BAC Information

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BAC

Clone NameB6Ng01-076H11
Chromosome15 (Build37)
Map Location 69,821,108 - 69,822,294
singlet/doubletsinglet
Overlap genenone
Upstream geneKhdrbs3
Downstream geneLOC383050
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076H11.bB6Ng01-076H11.g
ACCDH892724DH892725
length1,2371,183
definitionDH892724|Mus musculus domesticus DNA, BAC clone: B6Ng01-076H11, 5' end.DH892725|Mus musculus domesticus DNA, BAC clone: B6Ng01-076H11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgcttttaatagctgagtagtactccattgtataaatgtatc
atattttctgtatccattcctctgttgagggacatcttggttctttccag
ctctggctataataaatgaggctgctatgaacatagtggagcatgtgtcc
ttattacctgttggagcatcttctgggtatatgcccaggagtagtatagc
tgggaccttaggtagtactatgtaaaatttccctaaggaactgccaaagt
gtttaccagaatggttgtgccagcttgcaatcccatcagaaatggaggtg
tgtttctctttctccacattctcaccaacatctgctgtcactgaagttta
ttatcttagccattctgactagtgtgatgtggaatctcagggagaaagca
atctacagatttaatgtaatccccatcaaaattctgactcaattattcat
agatttagaaagaacaatttccaaattcatctggaataataaaaagccca
gaatagtgaaaactattctcagcaataaaagaacttctggccaaatcaac
atctcagacttcatgctatactacagagcaatcatgataaaaaaacaaaa
caaaacaaaacaacaataacaacaaaaacaacaacatcaacaacaacaac
accctgcatggtattggtacagtgacagacaggtagatcaactgaataga
attgaagacccagaaatgaacccacacacctatggtcacttgatcttcga
caaaggagctaaaaccatccagtggggtaaaaggcagcattttcaacaaa
tggtgctggcgcaactggcagttagttagttagaagaatgtgaattgatt
cattcttatcttcttgtacaaagctcaagtccaagtgtgtgaagaacctc
cacataaaaccagatacaatgaaactaatagtaaagaaaatggggaagac
cttgagcacatgggcacaagggaaatttttctgaacagaacgccaatggc
atgtgctgtagatcagaattgacaaatggacctcataaaatgcaaagctt
cttttaggcaaggagaaagttcatagaaccaatggcaccacgaattggga
gaagattttaacaatccttatctgacagagggctaatatccaatattaac
agaactcagagtgactctcgggaaccatacgataaattggttcagagcta
ccagaaattccaaggagaggaatggttgtaattgcct
gaattcacacccagtcactgcccatctcagggcatagtaatggggtgatg
ggcaagcaactaatcaggtgctgtcacgccacatcaggtgctgaaacgtc
acactgcgggctatataagcagcaccattttccgggttcgggtcttcctt
atgtggaagcaataaaagctttgccgtagaaggatccagttgtccaagtg
aattcttgccggcgagatactagcttgggcaagacctagccaatatcctg
cttttgggaacaggtgtgttctcccagatacaaagcgattctgcatcctc
ctcctccccatacccagcttctgtgggcataaaacctgcctgggattaat
aaaaatttgacagctgggtcaatcagtccttgtgtttcttgcctctcgtt
ctctccacaggtggttcctcagaccctgttcgacggggttggcagcaagg
gattgaaggaagacataatctggatgttcctactgcaagcaatcctcagg
gaatgctggcagcattgtggaatacaaatgtattgcaggtgacaaggctg
ctgctggtgtacctacggggacctgggaggcaagggtcttggcacagagt
cctatctggttgtttcagaatttggaaggccctcaggaatcagacagaat
tttgggctaagagatggatggacctcagggacagggaacacctcactgct
cctgggtgccttagcatgaccatgtaggccagggattggagggtaaatga
ctcacctggatatccttgatcctagcaggcataagaaaaggcaggcatag
ccatgggccaggatatggagcacagtaaacagggtgcagtaaacaggggc
ggggggggtgacacttctgtattttgttttctcacttcagttttggggaa
tgtaatggctatgaattgcctgttttatggctttgtcagctggtgtgttc
atggtaaattcctgatggaattggataactgggatgagtttgaaaaggca
atttgaaggtggttctttggtgattcctttggggaatggggtcagagtag
aaaggaagaccaaacatttcctgttatcaatatggaatgattgaataatc
agaggaatagaagatatggccctaccttcagcctatttgttgcctgaagc
ctgcagaccttggttagcataatgtcttctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_69821108_69822294
seq2: B6Ng01-076H11.g_69_1251

seq1  GAATTCACACCCAGTCACTGCCCATCTCAGGGCATAGTAATGGGGTGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACCCAGTCACTGCCCATCTCAGGGCATAGTAATGGGGTGATG  50

seq1  GGCAAGCAACTAATCAGGTGCTGTCACGCCACATCAGGTGCTGAAACGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCAACTAATCAGGTGCTGTCACGCCACATCAGGTGCTGAAACGTC  100

seq1  ACACTGCGGGCTATATAAGCAGCACCATTTTCCGGGTTCGGGTCTTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCGGGCTATATAAGCAGCACCATTTTCCGGGTTCGGGTCTTCCTT  150

seq1  ATGTGGAAGCAATAAAAGCTTTGCCGTAGAAGGATCCAGTTGTCCAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAAGCAATAAAAGCTTTGCCGTAGAAGGATCCAGTTGTCCAAGTG  200

seq1  AATTCTTGCCGGCGAGATACTAGCTTGGGCAAGACCTAGCCAATATCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTGCCGGCGAGATACTAGCTTGGGCAAGACCTAGCCAATATCCTG  250

seq1  CTTTTGGGAACAGGTGTGTTCTCCCAGATACAAAGCGATTCTGCATCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGGAACAGGTGTGTTCTCCCAGATACAAAGCGATTCTGCATCCTC  300

seq1  CTCCTCCCCATACCCAGCTTCTGTGGGCATAAAACCTGCCTGGGATTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCCATACCCAGCTTCTGTGGGCATAAAACCTGCCTGGGATTAAT  350

seq1  AAAAATTTGACAGCTGGGTCAATCAGTCCTTGTGTTTCTTGCCTCTCGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTGACAGCTGGGTCAATCAGTCCTTGTGTTTCTTGCCTCTCGTT  400

seq1  CTCTCCACAGGTGGTTCCTCAGACCCTGTTCGACGGGGTTGGCAGCAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCACAGGTGGTTCCTCAGACCCTGTTCGACGGGGTTGGCAGCAAGG  450

seq1  GATTGAAGGAAGACATAATCTGGATGTTCCTACTGCAAGCAATCCTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAAGGAAGACATAATCTGGATGTTCCTACTGCAAGCAATCCTCAGG  500

seq1  GAATGCTGGCAGCATTGTGGAATACAAATGTATTGCAGGTGACAAGGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTGGCAGCATTGTGGAATACAAATGTATTGCAGGTGACAAGGCTG  550

seq1  CTGCTGGTGTACCTACGGGGACCTGGGAGGCAAGGGTCTTGGCACAGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGTGTACCTACGGGGACCTGGGAGGCAAGGGTCTTGGCACAGAGT  600

seq1  CCTATCTGGTTGTTTCAGAATTTGGAAGGCCCTCAGGAATCAGACAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTGGTTGTTTCAGAATTTGGAAGGCCCTCAGGAATCAGACAGAAT  650

seq1  TTTGGGCTAAGAGATGGATGGACCTCAGGGACAGGGAACACCTCACTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCTAAGAGATGGATGGACCTCAGGGACAGGGAACACCTCACTGCT  700

seq1  CCTGGGTGCCTTAGCATGACCATGTAGGCCAGGGATTGGAGGGTAAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTGCCTTAGCATGACCATGTAGGCCAGGGATTGGAGGGTAAATGA  750

seq1  CTCACCTGGATATCCTTGATCCTAGCAGGCATAAGAAAAGGCAGGCATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTGGATATCCTTGATCCTAGCAGGCATAAGAAAAGGCAGGCATAG  800

seq1  CCATGGGCCAGGATATGGAGCACAGTAAACAGGGTGCAGTAAACAGGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGCCAGGATATGGAGCACAGTAAACAGGGTGCAGTAAACAGGGGC  850

seq1  GGGGGGGGTGACACTTCTGTATTTTGTTTTCTCACTTCAGTTTTGGGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGTGACACTTCTGTATTTTGTTTTCTCACTTCAGTTTTGGGGAA  900

seq1  TGTAATGGCTATGAATTGCCTGTTTTATGGCTTTGTCAGCTGGTGTGTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGGCTATGAATTGCCTGTTTTATGGCTTTGTCAGCTGGTGTGTTC  950

seq1  ATGGTAAATTCCTGATGGAATTGGAT-ACTGGGATGAGTTTGAAAAGGCA  999
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATGGTAAATTCCTGATGGAATTGGATAACTGGGATGAGTTTGAAAAGGCA  1000

seq1  ATTTTGAAGGTGG-TCTTT-GTGATTCC-TTGGGGAATGGGGTCAGAGTA  1046
      | ||||||||||| ||||| |||||||| |||||||||||||||||||||
seq2  A-TTTGAAGGTGGTTCTTTGGTGATTCCTTTGGGGAATGGGGTCAGAGTA  1049

seq1  GAAAGGAAGACCAAAACCATTTTCCTGTTATCAAAATTGGAATGATTGAA  1096
      |||||||||||||||  || |||||||||||||| | |||||||||||||
seq2  GAAAGGAAGACCAAA--CA-TTTCCTGTTATCAATA-TGGAATGATTGAA  1095

seq1  T-ATCAGGAGGAGTAGAAG-TATGGGCCTACCTTCAGCCTATTTGTTGCC  1144
      | |||| ||||| |||||| ||||| |||||||||||||||||||||| |
seq2  TAATCA-GAGGAATAGAAGATATGGCCCTACCTTCAGCCTATTTGTTG-C  1143

seq1  CTGAAAGCTGCAGCTCTTGGGTTAGCATTGATTGTCTTCTGGA  1187
      |||||  ||||||  ||| |||||||||  | |||||||||||
seq2  CTGAAGCCTGCAGACCTT-GGTTAGCAT--AATGTCTTCTGGA  1183