BAC Information

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BAC

Clone NameB6Ng01-080K07
Chromosome15 (Build37)
Map Location 29,170,156 - 29,171,319
singlet/doubletsinglet
Overlap genenone
Upstream geneDnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
Downstream geneLOC382975, Ctnnd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080K07.bB6Ng01-080K07.g
ACCDH895721DH895722
length1,1511,158
definitionDH895721|Mus musculus domesticus DNA, BAC clone: B6Ng01-080K07, 5' end.DH895722|Mus musculus domesticus DNA, BAC clone: B6Ng01-080K07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagtctgataagccttattccttcattaagggcatttcaactt
ggataaaacagttacaccacatgctatctctcttttccaattatcctatt
cttctagtccatcttctaggatgtttcctgaaccttggagggagtaataa
ggtattattatccacttttcatatgcaatttacattatcacaatagcctc
atggtttctggggtgtcaaggacctccctaggcaaccactaaagtggtac
acatgtctaattatctcctttctgagtctgagcattacattattacatga
taacagtctcagagtctcaaaaaatttaccagtcttaagactttaaagta
atcagaaatcatgatgaagaagtgttctgccatgaatcagtatgaaagta
attcatgagcacaaatgcaaagttccagaatataatttaacagtatgtca
catctaccatactcaacaacttgggctccttcagtagtgcctatgatgtc
tgaatcacaggtattatctctggtgtacaatacctgagctgattagactc
ctctggaattacccttaaatccaatcacaaagcagctggttgtacacctt
gtggtgctaatgttgaacagtagagatttcttgtttagcatgtgtgtgct
tagcacataacatccacagttaaatagaactattagtgatggttatcacc
agcagtgtgaatagtgcctttaaatactgagaaatccatctagccaaatg
taagcatcctggccagttgcattactttcccatgtactacaactaaagca
tgtagtatcttcagcctgtaaggttacatcatccatttctcatatacaca
taacattgtagtagtagtctaatggtctctgggtcatcagagatctctct
aggcaacaacaaataaagaggtagactaccatttttactataaatttcat
tcatcaccattgttttcactgttcttctagatgtttttccaatctgtaac
cctcaacagttaacatttgttaaatcttctaccttccaccacctgctctg
agtaagcatcaattgtgctttaatggcacacagtcactaaaatatgttga
atggtctgaataaattgagatgcatcaattaacagttttcactggaaggg
g
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagt
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcgattcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcacagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaagaagttacagagacaaagtttggagctagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttatcgaaag
gacccagatgtagttgtctcttttgagactatgcccggggctagcaaaca
cagaagtggatgctcacagtcagctatggatagatcacagggctcccaat
ggaggagctagaaaagtacccaagagctaaaggatctgcaaccctattag
tggatcacattatgactaaccagtacccggagctctgacttctagctgca
tatgtatcaaaggatggcctagtcgccatcactgaaggaggccatgaaac
gcaacttttatgccagaacaggaaccgcaggcaaaaagggatgggcggct
agggattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_29170156_29171319
seq2: B6Ng01-080K07.b_46_1196

seq1  GAATTCTGAGTCTGATAAGCCTTATTCCTTCATTAAGGGCATTTCAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGTCTGATAAGCCTTATTCCTTCATTAAGGGCATTTCAACTT  50

seq1  GGATAAAACAGTTACACCACATGCTATCTCTCTTTTCCAATTATCCTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAAACAGTTACACCACATGCTATCTCTCTTTTCCAATTATCCTATT  100

seq1  CTTCTAGTCCATCTTCTAGGATGTTTCCTGAACCTTGGAGGGAGTAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGTCCATCTTCTAGGATGTTTCCTGAACCTTGGAGGGAGTAATAA  150

seq1  GGTATTATTATCCACTTTTCATATGCAATTTACATTATCACAATAGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTATTATCCACTTTTCATATGCAATTTACATTATCACAATAGCCTC  200

seq1  ATGGTTTCTGGGGTGTCAAGGACCTCCCTAGGCAACCACTAAAGTGGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTCTGGGGTGTCAAGGACCTCCCTAGGCAACCACTAAAGTGGTAC  250

seq1  ACATGTCTAATTATCTCCTTTCTGAGTCTGAGCATTACATTATTACATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCTAATTATCTCCTTTCTGAGTCTGAGCATTACATTATTACATGA  300

seq1  TAACAGTCTCAGAGTCTCAAAAAATTTACCAGTCTTAAGACTTTAAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTCTCAGAGTCTCAAAAAATTTACCAGTCTTAAGACTTTAAAGTA  350

seq1  ATCAGAAATCATGATGAAGAAGTGTTCTGCCATGAATCAGTATGAAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAATCATGATGAAGAAGTGTTCTGCCATGAATCAGTATGAAAGTA  400

seq1  ATTCATGAGCACAAATGCAAAGTTCCAGAATATAATTTAACAGTATGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGAGCACAAATGCAAAGTTCCAGAATATAATTTAACAGTATGTCA  450

seq1  CATCTACCATACTCAACAACTTGGGCTCCTTCAGTAGTGCCTATGATGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACCATACTCAACAACTTGGGCTCCTTCAGTAGTGCCTATGATGTC  500

seq1  TGAATCACAGGTATTATCTCTGGTGTACAATACCTGAGCTGATTAGACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCACAGGTATTATCTCTGGTGTACAATACCTGAGCTGATTAGACTC  550

seq1  CTCTGGAATTACCCTTAAATCCAATCACAAAGCAGCTGGTTGTACACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAATTACCCTTAAATCCAATCACAAAGCAGCTGGTTGTACACCTT  600

seq1  GTGGTGCTAATGTTGAACAGTAGAGATTTCTTGTTTAGCATGTGTGTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCTAATGTTGAACAGTAGAGATTTCTTGTTTAGCATGTGTGTGCT  650

seq1  TAGCACATAACATCCACAGTTAAATAGAACTATTAGTGATGGTTATCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACATAACATCCACAGTTAAATAGAACTATTAGTGATGGTTATCACC  700

seq1  AGCAGTGTGAATAGTGCCTTTAAATACTGAGAAATCCATCTAGCCAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGTGAATAGTGCCTTTAAATACTGAGAAATCCATCTAGCCAAATG  750

seq1  TAAGCATCCTGGCCAGTTGCATTACTTTCCCATGTACTACAACTAAAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATCCTGGCCAGTTGCATTACTTTCCCATGTACTACAACTAAAGCA  800

seq1  TGTAGTATCTTCAGCCTGTAAGGTTACATCATCCATTTCTCATATACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTATCTTCAGCCTGTAAGGTTACATCATCCATTTCTCATATACACA  850

seq1  TAACATTGTAGTAGTAGTCTAATGGTCTCTGGGTCATCAGAGATCTCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTGTAGTAGTAGTCTAATGGTCTCTGGGTCATCAGAGATCTCTCT  900

seq1  AGGCAACAACAAATAAAGAGGTAGACTACCATTTTTACTATAAATTTCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACAACAAATAAAGAGGTAGACTACCATTTTTACTATAAATTTCAT  950

seq1  TCATCACCATTGTTTTCACTGTTCTTCTAGATGTTTTTCCAAATCTGTAA  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||  
seq2  TCATCACCATTGTTTTCACTGTTCTTCTAGATGTTTTTCC-AATCTGT--  997

seq1  AACACTCAACAGTTAACATTGTATAAAATC-TCTACCTACCACCACCTGC  1049
      ||| |||||||||||||||| | | ||||| ||||||| |||||||||||
seq2  AACCCTCAACAGTTAACATT-TGTTAAATCTTCTACCTTCCACCACCTGC  1046

seq1  TCTGAGTAAGCATCAATTGGTCTTAAATGGCACACAAGTCACTAAAAATA  1099
      |||||||||||||||||||  ||| |||||||||| |||||||||||   
seq2  TCTGAGTAAGCATCAATTGTGCTTTAATGGCACAC-AGTCACTAAAA--T  1093

seq1  ATGTTGAAATGGTCTGATATAAAATGAAGAGTGCATCAATTATAACAGTT  1149
      |||||| |||||||||| ||||| || ||| |||||||||  |||||| |
seq2  ATGTTG-AATGGTCTGA-ATAAATTG-AGA-TGCATCAAT--TAACAG-T  1136

seq1  TTTCACTGGAAGGGG  1164
      |||||||||||||||
seq2  TTTCACTGGAAGGGG  1151