BAC Information

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BAC

Clone NameB6Ng01-088E04
Chromosome15 (Build37)
Map Location 81,364,756 - 81,557,244
singlet/doubletdoublet
Overlap geneEp300, L3mbtl2, Rangap1
Upstream geneEnthd1, Grap2, AW544981, Tnrc6b, Adsl, LOC625672, Rutbc3, Mkl1, LOC675966, Mchr1, Slc25a17, St13, Xpnpep3, Dnajb7, Rbx1, EG383080
Downstream geneZc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik, BC018285, Cyp2d13, LOC380998, LOC627860, LOC676200
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088E04.bB6Ng01-088E04.g
ACCDH901166DH901167
length1,0031,126
definitionDH901166|Mus musculus domesticus DNA, BAC clone: B6Ng01-088E04, 5' end.DH901167|Mus musculus domesticus DNA, BAC clone: B6Ng01-088E04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,556,230 - 81,557,244)(81,364,756 - 81,365,578)
sequence
gaattcaagccagccagagatacacattgagaccctgtatatgaatgaat
gcatgaatgaagttgtttgttggggtttaaggtatagttaaatgtgagaa
gtctggggtaccatccccagtacatacccacacatacacctgtcctttac
aataaaccagtaaataactttacttaaaaaaacaaaaaacctgttttccc
tgagttctgtgagttctagcaaattaattgaccccatggggagagtcatg
acaaccctagtttctaaccagtagatcagaagcacaggtaaacacactgg
ggttcgtggatgtggggtagcgttgtagactgggctctcagttcctggga
tcccagtgtccaaactgaattggaggctcgagcagtgccctgcagtagtt
agttgcttgcttgatgtggtcgctgttagaagtgtgccgtgaaacacatt
ggagaagctgggatgttttccacacacagatctattgtgatggcgggcgg
ctcttgtgatgtaggtacttctggtctcctaggaacctctgaggggccac
tgtggcaagtgcagtctctggccaggattgaaaccgacatgcagtggcct
tagccttgtgtgcctcccctagtcatgccagcatgggcagtggggtgttc
cttgggatggatgacctggatcccatagccatctgtagcctgtttgagga
gtgggaccctcagacagagcgctgccaagatgatccgccaggtgcgtgac
tctcggggcagccgtgcttggggcttgactgccctgcactgggtgtccct
gctggggcagtttggagaggggcttgcaagacttgagctctctgccacct
ttccagactgtagttttctaatgacatattattcatttatttctctgggg
ggtagctcttgggttcttcccagggcagatgggggcgattcccagccttg
actagaaactcagggaccctccacacacctttgagtatcctgggattatc
aaa
gaattcactatgtagaccaagctacctttgatctcagctccactggtctc
tgcctcccgaccgctgagattaaaggccttagttgcagtttccttcaaaa
ttttggagggaagtgctttaagaaaggaagtaaacaacttaaaatagctt
caggaagtccctaaaactgacccgaggaccttgcctcctaagagtttata
agcagtaaagactgctgggatacaccaaacagacctcctgagctgcttcc
aaaaggcacagcctaagccatgtggagagtaactgagatgcccaaaacac
tggatcttaacctgagggttgagactcctttggggaatgttaaacaatcc
tttcacacatatttaagattcattaacagttgaaacattacaggtatgaa
gtaacaaataattttctgggcagaggtcactgtaacatgagggaccatat
taaagggttgcagcgttaggaaggctgggaatcactggcctctaagatct
gcctgaggagctactcagagcccgagccattgggaagggacacacactgt
agagctgcttacaggttgtccagtgtgcttcaaccagctttcgtgagctg
tcacttgtgccgaggagggatttggtgcagctgtctgagtcatttctcgt
tctggaactaacccctcacccgtattcctggaagtaacccctcaaaaaaa
aaccaaaaacaaaacctcaccaagttggaccttggtagtatgagcgcttt
attctgctggtggtttcatatctggggtgagtagatgttcacgttcccag
aaactgtttcacaacagccaccacacccacctggctccttcttctaagac
aaggtaccatgtaacctaacctggccttgaactcttgatcctcctgcctc
catctcctgggtgctaacagcacaagtcactaaagcagccgctgtgggtt
ctactcttttttttttctttcttttctttttttttagagacaaggttcct
ctgattagcttggcttgtcctggaactcactactcacttgtagaccagct
gccttgaactcagaaatccgctgctctgcctcccgagggctgcataaaga
atgtgacttaccacctaccctctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_81556230_81557244
seq2: B6Ng01-088E04.b_47_1049 (reverse)

seq1  TTTGATATCCCAAGGATAACCTCAAAGTGTGTGTGGAGTGTCCCCTGAGT  50
      |||||||  || ||||||  ||||||| |||||||||| || ||||||||
seq2  TTTGATAATCCCAGGATA--CTCAAAG-GTGTGTGGAGGGT-CCCTGAGT  46

seq1  TCTCTAGTCAGGGCTGTGGATTCGCCCCCTTCCTGCCATGGAGAAGAACC  100
      | |||||||| ||||| ||| |||||||| | ||||| ||| ||||||||
seq2  T-TCTAGTCAAGGCTG-GGAATCGCCCCCAT-CTGCCCTGG-GAAGAACC  92

seq1  CAAGAGCTAACCCACCAAGAGAAATAAATGAATAAATATGTCATTAGAAA  150
      |||||||||  || || |||||||||||||||| ||||||||||||||||
seq2  CAAGAGCTA--CCCCCCAGAGAAATAAATGAAT-AATATGTCATTAGAAA  139

seq1  ACTAACAGTCTGGAAAGGTGGCAGAGAGCTCAAGTCCTGCAAGCCCCTCT  200
      ||| |||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACT-ACAGTCTGGAAAGGTGGCAGAGAGCTCAAGTCTTGCAAGCCCCTCT  188

seq1  CCAAACTGCCCCAGCAGGGACACCCAGTGCAGGGCAGTCAAGCCCCAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTGCCCCAGCAGGGACACCCAGTGCAGGGCAGTCAAGCCCCAAGC  238

seq1  ACGGCTGCCCCGAGAGTCACGCACCTGGCGGATCATCTTGGCAGCGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTGCCCCGAGAGTCACGCACCTGGCGGATCATCTTGGCAGCGCTCT  288

seq1  GTCTGAGGGTCCCACTCCTCAAACAGGCTACAGATGGCTATGGGATCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGGGTCCCACTCCTCAAACAGGCTACAGATGGCTATGGGATCCAG  338

seq1  GTCATCCATCCCAAGGAACACCCCACTGCCCATGCTGGCATGACTAGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCATCCCAAGGAACACCCCACTGCCCATGCTGGCATGACTAGGGG  388

seq1  AGGCACACAAGGCTAAGGCCACTGCATGTCGGTTTCAATCCTGGCCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACACAAGGCTAAGGCCACTGCATGTCGGTTTCAATCCTGGCCAGAG  438

seq1  ACTGCACTTGCCACAGTGGCCCCTCAGAGGTTCCTAGGAGACCAGAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACTTGCCACAGTGGCCCCTCAGAGGTTCCTAGGAGACCAGAAGTA  488

seq1  CCTACATCACAAGAGCCGCCCGCCATCACAATAGATCTGTGTGTGGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATCACAAGAGCCGCCCGCCATCACAATAGATCTGTGTGTGGAAAA  538

seq1  CATCCCAGCTTCTCCAATGTGTTTCACGGCACACTTCTAACAGCGACCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCAGCTTCTCCAATGTGTTTCACGGCACACTTCTAACAGCGACCAC  588

seq1  ATCAAGCAAGCAACTAACTACTGCAGGGCACTGCTCGAGCCTCCAATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCAAGCAACTAACTACTGCAGGGCACTGCTCGAGCCTCCAATTCA  638

seq1  GTTTGGACACTGGGATCCCAGGAACTGAGAGCCCAGTCTACAACGCTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGACACTGGGATCCCAGGAACTGAGAGCCCAGTCTACAACGCTACC  688

seq1  CCACATCCACGAACCCCAGTGTGTTTACCTGTGCTTCTGATCTACTGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCCACGAACCCCAGTGTGTTTACCTGTGCTTCTGATCTACTGGTT  738

seq1  AGAAACTAGGGTTGTCATGACTCTCCCCATGGGGTCAATTAATTTGCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTAGGGTTGTCATGACTCTCCCCATGGGGTCAATTAATTTGCTAG  788

seq1  AACTCACAGAACTCAGGGAAAACAGGTTTTTTGTTTTTTTAAGTAAAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACAGAACTCAGGGAAAACAGGTTTTTTGTTTTTTTAAGTAAAGTT  838

seq1  ATTTACTGGTTTATTGTAAAGGACAGGTGTATGTGTGGGTATGTACTGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTGGTTTATTGTAAAGGACAGGTGTATGTGTGGGTATGTACTGGG  888

seq1  GATGGTACCCCAGACTTCTCACATTTAACTATACCTTAAACCCCAACAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTACCCCAGACTTCTCACATTTAACTATACCTTAAACCCCAACAAA  938

seq1  CAACTTCATTCATGCATTCATTCATATACAGGGTCTCAATGTGTATCTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCATTCATGCATTCATTCATATACAGGGTCTCAATGTGTATCTCT  988

seq1  GGCTGGCTTGAATTC  1015
      |||||||||||||||
seq2  GGCTGGCTTGAATTC  1003

seq1: chr15_81364756_81365578
seq2: B6Ng01-088E04.g_386_1194

seq1  GTTGAGACTCCTTTGGGGAATGTTAAACAATCCTTTCACACATATTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGACTCCTTTGGGGAATGTTAAACAATCCTTTCACACATATTTAAG  50

seq1  ATTCATTAACAGTTGAAACATTACAGGTATGAAGTAACAAATAATTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTAACAGTTGAAACATTACAGGTATGAAGTAACAAATAATTTTCT  100

seq1  GGGCAGAGGTCACTGTAACATGAGGGACCATATTAAAGGGTTGCAGCGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAGGTCACTGTAACATGAGGGACCATATTAAAGGGTTGCAGCGTT  150

seq1  AGGAAGGCTGGGAATCACTGGCCTCTAAGATCTGCCTGAGGAGCTACTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGCTGGGAATCACTGGCCTCTAAGATCTGCCTGAGGAGCTACTCA  200

seq1  GAGCCCGAGCCATTGGGAAGGGACACACACTGTAGAGCTGCTTACAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCGAGCCATTGGGAAGGGACACACACTGTAGAGCTGCTTACAGGTT  250

seq1  GTCCAGTGTGCTTCAACCAGCTTTCGTGAGCTGTCACTTGTGCCGAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTGTGCTTCAACCAGCTTTCGTGAGCTGTCACTTGTGCCGAGGAG  300

seq1  GGATTTGGTGCAGCTGTCTGAGTCATTTCTCGTTCTGGAACTAACCCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGGTGCAGCTGTCTGAGTCATTTCTCGTTCTGGAACTAACCCCTC  350

seq1  ACCCGTATTCCTGGAAGTAACCCCTCAAAAAAAAACCAAAAACAAAACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGTATTCCTGGAAGTAACCCCTCAAAAAAAAACCAAAAACAAAACCT  400

seq1  CACCAAGTTGGACCTTGGTAGTATGAGCGCTTTATTCTGCTGGTGGTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGTTGGACCTTGGTAGTATGAGCGCTTTATTCTGCTGGTGGTTTC  450

seq1  ATATCTGGGGTGAGTAGATGTTCACGTTCCCAGAAACTGTTTCACAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGGGGTGAGTAGATGTTCACGTTCCCAGAAACTGTTTCACAACAG  500

seq1  CCACCACACCCACCTGGCTCCTTCTTCTAAGACAAGGTACCATGTAACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACACCCACCTGGCTCCTTCTTCTAAGACAAGGTACCATGTAACCT  550

seq1  AACCTGGCCTTGAACTCTTGATCCTCCTGCCTCCATCTCCTGGGTGCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGCCTTGAACTCTTGATCCTCCTGCCTCCATCTCCTGGGTGCTAA  600

seq1  CAGGCACAAGTCACTAAAGCAGCCGCTGTGGGTTCTAACTCTTTTTTTTT  650
      || ||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  CA-GCACAAGTCACTAAAGCAGCCGCTGTGGGTTCT-ACTC-TTTTTTTT  647

seq1  TTCTTTCTTTTCTTTTTTTTTTCAGAGACAGGGTTTCTCTGTATAGCCTT  700
      |||||||||||||||||||||  ||||||| |||| |||||  ||| |||
seq2  TTCTTTCTTTTCTTTTTTTTT--AGAGACAAGGTTCCTCTGATTAG-CTT  694

seq1  GGC-TGTCCTGGAACTCACTTACTCACTTTGTAGACCAGGCTGGCCTTGA  749
      ||| ||||||||||||||| ||||||| |||||||||| ||| |||||||
seq2  GGCTTGTCCTGGAACTCAC-TACTCAC-TTGTAGACCA-GCT-GCCTTGA  740

seq1  ACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGCATTAAAGGTAT  799
      ||||||||||||| ||| |||||||||||||| ||| ||||  || | ||
seq2  ACTCAGAAATCCG-CTG-CTCTGCCTCCCGAGGGCT-GCAT--AAAGAAT  785

seq1  GTGACTTTACCACCTA-CCTCTTTT  823
      ||||| |||||||||| ||||||||
seq2  GTGAC-TTACCACCTACCCTCTTTT  809