BAC Information

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BAC

Clone NameB6Ng01-079O21
Chromosome15 (Build37)
Map Location 58,008,441 - 58,009,200
singlet/doubletsinglet
Overlap genenone
Upstream geneBC026439, Zhx2, Derl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik
Downstream geneFbxo32, 8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e, EG631797, Tmem65, EG546638, Trmt12, Rnf139, Tatdn1, Ndufb9, Mtss1, LOC100040330
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079O21.bB6Ng01-079O21.g
ACCDH895203DH895204
length604762
definitionDH895203|Mus musculus domesticus DNA, BAC clone: B6Ng01-079O21, 5' end.DH895204|Mus musculus domesticus DNA, BAC clone: B6Ng01-079O21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttctttggagcctgctgactgacgtgactgttttcttgctag
ctgttacccagaagtccttgggactttctccagatccctatggcatgtcc
ttccacccttcctaccaccatacagtttacatccaggctgacttctttct
ccaaagccagcaaagagttcctctgggatttctgcctctgatatttaaga
actctcgtctgattgggccaggggcctcccaggatagtttccctttggat
ttcattttcctgattgaagacctggattacatctgcaaaattccccttat
gctatcagacatgatgtcatcgtgtgatcatccacacccaagggaaggag
attatactaggggtcaggtcactagggtcatttcagtactctgccaccca
cccagggctttctttagacttacatagtcttccatgaccagctttcaaag
ttcttgggcactggccactgagtggtggcatttggtatttgaggaggaag
aaagcttgcttcctagtgaattccgggttactatcagctttcactgaaga
ctgtggacttgatgagcgaccattgtggggttggagagaggtgagggaga
gagt
gaattcaggtcctcacacttacactgcaggcactttatcaactgagccat
ctccccagcacactggttacgtcttaggaagcaggtggtgctcagctgaa
tgtggcactcacagcagagtaagagggtatgaaaatgaaagagggactct
aacttctccagcaggaatcagacttaaaaggtttggaagattttgtggca
ggagcccatcatgggatcacctcccatgcctcccacagtgaagatcttgg
gaggcattacagtgggtgtcatgaatttacacacgtccacaaggtgctgg
gggagaggtgggctcaagagctctggcatcaggaagcttcaggtttctgt
tcaaccctcttgctgacctcccaggaagcacagagaaagcctctgtaccc
ccaattctggaaaggcttcctcatcttcaaatgcagaaatgccagagtcc
atactctctaacaaccccttttggtctaaagtctgggataggagtttctc
tctctccccccccaccccccacccccattttagcagagctgagaagaaga
aaatatttacagaaaacacagaatttagaggaattatgactttgtttgtt
gaagccacagagggcccatgatatatcaaagagtaacactccctgcggtt
tgccccagaggtccagggttgtttctgagtctgtttaagcactaacaggt
ttcaagccagcatccagtcagagagatggttccacagactcagatagttg
gaacggattaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_58008441_58009200
seq2: B6Ng01-079O21.g_69_830

seq1  GAATTCAGGTCCTCACACTTACACTGCAGGCACTTTATCAACTGAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCCTCACACTTACACTGCAGGCACTTTATCAACTGAGCCAT  50

seq1  CTCCCCAGCACACTGGTTACGTCTTAGGAAGCAGGTGGTGCTCAGCTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAGCACACTGGTTACGTCTTAGGAAGCAGGTGGTGCTCAGCTGAA  100

seq1  TGTGGCACTCACAGCAGAGTAAGAGGGTATGAAAATGAAAGAGGGACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCACTCACAGCAGAGTAAGAGGGTATGAAAATGAAAGAGGGACTCT  150

seq1  AACTTCTCCAGCAGGAATCAGACTTAAAAGGTTTGGAAGATTTTGTGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTCCAGCAGGAATCAGACTTAAAAGGTTTGGAAGATTTTGTGGCA  200

seq1  GGAGCCCATCATGGGATCACCTCCCATGCCTCCCACAGTGAAGATCTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCCATCATGGGATCACCTCCCATGCCTCCCACAGTGAAGATCTTGG  250

seq1  GAGGCATTACAGTGGGTGTCATGAATTTACACACGTCCACAAGGTGCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATTACAGTGGGTGTCATGAATTTACACACGTCCACAAGGTGCTGG  300

seq1  GGGAGAGGTGGGCTCAAGAGCTCTGGCATCAGGAAGCTTCAGGTTTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGGTGGGCTCAAGAGCTCTGGCATCAGGAAGCTTCAGGTTTCTGT  350

seq1  TCAACCCTCTTGCTGACCTCCCAGGAAGCACAGAGAAAGCCTCTGTACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCTCTTGCTGACCTCCCAGGAAGCACAGAGAAAGCCTCTGTACCC  400

seq1  CCAATTCTGGAAAGGCTTCCTCATCTTCAAATGCAGAAATGCCAGAGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTCTGGAAAGGCTTCCTCATCTTCAAATGCAGAAATGCCAGAGTCC  450

seq1  ATACTCTCTAACAACCCCTTTTGGTCTAAAGTCTGGGATAGGAGTTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTCTAACAACCCCTTTTGGTCTAAAGTCTGGGATAGGAGTTTCTC  500

seq1  TCTCTCCCCCCCC-CCCCCCACCCCCATTTTAGCAGAGCTGAGAAGAAGA  549
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCCCCCCACCCCCCACCCCCATTTTAGCAGAGCTGAGAAGAAGA  550

seq1  AAATATTTACAGAAAACACAGAATTTAGAGGAATTATGACTTTGTTTGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTACAGAAAACACAGAATTTAGAGGAATTATGACTTTGTTTGTT  600

seq1  GAAGCCACAGAGGGCCCATGATATATCAAAGAGTAACAC-CCCTGC-GTT  647
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  GAAGCCACAGAGGGCCCATGATATATCAAAGAGTAACACTCCCTGCGGTT  650

seq1  TGCCCCAGAGGTCCAGGGTTGTTTCTGAGTCTGTTTAAGCACTAACAGGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAGAGGTCCAGGGTTGTTTCTGAGTCTGTTTAAGCACTAACAGGT  700

seq1  TTCAAGCCAGCATCCAGTCAGGAGAGATGGTT-CACAGACTCAGATAGTT  746
      |||||||||||||||||||| ||||||||||| |||||||||||||||||
seq2  TTCAAGCCAGCATCCAGTCA-GAGAGATGGTTCCACAGACTCAGATAGTT  749

seq1  GGAAACAGATTAAA  760
      || ||| |||||||
seq2  GG-AACGGATTAAA  762