BAC Information

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BAC

Clone NameB6Ng01-077B24
Chromosome15 (Build37)
Map Location 25,834,760 - 26,003,961
singlet/doubletdoublet
Overlap gene1810015C04Rik, Zfp622
Upstream geneLOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1
Downstream geneAK162044, Fbxl7, LOC622531, LOC625311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077B24.bB6Ng01-077B24.g
ACCDH893183DH893184
length1,1031,054
definitionDH893183|Mus musculus domesticus DNA, BAC clone: B6Ng01-077B24, 5' end.DH893184|Mus musculus domesticus DNA, BAC clone: B6Ng01-077B24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,834,760 - 25,835,868)(26,002,890 - 26,003,961)
sequence
gaattcactgtgttcagtatataacaagtactaagtaattgggaggagtt
ttaaatttttaaaatgtatttttgattttatgtgtataagcgtttaccag
ggcgtgtgtatgtgcagcacatgcatgcagtgcccccagggagccagagc
tgccatcagaccccccgggaactggaattagagatggttgcgagctgcgg
tgtggtgctgcgaactgaacccttgccctttggaaggacagaaggtgccc
ccagccgttagcctctaagccatcactccagccctcaagaaagttttagg
tggaatcaacacgtatgtttttaaatggaatgtttcatctgagatggatt
tggaataaaaagaagatagcctcgggtccttccttacaagcggagagaga
acagattggcgttttccttgttgtaataacacagtggagcaaagtggagg
aggattccttttggcttacaatgcggagggtttagagcatggatgcttga
ctttgctgtgtctgctcccttgcctggcgagctgggacatcctcagtggg
gaaggctcatctcagatgcctttctctgacatattcccccaaggacctgc
tagttacctgcttgtctatgtccttattcatgcagtgatgtacagatacg
gttggtgccttcacagctctctctcaatagcaccaccagacgggaccaag
ccttccacatgggatcattttatggggaacatttcacatctgagccacag
aatttacatatgagctatttgcaggtgataaaatcataccttttttattc
cccaagtggaaaggctgtactggtgctggagtcaagaatttgtgttgtct
gtttaggaaccatgggctctagaaactgaatataatatgtttgtctttgg
tccctctgtcaaggcaggagagctttctgaaagtgaaagaagacgtggct
ggccatggataagctgcatagaattgatcagaatgtggggggtcaatatg
tgaccatcagcagagagcagtcataattctagaggaggcttgctccctga
ttgctgccatgaatttgggaatagagaaagctaattctctgtagcaagtg
att
gaattctctgatctccatctactgctgccaggagaccctcccatgaaaga
tgctctcatcccatacccagacgaagactggatccttatctctgaagaca
cagagaagactctgcataaagcatcctgaaagtttagtagcattagaatt
cattccaacgatcaacagtacctttccaacattatccagtacttcttcag
ccttagcataaaaatatatagttttgtctatttatttggatttccattgc
cctgtgaaggttgcagtgttacatttaacattaaatcagtgtgtttgctc
ttctcttgttaatgtgcttctgacatataggtcctccagtgtgagtcttt
cagagagagacagatactagtgttctcctgtgtagcctccaactgcatgt
acagtcactgaattcctcactagcacaaactaataaaattctaaaataaa
aatcggctacttttccttgagaatgtccttaatgaaactgtaaaaaatta
attttattaaatctcatttactgcgtacacatccttttaatattcaatgc
aacaaaatgtgaaggctgcataaattaattttgcagtgtgctgaagtatg
aaggttgtcttgagggcaagcacggtgcagttctttgaattaaatgctga
aataaaaatgggcacaagagtaaacatgtataatcccagcagctgggaca
ctgaggcagaaggaccattggcctaaacccagcttggtctacaccatgaa
atcctgtgtcaagaaagcaaaacagtaatcaagaaggaaaacttcttctt
ccctctccccttcttcctctcctcctccttcttttcatttatgaatatca
ttttaaagaactattgaattattcaatcttagatgtttgggaatattttt
ccaaatatgaatgagaattatcagttcagggagactgacaggattgtttc
ctctataacatccattcttgcagaaaattagattgaaagatgttcccact
gtccacattcatagacttttttaagaatggggttttcttttacttgtgtg
atga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25834760_25835868
seq2: B6Ng01-077B24.b_46_1148

seq1  GAATTCACTGTGTTCAGTATATAACAAGTACTAAGTAATTGGGAGGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGTTCAGTATATAACAAGTACTAAGTAATTGGGAGGAGTT  50

seq1  TTAAATTTTTAAAATGTATTTTTGATTTTATGTGTATAAGCGTTTACCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTTAAAATGTATTTTTGATTTTATGTGTATAAGCGTTTACCAG  100

seq1  GGCGTGTGTATGTGCAGCACATGCATGCAGTGCCCCCAGGGAGCCAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGTGTATGTGCAGCACATGCATGCAGTGCCCCCAGGGAGCCAGAGC  150

seq1  TGCCATCAGACCCCCCGGGAACTGGAATTAGAGATGGTTGCGAGCTGCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCAGACCCCCCGGGAACTGGAATTAGAGATGGTTGCGAGCTGCGG  200

seq1  TGTGGTGCTGCGAACTGAACCCTTGCCCTTTGGAAGGACAGAAGGTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGCTGCGAACTGAACCCTTGCCCTTTGGAAGGACAGAAGGTGCCC  250

seq1  CCAGCCGTTAGCCTCTAAGCCATCACTCCAGCCCTCAAGAAAGTTTTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCGTTAGCCTCTAAGCCATCACTCCAGCCCTCAAGAAAGTTTTAGG  300

seq1  TGGAATCAACACGTATGTTTTTAAATGGAATGTTTCATCTGAGATGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCAACACGTATGTTTTTAAATGGAATGTTTCATCTGAGATGGATT  350

seq1  TGGAATAAAAAGAAGATAGCCTCGGGTCCTTCCTTACAAGCGGAGAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAAAAAGAAGATAGCCTCGGGTCCTTCCTTACAAGCGGAGAGAGA  400

seq1  ACAGATTGGCGTTTTCCTTGTTGTAATAACACAGTGGAGCAAAGTGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTGGCGTTTTCCTTGTTGTAATAACACAGTGGAGCAAAGTGGAGG  450

seq1  AGGATTCCTTTTGGCTTACAATGCGGAGGGTTTAGAGCATGGATGCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCCTTTTGGCTTACAATGCGGAGGGTTTAGAGCATGGATGCTTGA  500

seq1  CTTTGCTGTGTCTGCTCCCTTGCCTGGCGAGCTGGGACATCCTCAGTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTGTGTCTGCTCCCTTGCCTGGCGAGCTGGGACATCCTCAGTGGG  550

seq1  GAAGGCTCATCTCAGATGCCTTTCTCTGACATATTCCCCCAAGGACCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTCATCTCAGATGCCTTTCTCTGACATATTCCCCCAAGGACCTGC  600

seq1  TAGTTACCTGCTTGTCTATGTCCTTATTCATGCAGTGATGTACAGATACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACCTGCTTGTCTATGTCCTTATTCATGCAGTGATGTACAGATACG  650

seq1  GTTGGTGCCTTCACAGCTCTCTCTCAATAGCACCACCAGACGGGACCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGCCTTCACAGCTCTCTCTCAATAGCACCACCAGACGGGACCAAG  700

seq1  CCTTCCACATGGGATCATTTTATGGGGAACATTTCACATCTGAGCCACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCACATGGGATCATTTTATGGGGAACATTTCACATCTGAGCCACAG  750

seq1  AATTTACATATGAGCTATTTGCAGGTGATAAAATCATACCTTTTTTATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACATATGAGCTATTTGCAGGTGATAAAATCATACCTTTTTTATTC  800

seq1  CCCAAGTGG-AAGGCTGTACTGGTGCTGGAGTCAAGAATTTGTGTTGTCT  849
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTGGAAAGGCTGTACTGGTGCTGGAGTCAAGAATTTGTGTTGTCT  850

seq1  GTTTAGGAACCATGGGCTCTAGAAACTGAATATAATATGTTTGTCTTTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGGAACCATGGGCTCTAGAAACTGAATATAATATGTTTGTCTTTGG  900

seq1  TCCCTCTGTCAAGGCAGGAGAGCTTTCTGAAAGTGAAAGAAGACGTGGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTGTCAAGGCAGGAGAGCTTTCTGAAAGTGAAAGAAGACGTGGCT  950

seq1  GGCCATGGATAAGCTGCATAAGAATTGATCAGAATGT-GGGGGTC-ATAT  997
      ||||||||||||||||||| ||||||||||||||||| ||||||| ||||
seq2  GGCCATGGATAAGCTGCAT-AGAATTGATCAGAATGTGGGGGGTCAATAT  999

seq1  GTGACCATCAGCAGAGAGGCAGTCATAAATTCTAGAGGAGGCCTTGCCCC  1047
      ||||||||||||||||| |||||||| |||||||||||||| ||||| ||
seq2  GTGACCATCAGCAGAGA-GCAGTCAT-AATTCTAGAGGAGG-CTTGCTCC  1046

seq1  CTGATTGCTGCCAATGGATTTGGGGAATAGGAGAAAAGCT-ATTCTCTGG  1096
      |||||||||||| ||| |||| ||||||| ||| |||||| |||||||| 
seq2  CTGATTGCTGCC-ATGAATTT-GGGAATA-GAG-AAAGCTAATTCTCTG-  1091

seq1  TAAGCAAGTGATT  1109
        |||||||||||
seq2  -TAGCAAGTGATT  1103

seq1: chr15_26002890_26003961
seq2: B6Ng01-077B24.g_66_1119 (reverse)

seq1  TCATCACACAAAGTAAAAAGAAAACCCCCATTTCTTTAGAAAAGTCTATG  50
      ||||||||| |||| ||||||||| |||||||   ||| |||||||||||
seq2  TCATCACAC-AAGT-AAAAGAAAA-CCCCATT--CTTAAAAAAGTCTATG  45

seq1  AATGTTGGGACAGTGGGAACATCTTTTCAATTCTAATTTTTCCTTGCAAG  100
      |||||  |||||||||||||||| |||||| |||||||||    ||||||
seq2  AATGT--GGACAGTGGGAACATC-TTTCAA-TCTAATTTT---CTGCAAG  88

seq1  -ATGGATTGTTATTAGAGGAAACAATTCCTGTCAGTCTCCCTTGAACTGA  149
       ||||| ||||| |||||||||||| ||||||||||||||| ||||||||
seq2  AATGGA-TGTTA-TAGAGGAAACAA-TCCTGTCAGTCTCCC-TGAACTGA  134

seq1  TAATTCTCATTCATATTTTGGAAAAATATTTCCCAAACATCTAAGATTGA  199
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  TAATTCTCATTCATA-TTTGGAAAAATA-TTCCCAAACATCTAAGATTGA  182

seq1  ATAATTCAATAGTTCTTTTAAAATGATATTCATAAATGAAAAGAAGGAGG  249
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATAATTCAATAGTTC-TTTAAAATGATATTCATAAATGAAAAGAAGGAGG  231

seq1  AGGAGAGGAAGAAGGGGAGAGGGAAGAAGAAGTTTTCCTTCTTGATTACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGAAGAAGGGGAGAGGGAAGAAGAAGTTTTCCTTCTTGATTACT  281

seq1  GTTTTGCTTTCTTGACACAGGATTTCATGGTGTAGACCAAGCTGGGTTTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCTTTCTTGACACAGGATTTCATGGTGTAGACCAAGCTGGGTTTA  331

seq1  GGCCAATGGTCCTTCTGCCTCAGTGTCCCAGCTGCTGGGATTATACATGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATGGTCCTTCTGCCTCAGTGTCCCAGCTGCTGGGATTATACATGT  381

seq1  TTACTCTTGTGCCCATTTTTATTTCAGCATTTAATTCAAAGAACTGCACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTTGTGCCCATTTTTATTTCAGCATTTAATTCAAAGAACTGCACC  431

seq1  GTGCTTGCCCTCAAGACAACCTTCATACTTCAGCACACTGCAAAATTAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGCCCTCAAGACAACCTTCATACTTCAGCACACTGCAAAATTAAT  481

seq1  TTATGCAGCCTTCACATTTTGTTGCATTGAATATTAAAAGGATGTGTACG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCAGCCTTCACATTTTGTTGCATTGAATATTAAAAGGATGTGTACG  531

seq1  CAGTAAATGAGATTTAATAAAATTAATTTTTTACAGTTTCATTAAGGACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATGAGATTTAATAAAATTAATTTTTTACAGTTTCATTAAGGACA  581

seq1  TTCTCAAGGAAAAGTAGCCGATTTTTATTTTAGAATTTTATTAGTTTGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAGGAAAAGTAGCCGATTTTTATTTTAGAATTTTATTAGTTTGTG  631

seq1  CTAGTGAGGAATTCAGTGACTGTACATGCAGTTGGAGGCTACACAGGAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGAGGAATTCAGTGACTGTACATGCAGTTGGAGGCTACACAGGAGA  681

seq1  ACACTAGTATCTGTCTCTCTCTGAAAGACTCACACTGGAGGACCTATATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGTATCTGTCTCTCTCTGAAAGACTCACACTGGAGGACCTATATG  731

seq1  TCAGAAGCACATTAACAAGAGAAGAGCAAACACACTGATTTAATGTTAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGCACATTAACAAGAGAAGAGCAAACACACTGATTTAATGTTAAA  781

seq1  TGTAACACTGCAACCTTCACAGGGCAATGGAAATCCAAATAAATAGACAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACACTGCAACCTTCACAGGGCAATGGAAATCCAAATAAATAGACAA  831

seq1  AACTATATATTTTTATGCTAAGGCTGAAGAAGTACTGGATAATGTTGGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATATATTTTTATGCTAAGGCTGAAGAAGTACTGGATAATGTTGGAA  881

seq1  AGGTACTGTTGATCGTTGGAATGAATTCTAATGCTACTAAACTTTCAGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTGTTGATCGTTGGAATGAATTCTAATGCTACTAAACTTTCAGGA  931

seq1  TGCTTTATGCAGAGTCTTCTCTGTGTCTTCAGAGATAAGGATCCAGTCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTATGCAGAGTCTTCTCTGTGTCTTCAGAGATAAGGATCCAGTCTT  981

seq1  CGTCTGGGTATGGGATGAGAGCATCTTTCATGGGAGGGTCTCCTGGCAGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTGGGTATGGGATGAGAGCATCTTTCATGGGAGGGTCTCCTGGCAGC  1031

seq1  AGTAGATGGAGATCAGAGAATTC  1072
      |||||||||||||||||||||||
seq2  AGTAGATGGAGATCAGAGAATTC  1054