BAC Information

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BAC

Clone NameB6Ng01-079F03
Chromosome15 (Build37)
Map Location 54,686,868 - 54,845,706
singlet/doubletdoublet
Overlap geneEnpp2, LOC100039911, LOC100039822
Upstream geneSamd12, EG665097, EG621631, Tnfrsf11b, LOC665280, EG383032, Colec10, Mal2, Nov, LOC665302, LOC100039816
Downstream geneTaf2, 2600005O03Rik, Depdc6, Col14a1, Mrpl13, Mtbp, Sntb1, LOC665348, LOC100039908
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079F03.bB6Ng01-079F03.g
ACCDH894762DH894763
length1,1911,072
definitionDH894762|Mus musculus domesticus DNA, BAC clone: B6Ng01-079F03, 5' end.DH894763|Mus musculus domesticus DNA, BAC clone: B6Ng01-079F03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(54,686,868 - 54,688,061)(54,844,599 - 54,845,706)
sequence
gaattctacatgtggcctgactaacagaattttgagacagagtggactca
tccggatcacctctactttactgatgaagtaaagctgcatgtgtggccca
tcccaaatctaggccccaagtgcagaattcgcctccctagtctttggggt
aatctccagtgagaggctgcctgctgtatcattctattgaaggttgtatt
agaatgaagggtcaacttttcctaagctccaccagagcagtgccaaggta
tctccattgggaatctccagtgaagacaagagtttgcatcaaagcatcga
tcagcatttcagaaacagctgcggcctgatacagtctctcctaacaaccc
ccagctgcattcttagacataaaaacaaaaacaaacaaaaaacaaaaaca
aaacaccagctcacgtcaaatctcagctcagctctgctgatctctgtaac
tcttaccagttaacctcccaatgtcttccatctttcaaaaatgttacatc
attgagaaacaaagaccataaaatgccaacttcaatgttcacccaaagca
gccatggctatagctatagctgaacagtagagggtccacgctcagcttca
atatcagcaaagaacaccgataggtaaaagttagtgtctatcatcagtat
cttgaattcgactataaatcataagcaatttcagtgctagttactatcca
tgtgcttgccatggcacagcacagacacagctatcctgagaacagcaagc
atgctaccttccttctttaacatcctagagtctttcacaaactaaaagag
acaggaaacatttcatgattccaaaaggaaggcctcagatatctcccaac
agtagttgggattcctctacccagttagcaaaaatactgtcattttttta
tataaattaacttcatatgatatgtaaagtgccaaacatacatcatgtga
gtccctttttatacaaaggtgacaaaagttcttttgctttaaaaaatgca
aagttattttgtagcaatggactaaagactaaaggtaaaggtaactggta
tgttctccccttcttgcctacaatgcgaagctgctgtgagaacatctcgt
tttccatgccattcattcttcacttgctagagtcatggtctcatgaaatg
attgcattgctatgtcaggctggccacttatagcagctatt
gaattctttggttctagaagaattctctttctgttgttttaaatgttacc
cttttctcatccagagaggattcaccatattttgattaaaagtaggcaga
ggtccagtcagtttctttgcttccagaatgctactcaacacagtgtatta
agaactacatcttggggctggagagatggctcagagattaagagcactga
ctattcgtgaggtcctgagttcaattcccagcaatcccatagtggctcac
aacctctattctggtgggtctgaagacagctacagtgtactcatataaaa
aaaataaatctttaaaaaaaagaactacttctctctggagttcaaatgtt
gactgctaaatttctttcaaattctggcatctgtctacggtgtctttact
acttttcagccttagctcatacatttttttttcttttgggcttgtaattt
acatatgtaaaattaattcctagtagtttgtactccttagctttaacaga
tacttagacgacattccaccatcacagcccagtcaccctcaaaatatcct
tctccccaaattaccactgaccagttttctatccctgtatgcttaccctt
catcttttaattattaattaccacggattaattttctatctataatttta
cctcttaataagtatcaatttattgtttttagacaagctttctaatgttg
cgaccctttaatacagttccgtgtgttgtgaccgcccaatgataaaatta
tttttgttgctacttcagaacggtaattttgctactgctctgaaacataa
atatctgtgttttctagtggtcttaagtgacccttgtgaaagctgggtgt
gatggcacacgcctttaatcccagcacttgggaggcagaggcaggcggat
tctgagtttgaggcatctggtctacaagtgagttccaggacatcaggcta
tacagagaaccctgtctcgaaaccataatataaatacacatgaccctgtg
aaggtcatcgccctcaactgccaagagacttggccagcgtggaatctaca
ttactacaggcagcagagattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_54686868_54688061
seq2: B6Ng01-079F03.b_44_1234

seq1  GAATTCTACATGTGGCCTGACTAACAGAATTTTGAGACAGAGTGGACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATGTGGCCTGACTAACAGAATTTTGAGACAGAGTGGACTCA  50

seq1  TCCGGATCACCTCTACTTTACTGATGAAGTAAAGCTGCATGTGTGGCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGATCACCTCTACTTTACTGATGAAGTAAAGCTGCATGTGTGGCCCA  100

seq1  TCCCAAATCTAGGCCCCAAGTGCAGAATTCGCCTCCCTAGTCTTTGGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAATCTAGGCCCCAAGTGCAGAATTCGCCTCCCTAGTCTTTGGGGT  150

seq1  AATCTCCAGTGAGAGGCTGCCTGCTGTATCATTCTATTGAAGGTTGTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCAGTGAGAGGCTGCCTGCTGTATCATTCTATTGAAGGTTGTATT  200

seq1  AGAATGAAGGGTCAACTTTTCCTAAGCTCCACCAGAGCAGTGCCAAGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAAGGGTCAACTTTTCCTAAGCTCCACCAGAGCAGTGCCAAGGTA  250

seq1  TCTCCATTGGGAATCTCCAGTGAAGACAAGAGTTTGCATCAAAGCATCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTGGGAATCTCCAGTGAAGACAAGAGTTTGCATCAAAGCATCGA  300

seq1  TCAGCATTTCAGAAACAGCTGCGGCCTGATACAGTCTCTCCTAACAACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATTTCAGAAACAGCTGCGGCCTGATACAGTCTCTCCTAACAACCC  350

seq1  CCAGCTGCATTCTTAGACATAAAAACAAAAACAAACAAAAAACAAAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGCATTCTTAGACATAAAAACAAAAACAAACAAAAAACAAAAACA  400

seq1  AAACACCAGCTCACGTCAAATCTCAGCTCAGCTCTGCTGATCTCTGTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCAGCTCACGTCAAATCTCAGCTCAGCTCTGCTGATCTCTGTAAC  450

seq1  TCTTACCAGTTAACCTCCCAATGTCTTCCATCTTTCAAAAATGTTACATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCAGTTAACCTCCCAATGTCTTCCATCTTTCAAAAATGTTACATC  500

seq1  ATTGAGAAACAAAGACCATAAAATGCCAACTTCAATGTTCACCCAAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAAACAAAGACCATAAAATGCCAACTTCAATGTTCACCCAAAGCA  550

seq1  GCCATGGCTATAGCTATAGCTGAACAGTAGAGGGTCCACGCTCAGCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGCTATAGCTATAGCTGAACAGTAGAGGGTCCACGCTCAGCTTCA  600

seq1  ATATCAGCAAAGAACACCGATAGGTAAAAGTTAGTGTCTATCATCAGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGCAAAGAACACCGATAGGTAAAAGTTAGTGTCTATCATCAGTAT  650

seq1  CTTGAATTCGACTATAAATCATAAGCAATTTCAGTGCTAGTTACTATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATTCGACTATAAATCATAAGCAATTTCAGTGCTAGTTACTATCCA  700

seq1  TGTGCTTGCCATGGCACAGCACAGACACAGCTATCCTGAGAACAGCAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTGCCATGGCACAGCACAGACACAGCTATCCTGAGAACAGCAAGC  750

seq1  ATGCTACCTTCCTTCTTTAACATCCTAGAGTC-TTCACAAACTAAAAGAG  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATGCTACCTTCCTTCTTTAACATCCTAGAGTCTTTCACAAACTAAAAGAG  800

seq1  ACAGGAAACATTTCAGGATTCCAAAAGGAAGGCCTCAGATATCTCCCAAC  849
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACAGGAAACATTTCATGATTCCAAAAGGAAGGCCTCAGATATCTCCCAAC  850

seq1  AGTAGTTGGGATTCCTCTACCCAGTTAGCAAAAATTACTGTCATTTTTTT  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGTAGTTGGGATTCCTCTACCCAGTTAGCAAAAA-TACTGTCATTTTTTT  899

seq1  ATATAAATTAACTTCATATGATATGTAAAGTGCCAAACATACATCATGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATTAACTTCATATGATATGTAAAGTGCCAAACATACATCATGTG  949

seq1  AGTTCCTTTTTATACAAAGGTGACCACAAGTC-TTTGCTTTAAAAAATGC  998
      ||| |||||||||||||||||||| | |  || |||||||||||||||||
seq2  AGTCCCTTTTTATACAAAGGTGACAAAAGTTCTTTTGCTTTAAAAAATGC  999

seq1  AAAG-TATTTTGTAGCAATGGACTAAAGACT-AAGGTGAAAGTAACTGGT  1046
      |||| |||||||||||||||||||||||||| ||||| || |||||||||
seq2  AAAGTTATTTTGTAGCAATGGACTAAAGACTAAAGGTAAAGGTAACTGGT  1049

seq1  ATGGTTCTTCCCCTTC-TGCCTACAATGCCAGAGCTGCCTGTGGAGAACA  1095
      || |||| |||||||| |||||||||||| | ||||| |||| |||||||
seq2  AT-GTTC-TCCCCTTCTTGCCTACAATGCGA-AGCTG-CTGT-GAGAACA  1094

seq1  TCTCCGTTTTCCATGCCATTCATTCCTTCATCTGC-AGAGTCATTGTCAC  1144
      ||| |||||||||||||||||||| |||||  ||| |||||||| ||| |
seq2  TCT-CGTTTTCCATGCCATTCATT-CTTCACTTGCTAGAGTCATGGTCTC  1142

seq1  AAGGAAATGAATTGTCATTGC-ATAGCAAGTCTGCCAC-TATAGCAGCTA  1192
       | |||||| |||| |||||| ||  || |   ||||| |||||||||||
seq2  -ATGAAATG-ATTG-CATTGCTATGTCAGGCTGGCCACTTATAGCAGCTA  1189

seq1  TT  1194
      ||
seq2  TT  1191

seq1: chr15_54844599_54845706
seq2: B6Ng01-079F03.g_68_1139 (reverse)

seq1  GAATCTCTTCTGCTGGGCCTGTAGTATAGTAGGTTTCCACCGCTGGGCCA  50
      |||||||| ||     ||||||||||  ||| | ||||| |||||| | |
seq2  GAATCTCTGCT-----GCCTGTAGTAATGTA-GATTCCA-CGCTGGCCAA  43

seq1  TGGTCTCTTTGGCAGTTGTAGGGGCGAATGACCTTTTCACAGGGGTCACT  100
        ||||| ||||||||||   ||||| ||||||  |||||| ||||||  
seq2  --GTCTC-TTGGCAGTTG--AGGGCG-ATGACC--TTCACA-GGGTCA--  82

seq1  GTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTG  150
               | | | ||| | || |||  ||||||||||||| |||||||
seq2  ---------TGTGTATTTATATTATGG--TTTCGAGACAGGG-TTCTCTG  120

seq1  TATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCAA  200
      |||||||   | |||||||||||||||| ||||||||||    |||||||
seq2  TATAGCC--TGATGTCCTGGAACTCACT-TGTAGACCAG--ATGCCTCAA  165

seq1  ACTCAGAAATCCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGT  250
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAG-AATCCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGT  214

seq1  GTGCCATCACACCCAGCTTTCACAAGGGTCACTTAAGACCACTAGAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCATCACACCCAGCTTTCACAAGGGTCACTTAAGACCACTAGAAAAC  264

seq1  ACAGATATTTATGTTTCAGAGCAGTAGCAAAATTACCGTTCTGAAGTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATATTTATGTTTCAGAGCAGTAGCAAAATTACCGTTCTGAAGTAGC  314

seq1  AACAAAAATAATTTTATCATTGGGCGGTCACAACACACGGAACTGTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAATAATTTTATCATTGGGCGGTCACAACACACGGAACTGTATTA  364

seq1  AAGGGTCGCAACATTAGAAAGCTTGTCTAAAAACAATAAATTGATACTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTCGCAACATTAGAAAGCTTGTCTAAAAACAATAAATTGATACTTA  414

seq1  TTAAGAGGTAAAATTATAGATAGAAAATTAATCCGTGGTAATTAATAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGGTAAAATTATAGATAGAAAATTAATCCGTGGTAATTAATAATT  464

seq1  AAAAGATGAAGGGTAAGCATACAGGGATAGAAAACTGGTCAGTGGTAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATGAAGGGTAAGCATACAGGGATAGAAAACTGGTCAGTGGTAATT  514

seq1  TGGGGAGAAGGATATTTTGAGGGTGACTGGGCTGTGATGGTGGAATGTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGAAGGATATTTTGAGGGTGACTGGGCTGTGATGGTGGAATGTCG  564

seq1  TCTAAGTATCTGTTAAAGCTAAGGAGTACAAACTACTAGGAATTAATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTATCTGTTAAAGCTAAGGAGTACAAACTACTAGGAATTAATTTT  614

seq1  ACATATGTAAATTACAAGCCCAAAAGAAAAAAAAATGTATGAGCTAAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGTAAATTACAAGCCCAAAAGAAAAAAAAATGTATGAGCTAAGGC  664

seq1  TGAAAAGTAGTAAAGACACCGTAGACAGATGCCAGAATTTGAAAGAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGTAGTAAAGACACCGTAGACAGATGCCAGAATTTGAAAGAAATT  714

seq1  TAGCAGTCAACATTTGAACTCCAGAGAGAAGTAGTTCTTTTTTTTAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTCAACATTTGAACTCCAGAGAGAAGTAGTTCTTTTTTTTAAAGA  764

seq1  TTTATTTTTTTTATATGAGTACACTGTAGCTGTCTTCAGACCCACCAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTTTTATATGAGTACACTGTAGCTGTCTTCAGACCCACCAGAA  814

seq1  TAGAGGTTGTGAGCCACTATGGGATTGCTGGGAATTGAACTCAGGACCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTTGTGAGCCACTATGGGATTGCTGGGAATTGAACTCAGGACCTC  864

seq1  ACGAATAGTCAGTGCTCTTAATCTCTGAGCCATCTCTCCAGCCCCAAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATAGTCAGTGCTCTTAATCTCTGAGCCATCTCTCCAGCCCCAAGAT  914

seq1  GTAGTTCTTAATACACTGTGTTGAGTAGCATTCTGGAAGCAAAGAAACTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCTTAATACACTGTGTTGAGTAGCATTCTGGAAGCAAAGAAACTG  964

seq1  ACTGGACCTCTGCCTACTTTTAATCAAAATATGGTGAATCCTCTCTGGAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACCTCTGCCTACTTTTAATCAAAATATGGTGAATCCTCTCTGGAT  1014

seq1  GAGAAAAGGGTAACATTTAAAACAACAGAAAGAGAATTCTTCTAGAACCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGGGTAACATTTAAAACAACAGAAAGAGAATTCTTCTAGAACCA  1064

seq1  AAGAATTC  1108
      ||||||||
seq2  AAGAATTC  1072