BAC Information

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BAC

Clone NameB6Ng01-084B02
Chromosome15 (Build37)17 (Build37)
Map Location 88,882,599 - 88,883,83429,918,414 - 29,918,996
singlet/doubletsingletsinglet
Overlap geneMov10l1
Upstream geneLOC100042340, Zdhhc25, Brd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558
Downstream genePanx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1, Adm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3, Acr, Rabl2a, LOC676575, Syt10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084B02.bB6Ng01-084B02.g
ACCDH898142DH898143
length1,195498
definitionDH898142|Mus musculus domesticus DNA, BAC clone: B6Ng01-084B02, 5' end.DH898143|Mus musculus domesticus DNA, BAC clone: B6Ng01-084B02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(88,882,599 - 88,883,834)(29,918,414 - 29,918,996)
sequence
gaattctctaacatcctctcattgggtgttaatggcaccaaggataccta
gctgcagaggtagtctgagaatggtgtgtattgctgtgatcaagacactg
tgactcaggacactgcctctcaaatccctgcatgtcctcacatcagaagc
aggtttgaataattagaaatgccggataaacaggtcagagcacaactgct
gaagaccgggacactgagcttgtgcacagcagtgctgcactagctctagg
ctacagaagcagtgggtcattctatggcaaaccagtgtgacagccgtggg
acaatggactaatgtcccaggctctgcatctggccacatggtccctgtgt
gccttcctaagcatcacatgccagagagctgtagggactctatggtggtt
ggaatgaaaatgccccagagactcatttttgtccctagttgatgaaactg
tcgacattgtagcatctgttcctgcagactcccagcagtcacccattaag
cttacagtgtcctagcacttctgtatccacagcctcaaaatgctcctaag
ttccttgtgctgaccagctgcaaaagcctgagagtgacaggatcaagctt
tgctgtagcaaaggccacacttctcccacacatattttctgttacatccc
cacatcaccttgagaaactgatgaaacaactcagtggggaggagaggact
cacgttggctcatgatttcagaggacttcattcgtcacagtggggaagac
atggtggagtagcttagtccatgacagcagagcatgtggcagagactgtt
gacatcaccgaggactaggacgcaaggttagacggcccttgagaagccct
cagtgacctacttctccttgctgagcccactctctaaaagttgcagagct
tcccaaaacagtgctaccagctgtggaccaagtactcagaataagagtgg
gaaaggaagatccaaccatgctagtaggcgggcgtggtggcgctcgcttt
gatccctgcactgggaggcagagcagtcgatttctgattcgagtcagctg
ttacagagtgagtttcagcacagcaggctaaccagtgaactgtctcgaaa
caaacaacatcctagatttgtacttaaagtaaattctttgatttttaagt
atttaacttgaacctctttaagggtaaaactaaatccttctgcga
gaattccaggacagccagagctatacagagaaaccctgtcttgaaaaaca
aaaacaaaccaaccaaacaaacaaacacaagccagtggtggtggtgcaca
cctttattctcagcattctggaggaaaaggcaggcagagctccgaattca
agaccagcctggtctacagatagagttctaggacagccagaaatacacag
agaaacactgtcttgagaaggggggcggggggagagaagccaggtctagc
gattgggggaattaacttagcaattaatagcactagctgctcttccaggg
aacctggatttgattcccagcaaccatgtgtcaacctacaatcacctgca
attccagttccaaggtctactgctggcctctcctcacacataaacagttt
gtttatttgtttgtttttttgagacagggttttcaatttaaaaaggaagg
aaggaaggaagaaagaaagaaagaaaggaaggaaggaaggaaggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_88882599_88883834
seq2: B6Ng01-084B02.b_46_1240

seq1  GAATTCTCTAACATCCTCTCATTGGGTGTTAATGGCACCAAGGATACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAACATCCTCTCATTGGGTGTTAATGGCACCAAGGATACCTA  50

seq1  GCTGCAGAGGTAGTCTGAGAATGGTGTGTATTGCTGTGATCAAGACACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGAGGTAGTCTGAGAATGGTGTGTATTGCTGTGATCAAGACACTG  100

seq1  TGACTCAGGACACTGCCTCTCAAATCCCTGCATGTCCTCACATCAGAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCAGGACACTGCCTCTCAAATCCCTGCATGTCCTCACATCAGAAGC  150

seq1  AGGTTTGAATAATTAGAAATGCCGGATAAACAGGTCAGAGCACAACTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGAATAATTAGAAATGCCGGATAAACAGGTCAGAGCACAACTGCT  200

seq1  GAAGACCGGGACACTGAGCTTGTGCACAGCAGTGCTGCACTAGCTCTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCGGGACACTGAGCTTGTGCACAGCAGTGCTGCACTAGCTCTAGG  250

seq1  CTACAGAAGCAGTGGGTCATTCTATGGCAAACCAGTGTGACAGCCGTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAAGCAGTGGGTCATTCTATGGCAAACCAGTGTGACAGCCGTGGG  300

seq1  ACAATGGACTAATGTCCCAGGCTCTGCATCTGGCCACATGGTCCCTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGACTAATGTCCCAGGCTCTGCATCTGGCCACATGGTCCCTGTGT  350

seq1  GCCTTCCTAAGCATCACATGCCAGAGAGCTGTAGGGACTCTATGGTGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCTAAGCATCACATGCCAGAGAGCTGTAGGGACTCTATGGTGGTT  400

seq1  GGAATGAAAATGCCCCAGAGACTCATTTTTGTCCCTAGTTGATGAAACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAAAATGCCCCAGAGACTCATTTTTGTCCCTAGTTGATGAAACTG  450

seq1  TCGACATTGTAGCATCTGTTCCTGCAGACTCCCAGCAGTCACCCATTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACATTGTAGCATCTGTTCCTGCAGACTCCCAGCAGTCACCCATTAAG  500

seq1  CTTACAGTGTCCTAGCACTTCTGTATCCACAGCCTCAAAATGCTCCTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGTGTCCTAGCACTTCTGTATCCACAGCCTCAAAATGCTCCTAAG  550

seq1  TTCCTTGTGCTGACCAGCTGCAAAAGCCTGAGAGTGACAGGATCAAGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGTGCTGACCAGCTGCAAAAGCCTGAGAGTGACAGGATCAAGCTT  600

seq1  TGCTGTAGCAAAGGCCACACTTCTCCCACACATATTTTCTGTTACATCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAGCAAAGGCCACACTTCTCCCACACATATTTTCTGTTACATCCC  650

seq1  CACATCACCTTGAGAAACTGATGAAACAACTCAGTGGGGAGGAGAGGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCACCTTGAGAAACTGATGAAACAACTCAGTGGGGAGGAGAGGACT  700

seq1  CACGTTGGCTCATGATTTCAGAGGACTTCATTCGTCACAGTGGGGAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTGGCTCATGATTTCAGAGGACTTCATTCGTCACAGTGGGGAAGAC  750

seq1  ATGGTGGAGTAGCTTAGTCCATGACAGCAGAGCATGTGGCAGAGACTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGAGTAGCTTAGTCCATGACAGCAGAGCATGTGGCAGAGACTGTT  800

seq1  GACATCACCGAGGACTAGGACGCAAGGTTAGACGGCCCTTGAGAAGCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCACCGAGGACTAGGACGCAAGGTTAGACGGCCCTTGAGAAGCCCT  850

seq1  CAGTGACCTACTTCTCCTTGCTGAGCCCACTCTCTAAAAGTTGCAGAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACCTACTTCTCCTTGCTGAGCCCACTCTCTAAAAGTTGCAGAGCT  900

seq1  TCCCAAAACAGTGCTACCAGCTGTGGACCAAGTACTCAGAATAAGAGTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAACAGTGCTACCAGCTGTGGACCAAGTACTCAGAATAAGAGTGG  950

seq1  GAAAGGAAGATCCAAACCATGCTAGTAAGGCCGGGCGTGGTGGCGCTCGC  1000
      ||||||||||||| |||||||||||||  | |||||||||||||||||| 
seq2  GAAAGGAAGATCC-AACCATGCTAGTA--GGCGGGCGTGGTGGCGCTCG-  996

seq1  CTTTGATCCCTGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAATTCGA  1050
      ||||||||||||||| ||||||||||| |||| | |||||||| ||||||
seq2  CTTTGATCCCTGCAC-TGGGAGGCAGA-GCAGTC-GATTTCTG-ATTCGA  1042

seq1  GGCCAGCCTGGTCTACAGAGTGAGTTCCAGCACAGCCAGGGCTACACAGT  1100
       | ||| |||   ||||||||||||| |||||||||   |||||  ||||
seq2  -GTCAG-CTG--TTACAGAGTGAGTTTCAGCACAGC--AGGCTAACCAGT  1086

seq1  GAAACCCTGTCTCAGAAACAAAACAAAACATACTAGTATTTGGTTTAACT  1150
      |||   ||||||| |||||||   | ||||| |||| |||||     |||
seq2  GAA---CTGTCTC-GAAACAA---ACAACATCCTAG-ATTTG----TACT  1124

seq1  ATAATAGTAAATATCTTGATTTTTTAATGTTATTTTTAATCTTATAACCT  1200
       ||| |||||||   ||||||||| |    |||||   | |||  |||||
seq2  -TAA-AGTAAATTCTTTGATTTTTAA---GTATTT---AACTT-GAACCT  1165

seq1  CTTTTAAAGGTGGAAAAAATAAAAATCCTTCTGCGA  1236
      ||||  |||  || |||| |  ||||||||||||||
seq2  CTTT--AAG--GGTAAAACT--AAATCCTTCTGCGA  1195

seq1: chr17_29918414_29918996
seq2: B6Ng01-084B02.g_72_566

seq1  TTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACCAAA  50
      ||||||||||||||| |||||||||||||||||||||| ||||||| |||
seq2  TTCCAGGACAGCCAGAGCTATACAGAGAAACCCTGTCTTGAAAAACAAAA  50

seq1  AAAACCAAACCAAACCAACCAAACAAACAAACAAAACAAAAACCTGTGTC  100
      |         ||||||||||||||||||||||| ||   |    ||    
seq2  A---------CAAACCAACCAAACAAACAAACACAAGCCAGTGGTGGTGG  91

seq1  TTCCCGCCTCAAAGATCTGAATTAGAAGTGGATCTTCCAATTAAACAAAA  150
      | | | |||  |   || | |||     |||            |  ||||
seq2  TGCACACCTTTATTCTCAGCATT----CTGG------------AGGAAAA  125

seq1  TTAAGCAAATTAAGCA-AACTAAGAAAAAAAAAATTCCCTCACAGGTGTG  199
         ||        ||| | ||  |        |||||     |||     
seq2  GGCAG--------GCAGAGCTCCG--------AATTCAAGACCAG-----  154

seq1  CCCCTTCGGTTTTGTTTTGTTTTGGTTTTGGTTTTGGTTTTGGTTAACTC  249
        ||                                    ||||   || 
seq2  --CC------------------------------------TGGT---CTA  163

seq1  CAGATCTGTGTAGTCAAGTTGACAACCAAAAATAGCTGTCACAG---ACC  296
      |||||  | ||  || ||  |||| ||| |||||     |||||   | |
seq2  CAGAT-AGAGT--TCTAG--GACAGCCAGAAATA-----CACAGAGAAAC  203

seq1  CCTGTATCAAGAAATCAAACGGGGCTGGAGAGA----------------T  330
       |||| |  ||||      |||||  |||||||                |
seq2  ACTGTCTTGAGAAGGGGGGCGGGG--GGAGAGAAGCCAGGTCTAGCGATT  251

seq1  GG---------CTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCC  371
      ||         || ||   |||| ||||||  |||||||||||| |  ||
seq2  GGGGGAATTAACTTAGCAATTAATAGCACTAGCTGCTCTTCCAGGGAACC  301

seq1  TGAGTTCAAATCCTAGCAACCACATGGTGGCTCACAACTATCTGTGATGG  421
      ||  ||  | ||| ||||||||  ||    |  ||||  | |||  ||  
seq2  TGGATTTGATTCCCAGCAACCATGTGTCAACCTACAATCACCTGCAAT--  349

seq1  GATCTGATGCCCTCTTCTGGTGTGTCTGAAGATAGCTACTCATCATATAT  471
        ||   | ||    |||  ||   |||      ||  ||| ||| | ||
seq2  --TCCAGTTCCAAGGTCTACTG---CTG------GCCTCTCCTCACACAT  388

seq1  ATAAAATATATACAGTACTCATCATATATATAAAATAAAAAAAAATCTTT  521
      | | | | | |  | |        | | | |    |  | | |    |||
seq2  AAACAGTTTGTTTATT--------TGTTTGTTTTTTTGAGACAGGGTTTT  430

seq1  AGAAAGAAAAAAGAGGGA---AAGGAAGGAAGGAAGGAAGGAAGGAAGGA  568
        |   ||||| || |||   ||||||| ||| ||| ||| |||||||||
seq2  CAATTTAAAAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGGAAGGA  480

seq1  AGGAAGGAAGGAAGG  583
      |||||||||||||||
seq2  AGGAAGGAAGGAAGG  495