BAC Information

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BAC

Clone NameB6Ng01-075G17
Chromosome15 (Build37)
Map Location 90,960,288 - 91,144,743
singlet/doubletdoublet
Overlap geneEG635871, Abcd2, LOC545126, Slc2a13
Upstream geneAlg10b, Cpne8, EG627342, LOC100042462, LOC100042471, EG667682, Tcea1-ps1, Spn-ps, Kif21a
Downstream geneLrrk2, Muc19, Smgc, LOC100042529, Cntn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075G17.bB6Ng01-075G17.g
ACCDH891987DH891988
length1,115951
definitionDH891987|Mus musculus domesticus DNA, BAC clone: B6Ng01-075G17, 5' end.DH891988|Mus musculus domesticus DNA, BAC clone: B6Ng01-075G17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,143,632 - 91,144,743)(90,960,288 - 90,960,896)
sequence
gaattccactgctgtttaaagcaagatatgttagattctgctgtggaaac
agcaatcctgagttacaagagcaagctaataaataaaaaaataaaataaa
ataaaaaatcaaggaccgcaaaggaagtattagcagttatagaaagatag
gcggaattattctgaagatgttcctgaaggtcataatatgggtttgcata
ctattgctgtcgggaagaattttaggtagggaggaacatgaatgaatggc
ttgggatgagaaggcaaagttctgatgaacaaagaattctccgaagagca
tgtaccatccaagacaaggcatttggaagttcatgaatacaagagctata
gcgcctacatttttttttattttcttttttttaattagatattttcttta
tttacatttcaaatgctatgccgaaagttccctataccctccccctgccc
tgctcccttacccacgctctctctctccctcttcttggccctagtgttcc
cctgtactggggcatataaagtccaatgggcctctctttccaatgatggc
caactaggccatcttctgctacataagcagctagagacacgagctctggt
ggtactggttagttcatattgttattccacctataggattgcagacccct
tcagctccttgggtactttctctatctcctctattgggggccctgtgttc
catcatatagatgactgtgagaattcacttctatatttgccaggcactgg
catagcctcacaggagacagctatatcagggtcctttcagcaaaatcttg
ctggcatatgcaatagtgtctgggtttggtggctgatttttaattggcct
acattaaaattgggtctataacagcccaatttaaactgatcacaattata
taatacttatactttataacgtagtgtttccctgaaatcatatttgacat
aatgcaacatgccatcagagtatgccattggtttgaacacactagtagca
gacacccagccaccagtagtgtgtcagtgccacgtttcaggaagaaatca
gagcactgccctcgtgccttttaccaagaatggagcccagatgaaaattt
ctctcctcttctctc
gaattcagggaagctgtcctttgcaactgcatagtggccatcttccaaga
aatatttttttacgcaccgcctgagagaagtgtctggcagtgacaggcaa
gagtctcctaaacaaccctttctttcactgattttttttcatttctattt
cattaattttgtctgtaggttttattatttcttttcattgactcctttgg
ggtgttgtttattcttgcttttccaagtcctttcagtacagtattaactt
cttcaatatactctttccagttttttgatgtaggttctcagtgctgtgaa
cagtttcttagtactgacttttcattgtatcccacagattctggtaggtt
gtgttttcgttttaattaaattttagaaaatctttaatttccttcttaat
ttttttccttggtttccatccagtagtctgctgtttagcttctgtgagtt
ttgtgccttttgagatttctattttcaataactagctttgtttcttggtg
gtcagatagtatgcaaagtgttatttccattttcccaaatttttgagact
tgcttcatgtcttactgtgtgactgagtttgaagaaagtcccatgggttg
ctaattctaacattttgatggaatgtagatatctgtgatgtctgttgtta
tttatgatgtcattcagcaccagagattttctatttagttttggtctgga
tgatctgtctttttggtgggaatgaagtctccctctattcctgtgttggt
agtcagtctgtaaatttagatctaatattggttttacaagactgtgtgct
gttatatctggcacgtacatgtttagaattctattatgctctagttgatt
tttcatttaatgatgatgaaacatcctttctctgtctttcagagactaat
tctttctcttgtcttctctgtctattcttctggtttagcttgatgtctat
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_91143632_91144743
seq2: B6Ng01-075G17.b_43_1157 (reverse)

seq1  GAGAGAAGAGGAGAGAAA-TCTCATCTGGGCT-CACTCTTGGTTAAAAGG  48
      |||||||||||||||||| | ||||||||||| || |||||| |||||||
seq2  GAGAGAAGAGGAGAGAAATTTTCATCTGGGCTCCATTCTTGG-TAAAAGG  49

seq1  CACCGAGGGCAAGTGCTCTGATTTCTTCCTG-AACGTGGCACTGACACAC  97
      || ||||||| |||||||||||||||||||| ||||||||||||||||||
seq2  CA-CGAGGGC-AGTGCTCTGATTTCTTCCTGAAACGTGGCACTGACACAC  97

seq1  TACTGGTGGCTGGGTGTCTGCTACTAGTGTGTTCAAACCAATGGCATACT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTGGCTGGGTGTCTGCTACTAGTGTGTTCAAACCAATGGCATACT  147

seq1  CTGATGGCATG-TGCATTATGTCAAATATGATTTCA-GGAAACACTACGT  195
      ||||||||||| |||||||||||||||||||||||| |||||||||||||
seq2  CTGATGGCATGTTGCATTATGTCAAATATGATTTCAGGGAAACACTACGT  197

seq1  TATAAAGTATAAGTATTATATAATTGTGATCAGTTTAAATTGGGCTGTTA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTATAAGTATTATATAATTGTGATCAGTTTAAATTGGGCTGTTA  247

seq1  TAGACCCAA-TTTAATGTAGGCCAATTAAAAATCAGCCACCAAACCCAGA  294
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCCAATTTTAATGTAGGCCAATTAAAAATCAGCCACCAAACCCAGA  297

seq1  CACTATTGCATATGCCAGCAAGATTTTGCTGAAAGGACCCTGATATAGCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATTGCATATGCCAGCAAGATTTTGCTGAAAGGACCCTGATATAGCT  347

seq1  GTCTCCTGTGAGGCTATGCCAGTGCCTGGCAAATATAGAAGTGAATTCTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTGTGAGGCTATGCCAGTGCCTGGCAAATATAGAAGTGAATTCTC  397

seq1  ACAGTCATCTATATGATGGAACACAGGGCCCCCAATAGAGGAGATAGAGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCATCTATATGATGGAACACAGGGCCCCCAATAGAGGAGATAGAGA  447

seq1  AAGTACCCAAGGAGCTGAAGGGGTCTGCAATCCTATAGGTGGAATAACAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCCAAGGAGCTGAAGGGGTCTGCAATCCTATAGGTGGAATAACAA  497

seq1  TATGAACTAACCAGTACCACCAGAGCTCGTGTCTCTAGCTGCTTATGTAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACTAACCAGTACCACCAGAGCTCGTGTCTCTAGCTGCTTATGTAG  547

seq1  CAGAAGATGGCCTAGTTGGCCATCATTGGAAAGAGAGGCCCATTGGACTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGATGGCCTAGTTGGCCATCATTGGAAAGAGAGGCCCATTGGACTT  597

seq1  TATATGCCCCAGTACAGGGGAACACTAGGGCCAAGAAGAGGGAGAGAGAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCCCCAGTACAGGGGAACACTAGGGCCAAGAAGAGGGAGAGAGAG  647

seq1  AGCGTGGGTAAGGGAGCAGGGCAGGGGGAGGGTATAGGGAACTTTCGGCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGGGTAAGGGAGCAGGGCAGGGGGAGGGTATAGGGAACTTTCGGCA  697

seq1  TAGCATTTGAAATGTAAATAAAGAAAATATCTAATTAAAAAAAAGAAAAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTGAAATGTAAATAAAGAAAATATCTAATTAAAAAAAAGAAAAT  747

seq1  AAAAAAAAATGTAGGCGCTATAGCTCTTGTATTCATGAACTTCCAAATGC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATGTAGGCGCTATAGCTCTTGTATTCATGAACTTCCAAATGC  797

seq1  CTTGTCTTGGATGGTACATGCTCTTCGGAGAATTCTTTGTTCATCAGAAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTTGGATGGTACATGCTCTTCGGAGAATTCTTTGTTCATCAGAAC  847

seq1  TTTGCCTTCTCATCCCAAGCCATTCATTCATGTTCCTCCCTACCTAAAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTCTCATCCCAAGCCATTCATTCATGTTCCTCCCTACCTAAAAT  897

seq1  TCTTCCCGACAGCAATAGTATGCAAACCCATATTATGACCTTCAGGAACA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCGACAGCAATAGTATGCAAACCCATATTATGACCTTCAGGAACA  947

seq1  TCTTCAGAATAATTCCGCCTATCTTTCTATAACTGCTAATACTTCCTTTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGAATAATTCCGCCTATCTTTCTATAACTGCTAATACTTCCTTTG  997

seq1  CGGTCCTTGATTTTTTATTTTATTTTATTTTTTTATTTATTAGCTTGCTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCCTTGATTTTTTATTTTATTTTATTTTTTTATTTATTAGCTTGCTC  1047

seq1  TTGTAACTCAGGATTGCTGTTTCCACAGCAGAATCTAACATATCTTGCTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACTCAGGATTGCTGTTTCCACAGCAGAATCTAACATATCTTGCTT  1097

seq1  TAAACAGCAGTGGAATTC  1112
      ||||||||||||||||||
seq2  TAAACAGCAGTGGAATTC  1115

seq1: chr15_90960288_90960896
seq2: B6Ng01-075G17.g_68_676

seq1  GAATTCAGGGAAGCTGTCCTTTGCAACTGCATAGTGGCCATCTTCCAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGAAGCTGTCCTTTGCAACTGCATAGTGGCCATCTTCCAAGA  50

seq1  AATATTTTTTTACGCACCGCCTGAGAGAAGTGTCTGGCAGTGACAGGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTTTACGCACCGCCTGAGAGAAGTGTCTGGCAGTGACAGGCAA  100

seq1  GAGTCTCCTAAACAACCCTTTCTTTCACTGATTTTTTTTCATTTCTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCCTAAACAACCCTTTCTTTCACTGATTTTTTTTCATTTCTATTT  150

seq1  CATTAATTTTGTCTGTAGGTTTTATTATTTCTTTTCATTGACTCCTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTTTGTCTGTAGGTTTTATTATTTCTTTTCATTGACTCCTTTGG  200

seq1  GGTGTTGTTTATTCTTGCTTTTCCAAGTCCTTTCAGTACAGTATTAACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTGTTTATTCTTGCTTTTCCAAGTCCTTTCAGTACAGTATTAACTT  250

seq1  CTTCAATATACTCTTTCCAGTTTTTTGATGTAGGTTCTCAGTGCTGTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATATACTCTTTCCAGTTTTTTGATGTAGGTTCTCAGTGCTGTGAA  300

seq1  CAGTTTCTTAGTACTGACTTTTCATTGTATCCCACAGATTCTGGTAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTTAGTACTGACTTTTCATTGTATCCCACAGATTCTGGTAGGTT  350

seq1  GTGTTTTCGTTTTAATTAAATTTTAGAAAATCTTTAATTTCCTTCTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCGTTTTAATTAAATTTTAGAAAATCTTTAATTTCCTTCTTAAT  400

seq1  TTTTTTCCTTGGTTTCCATCCAGTAGTCTGCTGTTTAGCTTCTGTGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCTTGGTTTCCATCCAGTAGTCTGCTGTTTAGCTTCTGTGAGTT  450

seq1  TTGTGCCTTTTGAGATTTCTATTTTCAATAACTAGCTTTGTTTCTTGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCTTTTGAGATTTCTATTTTCAATAACTAGCTTTGTTTCTTGGTG  500

seq1  GTCAGATAGTATGCAAAGTGTTATTTCCATTTTCCCAAATTTTTGAGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATAGTATGCAAAGTGTTATTTCCATTTTCCCAAATTTTTGAGACT  550

seq1  TGCTTCATGTCTTACTGTGTGACTGAGTTTGAAGAAAGTCCCATGGGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCATGTCTTACTGTGTGACTGAGTTTGAAGAAAGTCCCATGGGTTG  600

seq1  CTAATTCTA  609
      |||||||||
seq2  CTAATTCTA  609