BAC Information

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BAC

Clone NameB6Ng01-078I19
Chromosome15 (Build37)
Map Location 14,701,920 - 14,703,045
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666708, LOC674819
Downstream geneLOC100040024, LOC100040033, LOC100040046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078I19.bB6Ng01-078I19.g
ACCDH894215DH894216
length1,1421,113
definitionDH894215|Mus musculus domesticus DNA, BAC clone: B6Ng01-078I19, 5' end.DH894216|Mus musculus domesticus DNA, BAC clone: B6Ng01-078I19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctctcttggtgaaagttgtgttcaaagtgctgtggaacagcac
tctgggttagatgttgactagaaggatcccatcctggacgctccactgtt
cctgtgccctgtgtccttgctggtcctgccctgaacagttattgtcgaga
aagtggctatctcacctctgagccagggagtgagaacactcttgggaaaa
cagctctttcctggcaggacctgtgcacagagggctgtggaacagcctca
gctcctgagtgcaaatgttgaccagaggatatgatttaaaaaaaaatata
tattagccttttacttgggtcttttttctgttttctatcctgattattct
taaaattggtcttttcacaatttctcatattttcttgatgttttatgaac
ggaggattttagatgtaacatttctttgaccaaagacccatttttccccc
ttatggtgccttcttgcctgagagtatgccttttatctcttgtattctgt
tgggaaaagtttcctgtttggttcctgtttaagtttctacatttttcatt
tccagatttttatcagtttgggatttctttattgatttaatttccacttt
cagttaatgaattgctttattcattttaatgaaatgtttcttatctcaga
tttctttaagagctttttttcttataagggcatttactttattcataaag
gtgtttattaattcatagtatggttcttgtattttcttcagccatgtttt
tttttttttgggggggggctataatagtagggctgctgggatccagttaa
tataatgtctaatgtctcattgattatgattttatgctgatatatagaca
tctgcatttgggattattgaaattctaggtggtatcatcagtcctgtctt
tttagataggaattttgttctttgattcaacttcacactttgtttattta
gaggttgtttttctatttataagaagtcagaaaatttttgtggaatcctg
aaaattgtggccaccaagtgttcctggtagaaatgtgttttctgatatta
cgaaccgaacacttaagaatgagaatcggctggaacgttggagtgggagt
ccagtgatctcaaaaagaaatgtcctacggtttcatacagat
gaattctcatctgagaaataccaaatggctgagaagcacctaaaaaattg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaagcctgggat
tccacctcataccagtcagaacagctaagatcaaaaactcaggtgaaagc
agatactggtgagaatgtggagaaagaggaacactcctccattgctgtta
ggattgaaagctgttacaaccattctggaaatcagtttggcggttcctca
gaaaattgggcataatactactggacaggaattcttgatcagtaatcaaa
ccaagctagataccaggggttgaagggaacaataaagaccctaaaggaga
accaacttctgccatttttctaagccatgataatctgaagtattattgaa
attgaaaggtatatttatatgcttatgcatagagaattatagttctcaca
ccataagaactgttcttgtaattttgatctgttctatcatgtatgataaa
agccctttgtccaaatcttcttttaatgtaggactctctggctgcaattt
atgatttcaaaaattatatcttgttaaacttttaatattgtctcttaatt
ttgactcataggaaaataatgaagctactgaccatcttctcccttttagt
aagaaaaaacaaatatttctcatcacaacatatatagcagaactcactag
caaacctgggaacccagtgtctctgatttcaaccgttttctcctttgtaa
aagtatttcatttttatctacttgcgatatgcctgtcttcttttgagttg
gtaggctgtagtggtctggcggtgtagagtcaagagaggatacttggtta
taattcatcatcaattaagttttcaaccagttcacctggttttacggtca
tttttcttcacctttcaaaatttactgcaaccaatactatggcttgtaga
gctgtatggtggcccactaactccatcttgactgttccactgatgactta
gattcttgtcttgtcaaccacgtgatgtttacagtataaattttcctctg
tagttctagcacactatgtttacattggtggtgcaacattgcattctttc
tgtcatgctgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_14701920_14703045
seq2: B6Ng01-078I19.g_70_1182

seq1  GAATTCTCATCTGAGAAATACCAAATGGCTGAGAAGCACCTAAAAAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCTGAGAAATACCAAATGGCTGAGAAGCACCTAAAAAATTG  50

seq1  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAAGCCTGGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAAGCCTGGGAT  100

seq1  TCCACCTCATACCAGTCAGAACAGCTAAGATCAAAAACTCAGGTGAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCATACCAGTCAGAACAGCTAAGATCAAAAACTCAGGTGAAAGC  150

seq1  AGATACTGGTGAGAATGTGGAGAAAGAGGAACACTCCTCCATTGCTGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTGGTGAGAATGTGGAGAAAGAGGAACACTCCTCCATTGCTGTTA  200

seq1  GGATTGAAAGCTGTTACAACCATTCTGGAAATCAGTTTGGCGGTTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGAAAGCTGTTACAACCATTCTGGAAATCAGTTTGGCGGTTCCTCA  250

seq1  GAAAATTGGGCATAATACTACTGGACAGGAATTCTTGATCAGTAATCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGGGCATAATACTACTGGACAGGAATTCTTGATCAGTAATCAAA  300

seq1  CCAAGCTAGATACCAGGGGTTGAAGGGAACAATAAAGACCCTAAAGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTAGATACCAGGGGTTGAAGGGAACAATAAAGACCCTAAAGGAGA  350

seq1  ACCAACTTCTGCCATTTTTCTAAGCCATGATAATCTGAAGTATTATTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTTCTGCCATTTTTCTAAGCCATGATAATCTGAAGTATTATTGAA  400

seq1  ATTGAAAGGTATATTTATATGCTTATGCATAGAGAATTATAGTTCTCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGGTATATTTATATGCTTATGCATAGAGAATTATAGTTCTCACA  450

seq1  CCATAAGAACTGTTCTTGTAATTTTGATCTGTTCTATCATGTATGATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAGAACTGTTCTTGTAATTTTGATCTGTTCTATCATGTATGATAAA  500

seq1  AGCCCTTTGTCCAAATCTTCTTTTAATGTAGGACTCTCTGGCTGCAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTTGTCCAAATCTTCTTTTAATGTAGGACTCTCTGGCTGCAATTT  550

seq1  ATGATTTCAAAAATTATATCTTGTTAAACTTTTAATATTGTCTCTTAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTCAAAAATTATATCTTGTTAAACTTTTAATATTGTCTCTTAATT  600

seq1  TTGACTCATAGGAAAATAATGAAGCTACTGACCATCTTCTCCCTTTTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCATAGGAAAATAATGAAGCTACTGACCATCTTCTCCCTTTTAGT  650

seq1  AAGAAAAAACAAATATTTCTCATCACAACATATATAGCAGAACTCACTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAACAAATATTTCTCATCACAACATATATAGCAGAACTCACTAG  700

seq1  CAAACCTGGGAACCCAGTGTCTCTGATTTCAACCGTTTTCTCCTTTGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCTGGGAACCCAGTGTCTCTGATTTCAACCGTTTTCTCCTTTGTAA  750

seq1  AAGTATTTCATTTTTATCTACTTGCGATATGCCTGTCTTCTTTTGAGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTCATTTTTATCTACTTGCGATATGCCTGTCTTCTTTTGAGTTG  800

seq1  GTAGGCTGTAGTGGTCTGGCGGTGTAGAGTCAAGAGAGGATACTTGGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCTGTAGTGGTCTGGCGGTGTAGAGTCAAGAGAGGATACTTGGTTA  850

seq1  TAATTCATCATCAATTAAGTTTTCAACCAGTTCACCTGGTTTTACGGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCATCATCAATTAAGTTTTCAACCAGTTCACCTGGTTTTACGGTCA  900

seq1  TTTTTCTTCACCTTTCAAAATTTACTGCAACCAATTACTATGGCTTGTAG  950
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  TTTTTCTTCACCTTTCAAAATTTACTGCAACCAA-TACTATGGCTTGTA-  948

seq1  GAGCTGTATGGTGGCCCACTAACTCCCATCTTGACTGTTCCAACTGATGA  1000
      |||||||||||||||||||||||| |||||||||||||||| ||||||||
seq2  GAGCTGTATGGTGGCCCACTAACT-CCATCTTGACTGTTCC-ACTGATGA  996

seq1  CTTAAGATTC-TGTCTTGTCAACCACGTGATGTTTAACAAGTATAAAATT  1049
      ||| |||||| |||||||||||||||||||||||||   |||||||| ||
seq2  CTT-AGATTCTTGTCTTGTCAACCACGTGATGTTTA--CAGTATAAATTT  1043

seq1  TTCTCTGTAGTTCTAAGCACACTTATGTTTTACATTG--TGTGCAAACAT  1097
      | |||||||||||| ||||||| |||| |||||||||   |||| |||| 
seq2  TCCTCTGTAGTTCT-AGCACAC-TATG-TTTACATTGGTGGTGC-AACA-  1088

seq1  GTGGCATTTCTTTTTCTGTCATGCTGGGG  1126
       | ||||   | |||||||||||||||||
seq2  -TTGCAT---TCTTTCTGTCATGCTGGGG  1113