BAC Information

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BAC

Clone NameB6Ng01-087G08
Chromosome15 (Build37)
Map Location 89,002,244 - 89,152,586
singlet/doubletdoublet
Overlap genePlxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1
Upstream geneZdhhc25, Brd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11
Downstream geneAdm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3, Acr, Rabl2a, LOC676575, Syt10, Alg10b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087G08.bB6Ng01-087G08.g
ACCDH900532DH900533
length1,102872
definitionDH900532|Mus musculus domesticus DNA, BAC clone: B6Ng01-087G08, 5' end.DH900533|Mus musculus domesticus DNA, BAC clone: B6Ng01-087G08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,002,244 - 89,003,343)(89,151,720 - 89,152,586)
sequence
gaattcacttgcaacctctctgtgcctgggggctgctctagcttcctctg
aggcctcagcttcctccagctccagacttctcaaagcagatcatctaggc
cccagttcccttttgggagtctcctgaaggcagagccaaaggaggctggc
ctcctctaagcaacttgccatacatatttcagaagggtctgatgaacctt
ccactgactaatcggggtccactggccagctattgtcttctctatcagga
tcctctgggctaacacttcttagatgtgaaactaatgtcgccgagaccct
ttagatcaccaccatcttggattgatgttcccaaccagccatctctgtct
cctaggagtgacccccaccccagcccagacaaagaactctgtctcgagtt
gtttgtcttcaagaactcgctactagtaaatttacttcaagagcacacca
ctctggttcaaatccagccctgcctctttctggcagagttacatgggtca
tttacaaagctgctctgtgccattttcccatatgcatgttgggtatgaca
ataatacccacttcagaaggctgggcgactctttatcctcagcatcctgg
ccacagtcacccgtcctctatgatcttctctaggggaattcctgggtggg
actcagggacgaggctgggggcggccaatgggaatgcactgtgaggattg
aggagtctgtgccagcagctcttaggtctgtatcttaacaaacagcctcg
cctcagccagaaatctgagggccagcgggggtctgagtctcttgtacatc
ctggactgcttcgagagcaacaaaagcccctggtcagctggatgccctga
ggccttcttcttttaggttcctcttcttgccctaggctcgatgccgattc
cagggcgatcggatggcggcttgaggggtatgcatgacacagagaccgca
ggcagccagtcttgagttccctaactcctaaaacagcctcatagggcagt
gtcagataagagccgggttcctttcctctcatattttgagtacgaacggt
cttttaaggctcggatcaaatcaaccctgagtaagtgtggtccaacagga
ga
gaattcaacctgaagtcttcctagctctgcctcttgaatagctgggatta
caatcctgcaccaccatcccagcaatcagcctttttttttaacgctaatt
tttattttttcatgctttgatatgtctccttttgacttattttttgttaa
tctttagcatatagaattatggattttattatgacatgttcataaacata
ttgttgggttttgcttgtattcataccataggtccttggttaatctatat
tccagtgatttttttttttcagatttttccacaattaaaacccctaccat
tggaagctcacacacatgcggtatataccaaattgttcttcacaatgatt
gtgccaatccaccatccaccgtggattctgtgacattagttcttaacatc
tttgtcagcctgacaaaactattcaaaacaaaaaaacctatcagaagcac
tttttattttttttctgactgcaggaacatctcttcaactctctgtgttt
cctcttctatttcactatgtccctttgtggggcttccccgggacttggtc
actctgtccttcctgctgaacatacacgggtgctcagtaagcatttgccg
gatgcgtatatacaagtcttcagtgcaaaccatgctgaagatgttacttt
accctctgagaaaaatattagcagagtcacccaattgcttgttcttatca
gttgtgggaagggtggtttcgtcagacttacagaagagcagtgtgctaaa
gcatggttggtgcacaccagcatcaggaaacagaggtaggattgttagtt
agttttaagaccagtctggggctacatagcaaaacccctgctcctcttcc
ccccaacccagtaccccccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_89002244_89003343
seq2: B6Ng01-087G08.b_45_1146

seq1  GAATTCACTTGCAACCTCTCTGTGCCTGGGGGCTGCTCTAGCTTCCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGCAACCTCTCTGTGCCTGGGGGCTGCTCTAGCTTCCTCTG  50

seq1  AGGCCTCAGCTTCCTCCAGCTCCAGACTTCTCAAAGCAGATCATCTAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCAGCTTCCTCCAGCTCCAGACTTCTCAAAGCAGATCATCTAGGC  100

seq1  CCCAGTTCCCTTTTGGGAGTCTCCTGAAGGCAGAGCCAAAGGAGGCTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTCCCTTTTGGGAGTCTCCTGAAGGCAGAGCCAAAGGAGGCTGGC  150

seq1  CTCCTCTAAGCAACTTGCCATACATATTTCAGAAGGGTCTGATGAACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTAAGCAACTTGCCATACATATTTCAGAAGGGTCTGATGAACCTT  200

seq1  CCACTGACTAATCGGGGTCCACTGGCCAGCTATTGTCTTCTCTATCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGACTAATCGGGGTCCACTGGCCAGCTATTGTCTTCTCTATCAGGA  250

seq1  TCCTCTGGGCTAACACTTCTTAGATGTGAAACTAATGTCGCCGAGACCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGGGCTAACACTTCTTAGATGTGAAACTAATGTCGCCGAGACCCT  300

seq1  TTAGATCACCACCATCTTGGATTGATGTTCCCAACCAGCCATCTCTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATCACCACCATCTTGGATTGATGTTCCCAACCAGCCATCTCTGTCT  350

seq1  CCTAGGAGTGACCCCCACCCCAGCCCAGACAAAGAACTCTGTCTCGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGAGTGACCCCCACCCCAGCCCAGACAAAGAACTCTGTCTCGAGTT  400

seq1  GTTTGTCTTCAAGAACTCGCTACTAGTAAATTTACTTCAAGAGCACACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCTTCAAGAACTCGCTACTAGTAAATTTACTTCAAGAGCACACCA  450

seq1  CTCTGGTTCAAATCCAGCCCTGCCTCTTTCTGGCAGAGTTACATGGGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTTCAAATCCAGCCCTGCCTCTTTCTGGCAGAGTTACATGGGTCA  500

seq1  TTTACAAAGCTGCTCTGTGCCATTTTCCCATATGCATGTTGGGTATGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAGCTGCTCTGTGCCATTTTCCCATATGCATGTTGGGTATGACA  550

seq1  ATAATACCCACTTCAGAAGGCTGGGCGACTCTTTATCCTCAGCATCCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACCCACTTCAGAAGGCTGGGCGACTCTTTATCCTCAGCATCCTGG  600

seq1  CCACAGTCACCCGTCCTCTATGATCTTCTCTAGGGGAATTCCTGGGTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTCACCCGTCCTCTATGATCTTCTCTAGGGGAATTCCTGGGTGGG  650

seq1  ACTCAGGGACGAGGCTGGGGGCGGCCAATGGGAATGCACTGTGAGGATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGGACGAGGCTGGGGGCGGCCAATGGGAATGCACTGTGAGGATTG  700

seq1  AGGAGTCTGTGCCAGCAGCTCTTAGGTCTGTATCTTAACAAACAGCCTCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTCTGTGCCAGCAGCTCTTAGGTCTGTATCTTAACAAACAGCCTCG  750

seq1  CCTCAGCCAGAAATCTGAGGGCCAGCGGGGGTCTGAGTCTCTTGTACATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCCAGAAATCTGAGGGCCAGCGGGGGTCTGAGTCTCTTGTACATC  800

seq1  CTGGACTGCTTCGAGAGCAACAAAAGCCCCTGGTCAGCTGGATGCCCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTGCTTCGAGAGCAACAAAAGCCCCTGGTCAGCTGGATGCCCTGA  850

seq1  GGCCTTCTTC-TTTAGGTTCCTCTTCTTGCCCTAGGCTCGATGCCGATTC  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCTTCTTTTAGGTTCCTCTTCTTGCCCTAGGCTCGATGCCGATTC  900

seq1  CAGGGCGATCGGATGGCGGCTTGAGGGGTATGCATGACACAGAGACCGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCGATCGGATGGCGGCTTGAGGGGTATGCATGACACAGAGACCGCA  950

seq1  GGCAGCCAGTC-TGAGTTCCCTAACT-CTAAAACAGCCTCATAGGGCAGT  997
      ||||||||||| |||||||||||||| |||||||||||||||||||||||
seq2  GGCAGCCAGTCTTGAGTTCCCTAACTCCTAAAACAGCCTCATAGGGCAGT  1000

seq1  GTCAGAT-AGAGCCGGGGTTCCTTTCCTCTCAATATTCTGAGTACGAACG  1046
      ||||||| |||||| |||||||||||||||| ||||| ||||||||||||
seq2  GTCAGATAAGAGCC-GGGTTCCTTTCCTCTC-ATATTTTGAGTACGAACG  1048

seq1  GCTTTTTAAGGCTCAGATCAAATCAACCCTGAGGTAGTGTGGTCCAACAG  1096
      |  ||||||||||| ||||||||||||||||||  |||||||||||||||
seq2  GTCTTTTAAGGCTCGGATCAAATCAACCCTGAGTAAGTGTGGTCCAACAG  1098

seq1  GAGA  1100
      ||||
seq2  GAGA  1102

seq1: chr15_89151720_89152586
seq2: B6Ng01-087G08.g_69_940 (reverse)

seq1  GGGGGGGGGTACGGGGTTGGGGGG-AGAGGAGCA-GGGTTTTGCTATGTA  48
      |||||||||||| ||||||||||| ||||||||| |||||||||||||||
seq2  GGGGGGGGGTACTGGGTTGGGGGGAAGAGGAGCAGGGGTTTTGCTATGTA  50

seq1  G-CCCAGACTGGTCTTAAAACTAACTAACAATCCTACCTCTGTTTCCTGA  97
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGACTGGTCTTAAAACTAACTAACAATCCTACCTCTGTTTCCTGA  100

seq1  TGCTGGTGTGCACC-ACCATGC-TTAGCACACTGCTCTTCTGTAAGTCTG  145
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  TGCTGGTGTGCACCAACCATGCTTTAGCACACTGCTCTTCTGTAAGTCTG  150

seq1  ACGAAACCACCCTTCCCACAACTGATAAGAACAAGCAATTGGGTGACTCT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAACCACCCTTCCCACAACTGATAAGAACAAGCAATTGGGTGACTCT  200

seq1  GCTAATATTTTTCTCAGAGGGTAAAGTAACATCTTCAGCATGGTTTGCAC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATATTTTTCTCAGAGGGTAAAGTAACATCTTCAGCATGGTTTGCAC  250

seq1  TGAAGACTTGTATATACGCATCCGGCAAATGCTTACTGAGCACCCGTGTA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACTTGTATATACGCATCCGGCAAATGCTTACTGAGCACCCGTGTA  300

seq1  TGTTCAGCAGGAAGGACAGAGTGACCAAGTCCCGGGGAAGCCCCACAAAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGCAGGAAGGACAGAGTGACCAAGTCCCGGGGAAGCCCCACAAAG  350

seq1  GGACATAGTGAAATAGAAGAGGAAACACAGAGAGTTGAAGAGATGTTCCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATAGTGAAATAGAAGAGGAAACACAGAGAGTTGAAGAGATGTTCCT  400

seq1  GCAGTCAGAAAAAAAATAAAAAGTGCTTCTGATAGGTTTTTTTGTTTTGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAGAAAAAAAATAAAAAGTGCTTCTGATAGGTTTTTTTGTTTTGA  450

seq1  ATAGTTTTGTCAGGCTGACAAAGATGTTAAGAACTAATGTCACAGAATCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTGTCAGGCTGACAAAGATGTTAAGAACTAATGTCACAGAATCC  500

seq1  ACGGTGGATGGTGGATTGGCACAATCATTGTGAAGAACAATTTGGTATAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTGGATGGTGGATTGGCACAATCATTGTGAAGAACAATTTGGTATAT  550

seq1  ACCGCATGTGTGTGAGCTTCCAATGGTAGGGGTTTTAATTGTGGAAAAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCATGTGTGTGAGCTTCCAATGGTAGGGGTTTTAATTGTGGAAAAAT  600

seq1  CTGAAAAAAAAAAATCACTGGAATATAGATTAACCAAGGACCTATGGTAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAAAAAAAATCACTGGAATATAGATTAACCAAGGACCTATGGTAT  650

seq1  GAATACAAGCAAAACCCAACAATATGTTTATGAACATGTCATAATAAAAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACAAGCAAAACCCAACAATATGTTTATGAACATGTCATAATAAAAT  700

seq1  CCATAATTCTATATGCTAAAGATTAACAAAAAATAAGTCAAAAGGAGACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATTCTATATGCTAAAGATTAACAAAAAATAAGTCAAAAGGAGACA  750

seq1  TATCAAAGCATGAAAAAATAAAAATTAGCGTTAAAAAAAAAGGCTGATTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAGCATGAAAAAATAAAAATTAGCGTTAAAAAAAAAGGCTGATTG  800

seq1  CTGGGATGGTGGTGCAGGATTGTAATCCCAGCTATTCAAGAGGCAGAGCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATGGTGGTGCAGGATTGTAATCCCAGCTATTCAAGAGGCAGAGCT  850

seq1  AGGAAGACTTCAGGTTGAATTC  867
      ||||||||||||||||||||||
seq2  AGGAAGACTTCAGGTTGAATTC  872