BAC Information

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BAC

Clone NameB6Ng01-080L24
Chromosome15 (Build37)
Map Location 27,325,487 - 27,458,943
singlet/doubletdoublet
Overlap geneAnk
Upstream geneFbxl7, LOC622531, LOC625311
Downstream geneBC087945, LOC100040622, BC052328, Trio, LOC667126, Dnahc5, EG382974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080L24.bB6Ng01-080L24.g
ACCDH895799DH895800
length1,1151,180
definitionDH895799|Mus musculus domesticus DNA, BAC clone: B6Ng01-080L24, 5' end.DH895800|Mus musculus domesticus DNA, BAC clone: B6Ng01-080L24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,457,817 - 27,458,943)(27,325,487 - 27,326,661)
sequence
cagagaaaaacagggatgaggaaaaacaggaagtcccaactttgaaaaac
atccaatctaccttctatgcaaaccacagaaagattagacaaaccaagta
cttgttgacattggctgtaaactttgcaaaaaggatacagccttaaaata
cacctggaacaagaccaagtcacctcctcaccggcctttctatccctttg
taaattgtattttaaaggaactgctaagcaggaataaaaaacaagcctta
aaagaattgtagggagacgccactgctgatgagtatctggatgctcgggg
gtctggctgggcatttctcaggagttaccacatttaatttcatccttctg
aaaagcctcggctccggtgaaaggtgggaaatagagccttagccagaagc
ataatctctcaaggctgcaaagcacctaagaggcaggattagaagttcag
ccacatgcttcatttttccatctgcaagctgggcgattgtaagtgtgacc
tccctgagattaagaaagtatcctaaagcccggcgtggtggcgcatgcct
ttaatcccagtatttgggaggcagaggcaggtggatttttgagtttgagg
ccagcctggtctacagagtgagttccaggacagccaggactacacagaga
aaccctgtctctaaaaaccaaccccctcccccccaacaaaaaataagctt
agccaaatagggatatccctaaaagtctgccttgtatacgatggatttgg
gggctaacccattctgtgatggtttgaatgagtatgacccacccactcac
ataggctcttgtacttaacgcttggtccccagttgattgttcccagttgg
gaaggattaggaggtgtgggccttgtaggaggaggtatgtcattgggctt
gggcttgggagttccagagcccatgccattcccattagctgtctttcagc
ctcagttcatgggtcagatggaagtactcagctactgctcagcactgtgc
ctgcctgcctgctgccatgtcttgccatggtggggaatatggctaaactc
tggactataacgcccaacctttcgtctgtagttgccttgccatagtgctt
gtccccagcatcgac
gaattcagtgtatgtttatggatgggacgctcctgaattcctggcaccta
ggggtctggggcaggagaatctggagtttagagccagcttaggcctcaag
aaagacaatttctaagaacataaaataacaatagcagaataaaactcttt
aataagaactaaggcaaaatactaactggggttgcttcaagaaataaccc
cacagtctgggaaagtggcttactgcttaagagcattcaatactctagtg
aaagacctgggtacaagtcccagcacccacatagtggctcacaaccatct
gtaatggggtctgatgtcctcttctggtatgtctgaagacagctactcaa
atacataaaataaataaatctttttaaaaaaaaaatagttcatctgccaa
tcatggtagagcacacctataatcctggcactcaggaaatgaaggcaaga
ggaagggagttcaaggctaccttctgctacacagcaagtttgaggccagg
ctgggctgcagggaaagctcaccagccctgcatttgcctcaaagcacaca
ctgcactggacagcttcccacttcaccctcaaaataaccctctgaggtct
gtagtcctgacgctttctcactgtacactaagaaatccaaagcccaggaa
ggcagaatgacttgttcaaagcgagagcaggcagtcagaggcttggtttt
gaactaatctcatcacacaggatcccaggatctcaacaaccacgcagact
cctattctcattttgttttcattgccaggcctcagcatgacagctctgtg
ttacaaccatggggaatcataaaccaggctgcttagaaatagagaactca
ggctgaataattttcattaaaatcagcctgtttgttaattaaagaatatt
aatattctttagggagtattacttatttgggatttatttattattagaca
cagtttgcttgctacaatatctcactttctgtctagccttctcttttcag
tatagatctgaaaggcagcttgtgtagcttagttgggtgaaatatcataa
ctcacaatattattgagaccaaagactgtgccatagatcagtggtttctt
cgaagagaagcattcaatgtcaatttggatagtagattaataaagctgtc
tctggctaatgtgaatggatgtcgatgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_27457817_27458943
seq2: B6Ng01-080L24.b_52_1166 (reverse)

seq1  GTCGATTGCTGGGACAAAGCACTATGGCCAAGGCAACTTACAGACGAAAA  50
      ||||| |||||||   ||||||||||| ||||||||| |||||||| |||
seq2  GTCGA-TGCTGGGGACAAGCACTATGG-CAAGGCAAC-TACAGACG-AAA  46

seq1  GTTTGGGCGTTTATAGTTCCAGAGGTTTAGCCATATTCCCCACCATGGCA  100
      | ||||||| |||||| |||||| ||||||||||||||||||||||||||
seq2  GGTTGGGCG-TTATAG-TCCAGA-GTTTAGCCATATTCCCCACCATGGCA  93

seq1  GAGAACATGGCAGCAGGCAGGCAGGCACAGTGCTGGAGCAGTAGCTGAGT  150
       || |||||||||||||||||||||||||||||| |||||||||||||||
seq2  -AG-ACATGGCAGCAGGCAGGCAGGCACAGTGCT-GAGCAGTAGCTGAGT  140

seq1  ACTTCCATCTGACCCATGAACCTGAGGCTGAAAGACAGCTAATGGGAATG  200
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACTTCCATCTGACCCATGAA-CTGAGGCTGAAAGACAGCTAATGGGAATG  189

seq1  GCATGGGCTCTGGAAACTCCCAAGCCCAAGCCCAATGACATACCTCCTCC  250
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCATGGGCTCTGG-AACTCCCAAGCCCAAGCCCAATGACATACCTCCTCC  238

seq1  TACAAGG-CCACACCTCCTAATCCTTCCCAACTGGGAACAATCAACTGGG  299
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGCCCACACCTCCTAATCCTTCCCAACTGGGAACAATCAACTGGG  288

seq1  GACCAAGCGTTTAAGTACAAGAGCCTATGTGAGTGGGTGGGTCATACTCA  349
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGCG-TTAAGTACAAGAGCCTATGTGAGTGGGTGGGTCATACTCA  337

seq1  TTCAAACCATCACAGAATGGGTTAGCCCCCAAATCCATCGTATACAAGGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACCATCACAGAATGGGTTAGCCCCCAAATCCATCGTATACAAGGC  387

seq1  AGACTTTTAGGGATATCCCTATTTGGCTAAGCTTATTTTTTGTTGGGGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTTAGGGATATCCCTATTTGGCTAAGCTTATTTTTTGTTGGGGGG  437

seq1  GAGGGGGTTGGTTTTTAGAGACAGGGTTTCTCTGTGTAGTCCTGGCTGTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGTTGGTTTTTAGAGACAGGGTTTCTCTGTGTAGTCCTGGCTGTC  487

seq1  CTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAACTCAAAAATCCACCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAACTCAAAAATCCACCT  537

seq1  GCCTCTGCCTCCCAAATACTGGGATTAAAGGCATGCGCCACCACGCCGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGCCTCCCAAATACTGGGATTAAAGGCATGCGCCACCACGCCGGG  587

seq1  CTTTAGGATACTTTCTTAATCTCAGGGAGGTCACACTTACAATCGCCCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGATACTTTCTTAATCTCAGGGAGGTCACACTTACAATCGCCCAG  637

seq1  CTTGCAGATGGAAAAATGAAGCATGTGGCTGAACTTCTAATCCTGCCTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGATGGAAAAATGAAGCATGTGGCTGAACTTCTAATCCTGCCTCT  687

seq1  TAGGTGCTTTGCAGCCTTGAGAGATTATGCTTCTGGCTAAGGCTCTATTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGCTTTGCAGCCTTGAGAGATTATGCTTCTGGCTAAGGCTCTATTT  737

seq1  CCCACCTTTCACCGGAGCCGAGGCTTTTCAGAAGGATGAAATTAAATGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTTTCACCGGAGCCGAGGCTTTTCAGAAGGATGAAATTAAATGTG  787

seq1  GTAACTCCTGAGAAATGCCCAGCCAGACCCCCGAGCATCCAGATACTCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTCCTGAGAAATGCCCAGCCAGACCCCCGAGCATCCAGATACTCAT  837

seq1  CAGCAGTGGCGTCTCCCTACAATTCTTTTAAGGCTTGTTTTTTATTCCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTGGCGTCTCCCTACAATTCTTTTAAGGCTTGTTTTTTATTCCTG  887

seq1  CTTAGCAGTTCCTTTAAAATACAATTTACAAAGGGATAGAAAGGCCGGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCAGTTCCTTTAAAATACAATTTACAAAGGGATAGAAAGGCCGGTG  937

seq1  AGGAGGTGACTTGGTCTTGTTCCAGGTGTATTTTAAGGCTGTATCCTTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTGACTTGGTCTTGTTCCAGGTGTATTTTAAGGCTGTATCCTTTT  987

seq1  TGCAAAGTTTACAGCCAATGTCAACAAGTACTTGGTTTGTCTAATCTTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGTTTACAGCCAATGTCAACAAGTACTTGGTTTGTCTAATCTTTC  1037

seq1  TGTGGTTTGCATAGAAGGTAGATTGGATGTTTTTCAAAGTTGGGACTTCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTGCATAGAAGGTAGATTGGATGTTTTTCAAAGTTGGGACTTCC  1087

seq1  TGTTTTTCCTCATCCCTGTTTTTCTCTG  1127
      ||||||||||||||||||||||||||||
seq2  TGTTTTTCCTCATCCCTGTTTTTCTCTG  1115

seq1: chr15_27325487_27326661
seq2: B6Ng01-080L24.g_69_1248

seq1  GAATTCAGTGTATGTTTATGGATGGGACGCTCCTGAATTCCTGGCACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTATGTTTATGGATGGGACGCTCCTGAATTCCTGGCACCTA  50

seq1  GGGGTCTGGGGCAGGAGAATCTGGAGTTTAGAGCCAGCTTAGGCCTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTGGGGCAGGAGAATCTGGAGTTTAGAGCCAGCTTAGGCCTCAAG  100

seq1  AAAGACAATTTCTAAGAACATAAAATAACAATAGCAGAATAAAACTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAATTTCTAAGAACATAAAATAACAATAGCAGAATAAAACTCTTT  150

seq1  AATAAGAACTAAGGCAAAATACTAACTGGGGTTGCTTCAAGAAATAACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAACTAAGGCAAAATACTAACTGGGGTTGCTTCAAGAAATAACCC  200

seq1  CACAGTCTGGGAAAGTGGCTTACTGCTTAAGAGCATTCAATACTCTAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCTGGGAAAGTGGCTTACTGCTTAAGAGCATTCAATACTCTAGTG  250

seq1  AAAGACCTGGGTACAAGTCCCAGCACCCACATAGTGGCTCACAACCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCTGGGTACAAGTCCCAGCACCCACATAGTGGCTCACAACCATCT  300

seq1  GTAATGGGGTCTGATGTCCTCTTCTGGTATGTCTGAAGACAGCTACTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGGGGTCTGATGTCCTCTTCTGGTATGTCTGAAGACAGCTACTCAA  350

seq1  ATACATAAAATAAATAAATCTTTTTAAAAAAAAAATAGTTCATCTGCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAAAATAAATAAATCTTTTTAAAAAAAAAATAGTTCATCTGCCAA  400

seq1  TCATGGTAGAGCACACCTATAATCCTGGCACTCAGGAAATGAAGGCAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTAGAGCACACCTATAATCCTGGCACTCAGGAAATGAAGGCAAGA  450

seq1  GGAAGGGAGTTCAAGGCTACCTTCTGCTACACAGCAAGTTTGAGGCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGAGTTCAAGGCTACCTTCTGCTACACAGCAAGTTTGAGGCCAGG  500

seq1  CTGGGCTGCAGGGAAAGCTCACCAGCCCTGCATTTGCCTCAAAGCACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTGCAGGGAAAGCTCACCAGCCCTGCATTTGCCTCAAAGCACACA  550

seq1  CTGCACTGGACAGCTTCCCACTTCACCCTCAAAATAACCCTCTGAGGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTGGACAGCTTCCCACTTCACCCTCAAAATAACCCTCTGAGGTCT  600

seq1  GTAGTCCTGACGCTTTCTCACTGTACACTAAGAAATCCAAAGCCCAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCCTGACGCTTTCTCACTGTACACTAAGAAATCCAAAGCCCAGGAA  650

seq1  GGCAGAATGACTTGTTCAAAGCGAGAGCAGGCAGTCAGAGGCTTGGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAATGACTTGTTCAAAGCGAGAGCAGGCAGTCAGAGGCTTGGTTTT  700

seq1  GAACTAATCTCATCACACAGGATCCCAGGATCTCAACAACCACGCAGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAATCTCATCACACAGGATCCCAGGATCTCAACAACCACGCAGACT  750

seq1  CCTATTCTCATTTTGTTTTCATTGCCAGGCCTCAGCATGACAGCTCTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCTCATTTTGTTTTCATTGCCAGGCCTCAGCATGACAGCTCTGTG  800

seq1  TTACAACCATGGGGAATCATAAACCAGGCTGCTTAGAAATAGAGAACTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACCATGGGGAATCATAAACCAGGCTGCTTAGAAATAGAGAACTCA  850

seq1  GGCTGAATAATTTTCATTAAAATCAGCCTG-TTGTTAA-TAAAGAATATT  898
      |||||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  GGCTGAATAATTTTCATTAAAATCAGCCTGTTTGTTAATTAAAGAATATT  900

seq1  AATATTCTTTAGGGAGTATTAC-TATTTGGGA-TTATTTA-TATTAGACA  945
      |||||||||||||||||||||| ||||||||| ||||||| |||||||||
seq2  AATATTCTTTAGGGAGTATTACTTATTTGGGATTTATTTATTATTAGACA  950

seq1  CAGTTTGCTTGCTACAATATCTCACTTTCTGTCTAGCCTTCCTCTGTCAG  995
      |||||||||||||||||||||||||||||||||||||||||   | ||||
seq2  CAGTTTGCTTGCTACAATATCTCACTTTCTGTCTAGCCTTCTCTTTTCAG  1000

seq1  TATAGATCTTGAAAGGCAGGCTTGTGTAGCCTAAGTGGGTGACATATCAT  1045
      |||||||| ||||||||| ||||||||||| ||  ||||||| |||||||
seq2  TATAGATC-TGAAAGGCA-GCTTGTGTAGCTTAGTTGGGTGAAATATCAT  1048

seq1  AACTCAC-ATA-TATTGAAGACAAAGACTGTGGCATAGATCAGTG--TTC  1091
      ||||||| ||| ||||||   ||||||||||| ||||||||||||  |||
seq2  AACTCACAATATTATTGAGACCAAAGACTGTGCCATAGATCAGTGGTTTC  1098

seq1  TTCAAAGAG-AGCA-TCCATGTCAATTT-GATAGTAGGATAATAAAAGCT  1138
      ||| ||||| |||| || |||||||||| ||||||||  |||| ||||||
seq2  TTCGAAGAGAAGCATTCAATGTCAATTTGGATAGTAGATTAAT-AAAGCT  1147

seq1  GTCTCTGGGTTAATGTTGAATGGAGTGTCCTATGTGT  1175
      |||||| || ||||| |||||||| ||| | ||||||
seq2  GTCTCT-GGCTAATG-TGAATGGA-TGT-CGATGTGT  1180