BAC Information

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BAC

Clone NameB6Ng01-086M09
Chromosome15 (Build37)
Map Location 57,122,316 - 57,123,171
singlet/doubletsinglet
Overlap geneBC026439
Upstream geneHas2, EG594843, LOC435442, LOC100040067, LOC100039984
Downstream geneZhx2, Derl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086M09.bB6Ng01-086M09.g
ACCDH900081DH900082
length1,285959
definitionDH900081|Mus musculus domesticus DNA, BAC clone: B6Ng01-086M09, 5' end.DH900082|Mus musculus domesticus DNA, BAC clone: B6Ng01-086M09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttggcagaataataatagtaggttttcccttagggcccatgc
cttatctaaccataagttcttatcctcactgacagtaccagatatagatt
ctatctcatgaagtgggccttaaacccaataaaaagatggttgattaatc
cagaacattgtgccactactgcaccagtagacatgtcttggcaggcagat
cattattacagctcatgggattcatagctgggtgactaggacgagtactt
ttctcctctagaagtgtgtacagtacctccgacaactacagatgctagcc
agtatagataaagctcgcaattgagtaccagctagatttctccatgcgct
atgatataatcatgttgcatctttagcagtagagttttatatcatcaagt
tttggagggtaatcagtagcactggcaatagactaatatttgagagatct
gtaggagaatacgaaatcaacagaaaaaaatcactaaccttcctatagta
tatacaaatggcaaacacagtgaagaagaaaacagggaaacaaaccattc
acaacagcctcaacagtactttgcaataactctaactgaggaagtaaaag
acaatggagaaagctatagaaaaagacaccagagatggaaagacctctca
tatgcattaataggattaatattgtgaaaatggccatctgattaaagcag
tctacagattcaacacaatctaaaaattccaacataattctttatggaaa
ttgaaaaaaataatcttaaattttagatcgaaatacaaaaaacccaggat
agcaaaggcaattctgagtaacaagtgaacagaagtattatcatttctgt
atttaagctgtacttctgagctacattgtaataaaaatagcacaccactg
gcactcacacagccacactgatccatgggccagagctgaagatgcagaag
taagtccatgtacctatggacacttaatttcaagagaaaaaaatgtcccg
aaaaacacattggagacagaaagcctcttcacagtgctactggttaaact
ggatagctgcatgtcaagagtgaaccagatcatgtacaaactaaacttca
ataagatcaaggacttcacctagaccgatacttctgaatctggtggcgag
aagtatgatatgctaacttcttgaaacagaaaggcttcaactttcttgga
ccgctcatcacagcttccgagctgtgagtccaaggcatcgatcatacatg
ctacttgaattgaacttgccagccgataccgtgtt
gaattctacagagtaatttagaatgatttttaaatttttattcatatgaa
tctcttgcctatatacatgagtaatttagaatgatttttaaatttttatt
catatgaatctcttgcctatatacatgcatgtgtaccatgtacctgcctg
atgaccactgaggtcggaaaagtacactggatcctatgaaaccagattta
taggtatttcttcacaactatgtgggtactgggaagcgaattggagttca
gtgcaagagaaacaagcctctgtagcttctgatccatcatatataacaag
gaatactatgactaaagatcgttgactctaaatatcttgcattaaaagtt
ttaaattgcttggttccaggactccgcggagggcagtctgcacaggtgag
agtgtggaatacagagactagcagcttctgggacagacgagagcaacaga
gcttctgaggcggtgccattttcggctccagacaatcggccaccttccca
gccagagacaggtatccacccggcctgggaggcttctgctcaggttccgc
agaagccatcttggttccgggactccatggagggcagtctgcacaggtga
gagtgtagaatacagaggctagcagcttctgggacaggtgagagccacag
agcttctgaggcgacattattttcggctccagacaactggccaccttcct
ggccagaggacatgtgaccgcctggcccgggaggcttctgcctcagattc
cgcggaagccatcttggttctgggactccacggagggcagtctacacagg
tgagagtgtggactacagaagctagcagcttctgggacacgcgagagctg
cagagcttctggggcagcaccgttttcgggctcaagacatccgtccacct
tcctggccagaggataggtgtccgcccagcctgggaggcctttgcctcag
gatccacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_57122316_57123171
seq2: B6Ng01-086M09.g_67_922

seq1  GAATTCTACAGAGTAATTTAGAATGATTTTTAAATTTTTATTCATATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGAGTAATTTAGAATGATTTTTAAATTTTTATTCATATGAA  50

seq1  TCTCTTGCCTATATACATGAGTAATTTAGAATGATTTTTAAATTTTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGCCTATATACATGAGTAATTTAGAATGATTTTTAAATTTTTATT  100

seq1  CATATGAATCTCTTGCCTATATACATGCATGTGTACCATGTACCTGCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAATCTCTTGCCTATATACATGCATGTGTACCATGTACCTGCCTG  150

seq1  ATGACCACTGAGGTCGGAAAAGTACACTGGATCCTATGAAACCAGATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCACTGAGGTCGGAAAAGTACACTGGATCCTATGAAACCAGATTTA  200

seq1  TAGGTATTTCTTCACAACTATGTGGGTACTGGGAAGCGAATTGGAGTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATTTCTTCACAACTATGTGGGTACTGGGAAGCGAATTGGAGTTCA  250

seq1  GTGCAAGAGAAACAAGCCTCTGTAGCTTCTGATCCATCATATATAACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAGAGAAACAAGCCTCTGTAGCTTCTGATCCATCATATATAACAAG  300

seq1  GAATACTATGACTAAAGATCGTTGACTCTAAATATCTTGCATTAAAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTATGACTAAAGATCGTTGACTCTAAATATCTTGCATTAAAAGTT  350

seq1  TTAAATTGCTTGGTTCCAGGACTCCGCGGAGGGCAGTCTGCACAGGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTGCTTGGTTCCAGGACTCCGCGGAGGGCAGTCTGCACAGGTGAG  400

seq1  AGTGTGGAATACAGAGACTAGCAGCTTCTGGGACAGACGAGAGCAACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGAATACAGAGACTAGCAGCTTCTGGGACAGACGAGAGCAACAGA  450

seq1  GCTTCTGAGGCGGTGCCATTTTCGGCTCCAGACAATCGGCCACCTTCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGAGGCGGTGCCATTTTCGGCTCCAGACAATCGGCCACCTTCCCA  500

seq1  GCCAGAGACAGGTATCCACCCGGCCTGGGAGGCTTCTGCTCAGGTTCCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGACAGGTATCCACCCGGCCTGGGAGGCTTCTGCTCAGGTTCCGC  550

seq1  AGAAGCCATCTTGGTTCCGGGACTCCATGGAGGGCAGTCTGCACAGGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCATCTTGGTTCCGGGACTCCATGGAGGGCAGTCTGCACAGGTGA  600

seq1  GAGTGTAGAATACAGAGGCTAGCAGCTTCTGGGACAGGTGAGAGCCACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTAGAATACAGAGGCTAGCAGCTTCTGGGACAGGTGAGAGCCACAG  650

seq1  AGCTTCTGAGGCGACATTATTTTCGGCTCCAGACAACTGGCCACCTTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTGAGGCGACATTATTTTCGGCTCCAGACAACTGGCCACCTTCCT  700

seq1  GGCCAGAGGACATGTGACCGCCTGGCCCGGGAGGCTTCTGCCTCAGATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGAGGACATGTGACCGCCTGGCCCGGGAGGCTTCTGCCTCAGATTC  750

seq1  CGCGGAAGCCATCTTGGTTCTGGGACTCCACGGAGGGCAGTCTACACAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGGAAGCCATCTTGGTTCTGGGACTCCACGGAGGGCAGTCTACACAGG  800

seq1  TGAGAGTGTGGACTACAGAAGCTAGCAGCTTCTGGGACACGCGAGAGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTGTGGACTACAGAAGCTAGCAGCTTCTGGGACACGCGAGAGCTG  850

seq1  CAGAGC  856
      ||||||
seq2  CAGAGC  856