BAC Information

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BAC

Clone NameB6Ng01-076N13
Chromosome15 (Build37)
Map Location 23,118,491 - 23,258,610
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545091, Cdh18
Downstream geneLOC624863, LOC666989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076N13.bB6Ng01-076N13.g
ACCDH892992DH892993
length1,172988
definitionDH892992|Mus musculus domesticus DNA, BAC clone: B6Ng01-076N13, 5' end.DH892993|Mus musculus domesticus DNA, BAC clone: B6Ng01-076N13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,118,491 - 23,119,656)(23,258,006 - 23,258,610)
sequence
gaattcaggtactgtaaattttagccaaatcaaaaaatagtctcagattt
aaaaccatttttagtattcatggtaaaagtgccatttttgtctttatcag
cttttcctgttattttaatggtcatattttaccttaaggttttctttgaa
aaaaattcttaagttcactttctatgtagaaatagtagaattattttact
aagattcaattgtttcataatgatatggagatgaaaatgtaagctattgc
aaaaataacattgtaccaaaataatgttgagaaagcatatgaacatattt
taattacacacctgggatgtgaaggaaggaggtttgtagttcagttcaag
gcccttgccatctatatattgaatttagtaagtctgggcttcattcaata
ttgtctcaaactgctgggagcataaagatcctggcacccaaaatccccag
ggaaacaagtaaggaggccatgaatacctgttttccactcagaaggtttg
gaatgggtgttgttaataccctggttaatattgtaatctttacatccagt
ccatctaaatccctcagaatgtttatcccagactctctctttgtagacat
ttattttcagctttgtttctcagtcaacagaacccattcttaggggagat
gacacatgtactttatagcctgttgatagctatgttatcttggtcaaaga
ccacaccagattcaaggtccttaagctatagacttcttcaagatggtata
tatttttgaatcgatgtaatgccttcctttgcactgagaattttattgtg
ccaggaaacttttatccaaaaattgtgctgattttaaagttgcttacaat
aaactgcccggtgtcagactctctagaagtttgaaccatcaccaagtcat
ggggaactgaattttctagtttccttctttgtctcttgtgttatgttttc
ctgccagttgtgatgcttgcagtcactccccccgccccccatttcaaatt
aaaaacacataagtaaatgcttatttagccagtgatccatatctttccct
gaatgtctaatcaaacttttaaccaatttatttttttttgtttaaaggca
gtctcatgcagaactgttctttacccctcctatatgttgagtaaggccac
tcaagtcctagattctactgcc
gaattcattgcagactaaggcacctccttcaactgcagggctcattagag
attgtttttcttgttatgttttgttttgctttgttttgttttcatattaa
taatttctatttatttatttatttatttatttatttatttaaaatcccag
attttattcagttcctggcccatcctcagactgttccacaacccatacct
cctccctgccccctgtcttgttttgttttttaaaagggagaagaagtagt
taattctgaagccaaatataagtgatcatgactcagaaacatatttagtt
caccctgaattctgtgttgcaatgtggaagcagattcataatttttgtat
agaaacagaacaaaggtagtcataaatcaaatacttctctaaatattggg
gaaatattaagtaggtaggttaaaggaaagtttatttcgggtaaaataaa
ctccctgatgacaatcttacttttttacttgatgcaaaccatggcttgct
tttgattattgtatttcaaaagattttattaattagtctcaggattttgg
gttagaataacagataagcaagcagtggttattcagagggctaaacatag
cccatgataaattatatttatggttcagacttgcaacattcatacctctc
catactcactgaagttataaccatccaataaaccttacagaacctttcac
agaagatgcagcattttcctcccagggaactgccgtttttcattcatatg
aaactattaaacaggatctcaattagaacaggcagatttgaccttgcctt
gaagatgttcaaactttgatctcctagagacagaggagatcttagcattg
acctagcatggctgctctaatggtggggatttgactcttgtttacattgc
aagggtgtgcacttagatcctgtaataccaaagataactcatttgggttc
tgtgtagtcatacaactgtgactgtctcacaagattgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23118491_23119656
seq2: B6Ng01-076N13.b_47_1218

seq1  GAATTCAGGTACTGTAAATTTTAGCCAAATCAAAAAATAGTCTCAGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTACTGTAAATTTTAGCCAAATCAAAAAATAGTCTCAGATTT  50

seq1  AAAACCATTTTTAGTATTCATGGTAAAAGTGCCATTTTTGTCTTTATCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCATTTTTAGTATTCATGGTAAAAGTGCCATTTTTGTCTTTATCAG  100

seq1  CTTTTCCTGTTATTTTAATGGTCATATTTTACCTTAAGGTTTTCTTTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCTGTTATTTTAATGGTCATATTTTACCTTAAGGTTTTCTTTGAA  150

seq1  AAAAATTCTTAAGTTCACTTTCTATGTAGAAATAGTAGAATTATTTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCTTAAGTTCACTTTCTATGTAGAAATAGTAGAATTATTTTACT  200

seq1  AAGATTCAATTGTTTCATAATGATATGGAGATGAAAATGTAAGCTATTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCAATTGTTTCATAATGATATGGAGATGAAAATGTAAGCTATTGC  250

seq1  AAAAATAACATTGTACCAAAATAATGTTGAGAAAGCATATGAACATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAACATTGTACCAAAATAATGTTGAGAAAGCATATGAACATATTT  300

seq1  TAATTACACACCTGGGATGTGAAGGAAGGAGGTTTGTAGTTCAGTTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACACACCTGGGATGTGAAGGAAGGAGGTTTGTAGTTCAGTTCAAG  350

seq1  GCCCTTGCCATCTATATATTGAATTTAGTAAGTCTGGGCTTCATTCAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTGCCATCTATATATTGAATTTAGTAAGTCTGGGCTTCATTCAATA  400

seq1  TTGTCTCAAACTGCTGGGAGCATAAAGATCCTGGCACCCAAAATCCCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCAAACTGCTGGGAGCATAAAGATCCTGGCACCCAAAATCCCCAG  450

seq1  GGAAACAAGTAAGGAGGCCATGAATACCTGTTTTCCACTCAGAAGGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAAGTAAGGAGGCCATGAATACCTGTTTTCCACTCAGAAGGTTTG  500

seq1  GAATGGGTGTTGTTAATACCCTGGTTAATATTGTAATCTTTACATCCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGTGTTGTTAATACCCTGGTTAATATTGTAATCTTTACATCCAGT  550

seq1  CCATCTAAATCCCTCAGAATGTTTATCCCAGACTCTCTCTTTGTAGACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTAAATCCCTCAGAATGTTTATCCCAGACTCTCTCTTTGTAGACAT  600

seq1  TTATTTTCAGCTTTGTTTCTCAGTCAACAGAACCCATTCTTAGGGGAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCAGCTTTGTTTCTCAGTCAACAGAACCCATTCTTAGGGGAGAT  650

seq1  GACACATGTACTTTATAGCCTGTTGATAGCTATGTTATCTTGGTCAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATGTACTTTATAGCCTGTTGATAGCTATGTTATCTTGGTCAAAGA  700

seq1  CCACACCAGATTCAAGGTCCTTAAGCTATAGACTTCTTCAAGATGGTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCAGATTCAAGGTCCTTAAGCTATAGACTTCTTCAAGATGGTATA  750

seq1  TATTTTTGAATCGATGTAATGCCTTCCTTTGCACTGAGAATTTTATTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGAATCGATGTAATGCCTTCCTTTGCACTGAGAATTTTATTGTG  800

seq1  CCAGGAAACTTTTATCCAAAAATTGTGCTGATTTTAAAGTTGCTTACAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAACTTTTATCCAAAAATTGTGCTGATTTTAAAGTTGCTTACAAT  850

seq1  AAACTGCCCGGTGTCAGACTCTCTAGAAGTTTGAACCATCACCAAGTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCCCGGTGTCAGACTCTCTAGAAGTTTGAACCATCACCAAGTCAT  900

seq1  GGGGAACTGAATTTTCTAGTTTCCTTCTTTGTCTCTTGTGTTATGTTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACTGAATTTTCTAGTTTCCTTCTTTGTCTCTTGTGTTATGTTTTC  950

seq1  CTGCCAGTTGTGATGCTTGCAGTCACTCCCCCCGCCCCCCATATCAAA-T  999
      |||||||||||||||||||||||||||||||||||||||||| ||||| |
seq2  CTGCCAGTTGTGATGCTTGCAGTCACTCCCCCCGCCCCCCATTTCAAATT  1000

seq1  AAAAACACAATAAGTAAATGCTTATTTAGCCAGTGAT-CATATC-TTCCC  1047
      |||||||| |||||||||||||||||||||||||||| |||||| |||||
seq2  AAAAACAC-ATAAGTAAATGCTTATTTAGCCAGTGATCCATATCTTTCCC  1049

seq1  TGAATGTCTAATCAAACTTTTAACCAATTTTATATTTTTTGTTT-AAGGC  1096
      ||||||||||||||||||||||||||||||  | |||||||||| |||||
seq2  TGAATGTCTAATCAAACTTTTAACCAATTTATTTTTTTTTGTTTAAAGGC  1099

seq1  AGTCTCATGCAG-ACTG-TCTTCACGCTTCCTATTATGTTGAGTAAGGCC  1144
      |||||||||||| |||| |||| || | ||||| ||||||||||||||||
seq2  AGTCTCATGCAGAACTGTTCTTTACCCCTCCTA-TATGTTGAGTAAGGCC  1148

seq1  A-TCAAGTCTTAGA-TCTACTGCC  1166
      | ||||||| |||| |||||||||
seq2  ACTCAAGTCCTAGATTCTACTGCC  1172

seq1: chr15_23258006_23258610
seq2: B6Ng01-076N13.g_68_672 (reverse)

seq1  ATGGGCTATGTTTAGCCCTCTGAATAACCACTGCTTGCTTATCTGTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTATGTTTAGCCCTCTGAATAACCACTGCTTGCTTATCTGTTATT  50

seq1  CTAACCCAAAATCCTGAGACTAATTAATAAAATCTTTTGAAATACAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCCAAAATCCTGAGACTAATTAATAAAATCTTTTGAAATACAATAA  100

seq1  TCAAAAGCAAGCCATGGTTTGCATCAAGTAAAAAAGTAAGATTGTCATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGCAAGCCATGGTTTGCATCAAGTAAAAAAGTAAGATTGTCATCA  150

seq1  GGGAGTTTATTTTACCCGAAATAAACTTTCCTTTAACCTACCTACTTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTTATTTTACCCGAAATAAACTTTCCTTTAACCTACCTACTTAAT  200

seq1  ATTTCCCCAATATTTAGAGAAGTATTTGATTTATGACTACCTTTGTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCCAATATTTAGAGAAGTATTTGATTTATGACTACCTTTGTTCTG  250

seq1  TTTCTATACAAAAATTATGAATCTGCTTCCACATTGCAACACAGAATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATACAAAAATTATGAATCTGCTTCCACATTGCAACACAGAATTCA  300

seq1  GGGTGAACTAAATATGTTTCTGAGTCATGATCACTTATATTTGGCTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAACTAAATATGTTTCTGAGTCATGATCACTTATATTTGGCTTCAG  350

seq1  AATTAACTACTTCTTCTCCCTTTTAAAAAACAAAACAAGACAGGGGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACTACTTCTTCTCCCTTTTAAAAAACAAAACAAGACAGGGGGCAG  400

seq1  GGAGGAGGTATGGGTTGTGGAACAGTCTGAGGATGGGCCAGGAACTGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGTATGGGTTGTGGAACAGTCTGAGGATGGGCCAGGAACTGAAT  450

seq1  AAAATCTGGGATTTTAAATAAATAAATAAATAAATAAATAAATAAATAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTGGGATTTTAAATAAATAAATAAATAAATAAATAAATAAATAGA  500

seq1  AATTATTAATATGAAAACAAAACAAAGCAAAACAAAACATAACAAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTAATATGAAAACAAAACAAAGCAAAACAAAACATAACAAGAAAA  550

seq1  ACAATCTCTAATGAGCCCTGCAGTTGAAGGAGGTGCCTTAGTCAGCAATG  600
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACAATCTCTAATGAGCCCTGCAGTTGAAGGAGGTGCCTTAGTCTGCAATG  600

seq1  AATTC  605
      |||||
seq2  AATTC  605