BAC Information

Click to search

BAC

Clone NameB6Ng01-086I12
Chromosome15 (Build37)
Map Location 60,294,080 - 60,461,254
singlet/doubletdoublet
Overlap geneLOC623094
Upstream geneNsmce2, Trib1, LOC665602, EG632248, LOC665613, 4933412E24Rik, LOC100040266, LOC623048, LOC211832
Downstream geneEG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086I12.bB6Ng01-086I12.g
ACCDH899900DH899901
length912309
definitionDH899900|Mus musculus domesticus DNA, BAC clone: B6Ng01-086I12, 5' end.DH899901|Mus musculus domesticus DNA, BAC clone: B6Ng01-086I12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,294,080 - 60,294,601)(60,460,946 - 60,461,254)
sequence
gaattcattttaaaaacttaaaagacaaatcagagagaagacaatgttgc
ccacttccttagtagcttttcaatatagtactagaagttttatctagagc
aataagacaactaaacgagatcaagtggattcaaaatggaaagaagtcaa
agtattgctatttgcagatgatgtgatagtgatctcaaaatttctaccag
agaactcctacagctgataaataccttcagtaaattgactggttacagaa
ttaatacaaaaaagcagtagccctccttaatataaataatcaatgagctg
ggaaaaattaggaaagcaccattcttcacaatagccaaaacgaatataaa
atattttggtgtaactctaacccaagcaagtgaaagtgctgtgtgacaag
atctttgagtctttgaagaaaaatcaaaaatgaggaatatttcagaagat
acagaagatagaaaggtctacaatactcattaattgataggattaacata
ggaaaactggccatcttaccaaaagcaacactgtaaaagcaatattcaac
ttcgtatggaaacccaaaatcccaggatagttaaagtaatcctgtacaat
aaaaggacttctgaaggtatcaccatcctcaatcttaagctgtactacaa
taagtaacagtaagacaaactgcatggtattggcctagaatatcatgcag
acaggttaatcaatggaatcaaatcaaaggcccagaagtaaacccacata
catgtgcacacttgagttttgacaaagaagacaaaaaaaatacaatggaa
agggagaaacatcttcaaccaatggtgatgatctaattggatgttgcatg
tagaagaatgcaaatagaactatgtttgtcaccctgtacaaaactcaagt
caagtgatcaaa
tcagcacttgagacagcatgtataagacccacacaagcttacaccacaca
atattccagtatgaagaaggaaggcaagcatgaagttcccctcttagata
aggagcacttagaagctgattgcttctgggagagggagagtaggttttct
ttaatgttgaggcccttggttcatttcttcttcttggatatgtagaaaag
acagagacgcatccaggagtgtggggaagcacaatttttacaccgtgggt
ctaaaaacaaaacaggataccaagttgggtgtgatggattggggaggagt
taggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_60294080_60294601
seq2: B6Ng01-086I12.b_48_569

seq1  GAATTCATTTTAAAAACTTAAAAGACAAATCAGAGAGAAGACAATGTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTAAAAACTTAAAAGACAAATCAGAGAGAAGACAATGTTGC  50

seq1  CCACTTCCTTAGTAGCTTTTCAATATAGTACTAGAAGTTTTATCTAGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCCTTAGTAGCTTTTCAATATAGTACTAGAAGTTTTATCTAGAGC  100

seq1  AATAAGACAACTAAACGAGATCAAGTGGATTCAAAATGGAAAGAAGTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGACAACTAAACGAGATCAAGTGGATTCAAAATGGAAAGAAGTCAA  150

seq1  AGTATTGCTATTTGCAGATGATGTGATAGTGATCTCAAAATTTCTACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGCTATTTGCAGATGATGTGATAGTGATCTCAAAATTTCTACCAG  200

seq1  AGAACTCCTACAGCTGATAAATACCTTCAGTAAATTGACTGGTTACAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCCTACAGCTGATAAATACCTTCAGTAAATTGACTGGTTACAGAA  250

seq1  TTAATACAAAAAAGCAGTAGCCCTCCTTAATATAAATAATCAATGAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACAAAAAAGCAGTAGCCCTCCTTAATATAAATAATCAATGAGCTG  300

seq1  GGAAAAATTAGGAAAGCACCATTCTTCACAATAGCCAAAACGAATATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAATTAGGAAAGCACCATTCTTCACAATAGCCAAAACGAATATAAA  350

seq1  ATATTTTGGTGTAACTCTAACCCAAGCAAGTGAAAGTGCTGTGTGACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGGTGTAACTCTAACCCAAGCAAGTGAAAGTGCTGTGTGACAAG  400

seq1  ATCTTTGAGTCTTTGAAGAAAAATCAAAAATGAGGAATATTTCAGAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGAGTCTTTGAAGAAAAATCAAAAATGAGGAATATTTCAGAAGAT  450

seq1  ACAGAAGATAGAAAGGTCTACAATACTCATTAATTGATAGGATTAACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGATAGAAAGGTCTACAATACTCATTAATTGATAGGATTAACATA  500

seq1  GGAAAACTGGCCATCTTACCAA  522
      ||||||||||||||||||||||
seq2  GGAAAACTGGCCATCTTACCAA  522

seq1: chr15_60460946_60461254
seq2: B6Ng01-086I12.g_74_382 (reverse)

seq1  CCTCTCCTAACTCCTCCCCAATCCATCACACCCAACTTGGTATCCTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTAACTCCTCCCCAATCCATCACACCCAACTTGGTATCCTGTTT  50

seq1  TGTTTTTAGACCCACGGTGTAAAAATTGTGCTTCCCCACACTCCTGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAGACCCACGGTGTAAAAATTGTGCTTCCCCACACTCCTGGATG  100

seq1  CGTCTCTGTCTTTTCTACATATCCAAGAAGAAGAAATGAACCAAGGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCTGTCTTTTCTACATATCCAAGAAGAAGAAATGAACCAAGGGCCT  150

seq1  CAACATTAAAGAAAACCTACTCTCCCTCTCCCAGAAGCAATCAGCTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTAAAGAAAACCTACTCTCCCTCTCCCAGAAGCAATCAGCTTCTA  200

seq1  AGTGCTCCTTATCTAAGAGGGGAACTTCATGCTTGCCTTCCTTCTTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTCCTTATCTAAGAGGGGAACTTCATGCTTGCCTTCCTTCTTCATA  250

seq1  CTGGAATATTGTGTGGTGTAAGCTTGTGTGGGTCTTATACATGCTGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATATTGTGTGGTGTAAGCTTGTGTGGGTCTTATACATGCTGTCTC  300

seq1  AAGTGCTGA  309
      |||||||||
seq2  AAGTGCTGA  309