCTTCTTGCCCCTGTTCTAGACTCTCA  100

seq1  TGTCCTTGGTCTAGGCCAGGACCTGGGTCTGGGCTGTGGTCCCAGCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGGTCTAGGCCAGGACCTGGGTCTGGGCTGTGGTCCCAGCCTTT  150

seq1  GCAGCACTCCTGAATCTCATCCTTCCCTGAGTTCTGAGCCTTCGCTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCACTCCTGAATCTCATCCTTCCCTGAGTTCTGAGCCTTCGCTGATT  200

seq1  GGCCAGTGGAGTCAGATGTCCCTCCTCCTGACCCCCACAGCTCCCCCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTGGAGTCAGATGTCCCTCCTCCTGACCCCCACAGCTCCCCCCTT  250

seq1  GGCTGATATCATTTGAATCCTTGAGACTCTTCCTGTCAGCTCTGGCTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGATATCATTTGAATCCTTGAGACTCTTCCTGTCAGCTCTGGCTGAT  300

seq1  GTTACGCAGGCCACAGATGAGGTGCTGGAGACCATGGGGGTGTAAAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACGCAGGCCACAGATGAGGTGCTGGAGACCATGGGGGTGTAAAGCAG  350

seq1  TGGGTATTTTTCTCTCACACAGCTTGGGAGGCAGGGGTATCAGGCAGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTATTTTTCTCTCACACAGCTTGGGAGGCAGGGGTATCAGGCAGATT  400

seq1  AGGGTCTCAGTGCTTGGTGAGATTTATCATCCTGACTTACAGACACAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTCAGTGCTTGGTGAGATTTATCATCCTGACTTACAGACACAGTT  450

seq1  CCTCCAGGCCTTGTGACCTTGGCCTAAATGGAGCATCTCCTGAGAGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGGCCTTGTGACCTTGGCCTAAATGGAGCATCTCCTGAGAGACAT  500

seq1  CCTGTGTTTACTTTGGGTCCTCACATCTTCTCCTTTGTGCCTGGGGGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTTTACTTTGGGTCCTCACATCTTCTCCTTTGTGCCTGGGGGTGG  550

seq1  GGGGTGGAGACAGCCAGATCTAATCTCTTCTTGTTCTCATAAGGATGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGAGACAGCCAGATCTAATCTCTTCTTGTTCTCATAAGGATGCTA  600

seq1  TTCCTACTATGAGCACTCTA-CCCTCCTG-CTCTCATCTAGTCCAAATCA  648
      |||||||||||||||||||| ||||||||  |||||||||||||||||||
seq2  TTCCTACTATGAGCACTCTACCCCTCCTGTTTCTCATCTAGTCCAAATCA  650

seq1  AAGGCT  654
      ||||||
seq2  AAGGCT  656