BAC Information

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BAC

Clone NameB6Ng01-075L01
Chromosome15 (Build37)
Map Location 57,746,630 - 57,856,577
singlet/doubletdoublet
Overlap geneWdr67, BC030396, 9130401M01Rik
Upstream geneLOC100040067, LOC100039984, BC026439, Zhx2, Derl1
Downstream geneZhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32, 8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e, EG631797, Tmem65, EG546638, Trmt12, Rnf139, Tatdn1, Ndufb9, Mtss1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075L01.bB6Ng01-075L01.g
ACCDH892179DH892180
length1,167925
definitionDH892179|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L01, 5' end.DH892180|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,746,630 - 57,747,793)(57,855,654 - 57,856,577)
sequence
gaattctccaaaaatagtaaacttagacaagtatcactgtgcattctgta
caaagtttgcccgtgaaagtagtgcatgatgacgaacaaatatatatcaa
gtctagaaaagcagagtgggcagaaactaccccgtgttgctcttctccac
gcacagcaagcagcatttatatttatccatctttccccatgtatacacca
tttcttttgcatatttatgttaattatatgtttgtttgtgtatgagtaat
ttaaagctcaaggttaaaatggttgaattttccacatagctttagtgcat
actctatgtatctataggataatattgaggaattaactccacttcttacc
attggagtagaagtctgattcatgggttttcgaagaatgatgtaaagcac
ttcactggcatggagtgagcgctgtgaattataggtcaggttcagggaca
cagcgatgaacatgtagtccttagaacacgcacttgccagggcactgtgg
aggtctcagaggtggagctataactcacgctttgtggagcgttttatgtc
acagaaagactctcctatcccgttgcctattcgttgtaatgctgtttgta
tgtgcctttttactgtcgtctttgccactaaactataagtgacaaaataa
ccttgtctccattattcctagtgtctggcttcatcagttctgacatgaag
taagttttctagtatctagtgaataaatgaatgttagctttctgaactgt
ttagaaatccttctaagactgattctagggacaagaggaacatcggtagg
aaggataagcaggcaggaagccttcagtagaacccaatacataaaagccg
gtatgtggtgtggagtgtaacgtttagatggttgtgttttgacagaatta
tagtgaacattgtttcacagcacttctgaataccatcccaaagtcttgcg
ggtttttgaatgtggcttttgatggctcaggcgattcctttcattgctgg
ggaccatcaggaaacatcttattgtttttgactttgcatggaaacagtaa
gcagacgctttcacatgtgcctttatttactttagggagtatcgtcgact
attttccagttacttactgatgacgtacgaggcccggctgaatcttaaag
cgacttaatggctggtg
gaattcactgggtaataagtctttcgctggagatttgagcccaggacctg
tacatgctaggcaatcagtattccaccgagctagccatggtgctggactt
gacactaatgggtgagtgtccgcagttgagcaggactttatgtagcttcc
ctcctcctctcctaacagcagtgatggggaagacaggtagggctggagga
ggcctagagaggatgcagctgcctgaggttagggccagaggcagcatagg
ccagccatgagaagtgtcctctcgctccatccaccctgtcaccttgatgt
ctacagagaggtgcagatgccatttttaagcctctgccagccctttctgt
cgctggctttctgtgaagatcacggctgaggatagcagtgggagactgtg
tgcttcagctcttctgctcccagtacaatgacctctgtggcctccagaga
agttagagctgtagattgcaattcaattcaatattcaacattgcaattca
atatttaatcttaggtttgtgcatgctaaaatcagatgtgtgccgtgtca
gtgagctccattgctaatccagtgtatggaccgtggtgttctcctcccgt
gatactttacatgtgtcccatgttcagggatccccaacaccccctttcaa
tgtgtgggtaaatgcacgtgtgtggaggtgagggagaggccaggtccccc
gttgactttgcgtttgctgtgtaggccctgctcaggagcttccagggacc
cacctgtctctgcctcccatctgttttcacagggattgcaggggcttacc
tccatgcatgctttttcacgggttcccaggatcaaaagcagtcctcaagc
acataaggcgggtgttttactgtctgacaatccctcgggcaccgcttctc
acttgtttgccctggccggcctcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_57746630_57747793
seq2: B6Ng01-075L01.b_45_1211

seq1  GAATTCTCCAAAAATAGTAAACTTAGACAAGTATCACTGTGCATTCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAAAAATAGTAAACTTAGACAAGTATCACTGTGCATTCTGTA  50

seq1  CAAAGTTTGCCCGTGAAAGTAGTGCATGATGACGAACAAATATATATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTTGCCCGTGAAAGTAGTGCATGATGACGAACAAATATATATCAA  100

seq1  GTCTAGAAAAGCAGAGTGGGCAGAAACTACCCCGTGTTGCTCTTCTCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGAAAAGCAGAGTGGGCAGAAACTACCCCGTGTTGCTCTTCTCCAC  150

seq1  GCACAGCAAGCAGCATTTATATTTATCCATCTTTCCCCATGTATACACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCAAGCAGCATTTATATTTATCCATCTTTCCCCATGTATACACCA  200

seq1  TTTCTTTTGCATATTTATGTTAATTATATGTTTGTTTGTGTATGAGTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGCATATTTATGTTAATTATATGTTTGTTTGTGTATGAGTAAT  250

seq1  TTAAAGCTCAAGGTTAAAATGGTTGAATTTTCCACATAGCTTTAGTGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCTCAAGGTTAAAATGGTTGAATTTTCCACATAGCTTTAGTGCAT  300

seq1  ACTCTATGTATCTATAGGATAATATTGAGGAATTAACTCCACTTCTTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATGTATCTATAGGATAATATTGAGGAATTAACTCCACTTCTTACC  350

seq1  ATTGGAGTAGAAGTCTGATTCATGGGTTTTCGAAGAATGATGTAAAGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGTAGAAGTCTGATTCATGGGTTTTCGAAGAATGATGTAAAGCAC  400

seq1  TTCACTGGCATGGAGTGAGCGCTGTGAATTATAGGTCAGGTTCAGGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGGCATGGAGTGAGCGCTGTGAATTATAGGTCAGGTTCAGGGACA  450

seq1  CAGCGATGAACATGTAGTCCTTAGAACACGCACTTGCCAGGGCACTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGATGAACATGTAGTCCTTAGAACACGCACTTGCCAGGGCACTGTGG  500

seq1  AGGTCTCAGAGGTGGAGCTATAACTCACGCTTTGTGGAGCGTTTTATGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCAGAGGTGGAGCTATAACTCACGCTTTGTGGAGCGTTTTATGTC  550

seq1  ACAGAAAGACTCTCCTATCCCGTTGCCTATTCGTTGTAATGCTGTTTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGACTCTCCTATCCCGTTGCCTATTCGTTGTAATGCTGTTTGTA  600

seq1  TGTGCCTTTTTACTGTCGTCTTTGCCACTAAACTATAAGTGACAAAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTTTTTACTGTCGTCTTTGCCACTAAACTATAAGTGACAAAATAA  650

seq1  CCTTGTCTCCATTATTCCTAGTGTCTGGCTTCATCAGTTCTGACATGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCTCCATTATTCCTAGTGTCTGGCTTCATCAGTTCTGACATGAAG  700

seq1  TAAGTTTTCTAGTATCTAGTGAATAAATGAATGTTAGCTTTCTGAACTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTTCTAGTATCTAGTGAATAAATGAATGTTAGCTTTCTGAACTGT  750

seq1  TTAGAAATCCTTCTAAGACTGATTCTAGGGACAAGAGGAACATCGGTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATCCTTCTAAGACTGATTCTAGGGACAAGAGGAACATCGGTAGG  800

seq1  AAGGATAAGCAGGCAGGAAGCCTTCAGTAGAACCCAATACATAAAAGCCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATAAGCAGGCAGGAAGCCTTCAGTAGAACCCAATACATAAAAGCCG  850

seq1  GTATGTGGTGTGGAGTGTAACGTTTAGATGGTTGTGTTTTGACAGAATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGGTGTGGAGTGTAACGTTTAGATGGTTGTGTTTTGACAGAATTA  900

seq1  TAGTGAACATTG-TTCACAGCACTTCTGAATACCATCCCAAAGTCTTGC-  948
      |||||||||||| |||||||||||||||||||||||||||||||||||| 
seq2  TAGTGAACATTGTTTCACAGCACTTCTGAATACCATCCCAAAGTCTTGCG  950

seq1  GGTTTTTGAATGTGGCTTTTGATGGCTCAGGCGATTCC-TTCATTGCTGG  997
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGTTTTTGAATGTGGCTTTTGATGGCTCAGGCGATTCCTTTCATTGCTGG  1000

seq1  GGACCATCAGGGAAACATCT--ATGTTTTTGAC-TTGCATGGAAACAGGT  1044
      ||||||||| ||||||||||   |||||||||| ||||||||||||| ||
seq2  GGACCATCA-GGAAACATCTTATTGTTTTTGACTTTGCATGGAAACA-GT  1048

seq1  AAGCAGACGCTTTCAACATGTGCCTT--ATTAC-TTAGGGAGTTATCGTC  1091
      |||||||||||||| |||||||||||   |||| |||||||| |||||||
seq2  AAGCAGACGCTTTC-ACATGTGCCTTTATTTACTTTAGGGAG-TATCGTC  1096

seq1  GACTA--TTCCAGTTACTTACTGATGACGTACGAAGCCCGGCTGAGTTCT  1139
      |||||  ||||||||||||||||||||||||||| ||||||||||  |||
seq2  GACTATTTTCCAGTTACTTACTGATGACGTACGAGGCCCGGCTGA-ATCT  1145

seq1  TAGAAAGCGACTTTAAGTGCTGGTG  1164
      |  |||||||| ||||  |||||||
seq2  T--AAAGCGAC-TTAATGGCTGGTG  1167

seq1: chr15_57855654_57856577
seq2: B6Ng01-075L01.g_67_990 (reverse)

seq1  TGAGGCCGGCCAGGGCAAAACAGTGAGAAGCGGTGGCCGAGGGATTGTCA  50
      |||||||||||||||||||  |||||||||||||| ||||||||||||||
seq2  TGAGGCCGGCCAGGGCAAACAAGTGAGAAGCGGTGCCCGAGGGATTGTCA  50

seq1  GACAGTAAAACACCCGCCTTATGTGCCTGAGGACTGCTTTTGATCCTGGG  100
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GACAGTAAAACACCCGCCTTATGTGCTTGAGGACTGCTTTTGATCCTGGG  100

seq1  AACCCGTGAAAAAGCATGCATGGAGGTAAGCCCCTGCAATCCCTGTGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGTGAAAAAGCATGCATGGAGGTAAGCCCCTGCAATCCCTGTGAAA  150

seq1  ACAGATGGGAGGCAGAGACAGGTGGGTCCCTGGAAGCTCCTGAGCAGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGGGAGGCAGAGACAGGTGGGTCCCTGGAAGCTCCTGAGCAGGGC  200

seq1  CTACACAGCAAACGCAAAGTCAACGGGGGACCTGGCCTCTCCCTCACCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAGCAAACGCAAAGTCAACGGGGGACCTGGCCTCTCCCTCACCTC  250

seq1  CACACACGTGCATTTACCCACACATTGAAAGGGGGTGTTGGGGATCCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACGTGCATTTACCCACACATTGAAAGGGGGTGTTGGGGATCCCTG  300

seq1  AACATGGGACACATGTAAAGTATCACGGGAGGAGAACACCACGGTCCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGGACACATGTAAAGTATCACGGGAGGAGAACACCACGGTCCATA  350

seq1  CACTGGATTAGCAATGGAGCTCACTGACACGGCACACATCTGATTTTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGATTAGCAATGGAGCTCACTGACACGGCACACATCTGATTTTAGC  400

seq1  ATGCACAAACCTAAGATTAAATATTGAATTGCAATGTTGAATATTGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAAACCTAAGATTAAATATTGAATTGCAATGTTGAATATTGAATT  450

seq1  GAATTGCAATCTACAGCTCTAACTTCTCTGGAGGCCACAGAGGTCATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGCAATCTACAGCTCTAACTTCTCTGGAGGCCACAGAGGTCATTGT  500

seq1  ACTGGGAGCAGAAGAGCTGAAGCACACAGTCTCCCACTGCTATCCTCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGAGCAGAAGAGCTGAAGCACACAGTCTCCCACTGCTATCCTCAGC  550

seq1  CGTGATCTTCACAGAAAGCCAGCGACAGAAAGGGCTGGCAGAGGCTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGATCTTCACAGAAAGCCAGCGACAGAAAGGGCTGGCAGAGGCTTAAA  600

seq1  AATGGCATCTGCACCTCTCTGTAGACATCAAGGTGACAGGGTGGATGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCATCTGCACCTCTCTGTAGACATCAAGGTGACAGGGTGGATGGAG  650

seq1  CGAGAGGACACTTCTCATGGCTGGCCTATGCTGCCTCTGGCCCTAACCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAGGACACTTCTCATGGCTGGCCTATGCTGCCTCTGGCCCTAACCTC  700

seq1  AGGCAGCTGCATCCTCTCTAGGCCTCCTCCAGCCCTACCTGTCTTCCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCTGCATCCTCTCTAGGCCTCCTCCAGCCCTACCTGTCTTCCCCA  750

seq1  TCACTGCTGTTAGGAGAGGAGGAGGGAAGCTACATAAAGTCCTGCTCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGCTGTTAGGAGAGGAGGAGGGAAGCTACATAAAGTCCTGCTCAAC  800

seq1  TGCGGACACTCACCCATTAGTGTCAAGTCCAGCACCATGGCTAGCTCGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGACACTCACCCATTAGTGTCAAGTCCAGCACCATGGCTAGCTCGGT  850

seq1  GGAATACTGATTGCCTAGCATGTACAGGTCCTGGGCTCAAATCTCCAGCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACTGATTGCCTAGCATGTACAGGTCCTGGGCTCAAATCTCCAGCG  900

seq1  AAAGACTTATTACCCAGTGAATTC  924
      ||||||||||||||||||||||||
seq2  AAAGACTTATTACCCAGTGAATTC  924