BAC Information

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BAC

Clone NameB6Ng01-087K14
Chromosome15 (Build37)
Map Location 29,901,828 - 29,903,023
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC382975, Ctnnd2, 9630009A06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087K14.bB6Ng01-087K14.g
ACCDH900726DH900727
length1,1601,179
definitionDH900726|Mus musculus domesticus DNA, BAC clone: B6Ng01-087K14, 5' end.DH900727|Mus musculus domesticus DNA, BAC clone: B6Ng01-087K14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatcacatggccccca
atgaaggagctagagaaagtaccaaagaagctaaagggatctgcacccta
tagtggaacaacattatgactaccagtaccccggagctcttgactctagc
tgctatgcatcaaagaatgcctagtcggcatcactgaaggagccatgaaa
ctgcactttatatgccagtacagggacgcaggcataatgaattgtgtgct
atgcgaaagg
gaattcagctaaaacaatcctttgcaaaagtttgaggtgataagcaatac
tggcaaggctatctaaggattagatctcacagttgataactatatacttc
cttatcttaacaatggaaatcaatctcaaaagtaatcacagaggtacctt
ctcctgaagtatatcttcttcatctggtaatttgagtatatggaatcata
attatatagtgctatttaatgatttaattttcagaaatatttgctacttc
taaaagttatgagttttgctatatttttctctccaccttacacaacaggc
aacatgatatagctcagacactctggccatagctagtgtgagatgagctt
catagatctggccactaggaagaacaatgaagtctgtagaaagtgaacaa
cgacaatcccagggggaaattcaggctgacttgagttgagttctggcata
ttctgaacatgacatgaagcaagaaaggcagatgtagattgatttgaagc
cagaagagaggaagagaagttttattcctgtaaatattgttatgggttct
gactcatgtgagcaatatactttccctctcctcttccttattaaaaacca
ctgatcatctagtctgagtagacatctccctgagtcacttcttatagttg
cccttgttgaagtaaaaatatacctttcctgggttttgtttgttattgtt
tttgaggtttttgtggtcttcatttttgttttgttttgtttgttttcgat
gagaacttatatagttttaaattttattttctttttggtttgtttctttt
catatatctcgaccacaaatttccctccctccacatctgctagctctgcc
taccctagatccaaacctccttgttttccctttagaacagagcagcctcc
agggatttagccaaatatggcacacaaaatcaaataagcagaggcacaaa
ccctcatatcaaggctggacggggcaaaccagtagagacaatgttcagaa
aaggctaaatagtcagaaacctccccacaccctaccctctctgttaggat
gtcataagaacaatctaaacaccatatgtgtattcagtgagactacttgc
aaccatgtaggtcatgatggtcctttcagtcctgtggagactctgagcct
gctttagttgatctggggtcaattcttcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_29901828_29903023
seq2: B6Ng01-087K14.g_67_1245

seq1  GAATTCAGCTAAAACAATCCTTTGCAAAAGTTTGAGGTGATAAGCAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTAAAACAATCCTTTGCAAAAGTTTGAGGTGATAAGCAATAC  50

seq1  TGGCAAGGCTATCTAAGGATTAGATCTCACAGTTGATAACTATATACTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGGCTATCTAAGGATTAGATCTCACAGTTGATAACTATATACTTC  100

seq1  CTTATCTTAACAATGGAAATCAATCTCAAAAGTAATCACAGAGGTACCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTTAACAATGGAAATCAATCTCAAAAGTAATCACAGAGGTACCTT  150

seq1  CTCCTGAAGTATATCTTCTTCATCTGGTAATTTGAGTATATGGAATCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAAGTATATCTTCTTCATCTGGTAATTTGAGTATATGGAATCATA  200

seq1  ATTATATAGTGCTATTTAATGATTTAATTTTCAGAAATATTTGCTACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATAGTGCTATTTAATGATTTAATTTTCAGAAATATTTGCTACTTC  250

seq1  TAAAAGTTATGAGTTTTGCTATATTTTTCTCTCCACCTTACACAACAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTATGAGTTTTGCTATATTTTTCTCTCCACCTTACACAACAGGC  300

seq1  AACATGATATAGCTCAGACACTCTGGCCATAGCTAGTGTGAGATGAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATATAGCTCAGACACTCTGGCCATAGCTAGTGTGAGATGAGCTT  350

seq1  CATAGATCTGGCCACTAGGAAGAACAATGAAGTCTGTAGAAAGTGAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATCTGGCCACTAGGAAGAACAATGAAGTCTGTAGAAAGTGAACAA  400

seq1  CGACAATCCCAGGGGGAAATTCAGGCTGACTTGAGTTGAGTTCTGGCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACAATCCCAGGGGGAAATTCAGGCTGACTTGAGTTGAGTTCTGGCATA  450

seq1  TTCTGAACATGACATGAAGCAAGAAAGGCAGATGTAGATTGATTTGAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAACATGACATGAAGCAAGAAAGGCAGATGTAGATTGATTTGAAGC  500

seq1  CAGAAGAGAGGAAGAGAAGTTTTATTCCTGTAAATATTGTTATGGGTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGAGGAAGAGAAGTTTTATTCCTGTAAATATTGTTATGGGTTCT  550

seq1  GACTCATGTGAGCAATATACTTTCCCTCTCCTCTTCCTTATTAAAAACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATGTGAGCAATATACTTTCCCTCTCCTCTTCCTTATTAAAAACCA  600

seq1  CTGATCATCTAGTCTGAGTAGACATCTCCCTGAGTCACTTCTTATAGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCATCTAGTCTGAGTAGACATCTCCCTGAGTCACTTCTTATAGTTG  650

seq1  CCCTTGTTGAAGTAAAAATATACCTTTCCTGGGTTTTGTTTGTTATTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTTGAAGTAAAAATATACCTTTCCTGGGTTTTGTTTGTTATTGTT  700

seq1  TTTGAGGTTTTTGTGGTCTTCATTTTTGTTTTGTTTTGTTTGTTTTCGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGTTTTTGTGGTCTTCATTTTTGTTTTGTTTTGTTTGTTTTCGAT  750

seq1  GAGAACTTATATAGTTTTAAATTTTATTTTCTTTTTGGTTTGTTTCTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTTATATAGTTTTAAATTTTATTTTCTTTTTGGTTTGTTTCTTTT  800

seq1  CATATATCTCGACCACAAATTTCCCTCCCTCCACATCTGCTAGCTCTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATCTCGACCACAAATTTCCCTCCCTCCACATCTGCTAGCTCTGCC  850

seq1  TACCCTAGATCCAAACCTCCTTGTTTTCCCTTTAGAACAGAGCAGGCCTC  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TACCCTAGATCCAAACCTCCTTGTTTTCCCTTTAGAACAGAGCA-GCCTC  899

seq1  CAGGGATATTAGCCAAATATGGCACAACAAAATCAAATAAGCAGAGGCAC  950
      ||||||| ||||||||||||||||| ||||||||||||||||||||||||
seq2  CAGGGAT-TTAGCCAAATATGGCAC-ACAAAATCAAATAAGCAGAGGCAC  947

seq1  AAACCCTCATATCAAGGCTGGACGGGGCAAACCAGTAGGAGGACAAATGT  1000
      ||||||||||||||||||||||||||||||||||||||   ||| |||||
seq2  AAACCCTCATATCAAGGCTGGACGGGGCAAACCAGTAG--AGAC-AATGT  994

seq1  TCCAGAAAAAGGCTAAATAGTCAGAAACCTCCCCACACCCTACCCTCTCT  1050
      | ||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  T-CAG-AAAAGGCTAAATAGTCAGAAACCTCCCCACACCCTACCCTCTCT  1042

seq1  GTTAGGAATGTCATAAGAACAATCTAAACAACCATAATGTGTATTCAGTG  1100
      |||||| |||||||||||||||||||||| ||||| ||||||||||||||
seq2  GTTAGG-ATGTCATAAGAACAATCTAAAC-ACCAT-ATGTGTATTCAGTG  1089

seq1  AGACTAC-TGCAAACCCATGTAGGGTCCATGATTGTCCTTTCAGTCTCTG  1149
      ||||||| |||||  |||||||||   |||||| |||||||||||| |||
seq2  AGACTACTTGCAA--CCATGTAGG--TCATGATGGTCCTTTCAGTC-CTG  1134

seq1  T-GAGACTCTGAGCCCTGC-TTAGTTGATTCTGTGGGTCACATTCTTCG  1196
      | ||||||||||| ||||| |||||||| |||| |||||| ||||||||
seq2  TGGAGACTCTGAG-CCTGCTTTAGTTGA-TCTG-GGGTCA-ATTCTTCG  1179