BAC Information

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BAC

Clone NameB6Ng01-089G02
Chromosome15 (Build37)7 (Build37)
Map Location 5,765,850 - 5,766,97919,455,845 - 19,456,428
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039214, 4930455B06Rik, C7, Card6, Rpl37, LOC100039281, Prkaa1, Ttc33, Ptger4, LOC100039322, LOC100039308, LOC666291
Downstream geneLOC666319, LOC100039358, LOC666323, Dab2, C9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik, Osmr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089G02.bB6Ng01-089G02.g
ACCDH901974DH901975
length1,1251,097
definitionDH901974|Mus musculus domesticus DNA, BAC clone: B6Ng01-089G02, 5' end.DH901975|Mus musculus domesticus DNA, BAC clone: B6Ng01-089G02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(5,765,850 - 5,766,979)(19,455,845 - 19,456,428)
sequence
gaattccttcatattctagactgttctatgcttggactacaatagtgtta
atacagactcacttatttccttctcaaccttatcaaatacataggtgtat
gggtttaatatattgcaggtgaaataactcaattacactaacatgcattg
atagattatctatgtattatatttgaggtccaaggggtgcaaagcatttt
ttccaagttaccaacagtttcttccaattttaatctctggtagtgaaagg
tactttgatgtccaaaaccttcatcacccaatcaaaaatgttactcacga
gtgctagtgcattaaggttgtgggatagtgtaatcactcagcatgaaaac
aagaactgacacaaattcaaagtatgattttataagtgtcattcatgccc
tagatcacaaagggcagtttaactaaaggacctgtgcatagctcacatct
ccaaagcacttaacttaatgaccatctggccatctttattgctgtgttgt
aaccataaaacatatacaccctgatgatgtttggaaaaaaatcacaaaac
actctaaggatttattgctgtgtggttatttttaaatttatgtatttcgt
gttaatattcccaacatctgggtgccttctcatggttaaaatagaataga
aattcttgatacgtttgcacctgtgaatggatgagtcagatattcctggg
tttgtttctaaagttagcacacgcttgctctcagcctagtactggggcac
tatgtgcaattctttcttctgacactctcttgtctgatacataaagcaca
tattaggaggatcagccacacgtgtgactctttctgtggtattttccatt
atagatcatgaacatatttacattatacaattcgtcagaaaaaaaataac
attatctagatattttttcagagtgattaaaaacaaaatgcccctttcct
acaagttttgcttaatttcttttacagctgatggaggctaaagttggaag
gaaattggtcaccaatttatttcgaacattcagggcacttgccatcatca
gagatctggatctttctataaaaaggtgctaactcaaggttagataggac
ctacattgatgggtttgtatttgtt
gaattccacacagtattgcttctgaccaaggaactcatttcacagccaga
gaagtacgacagtgggcccacgatcatggaatacactggtcttaccacat
tccccatcatcctgaagcagctgggctgatagaaagatggaatggccttt
tgaagacgcagttacagcgccaattaggtggtaacagcttggaaggctgg
ggcagagttcttcagaaggcagtatatgctttgaatcagcgctcgatata
tggtacagtttcacccatagccaggattcatgggtccaggaatcaagggg
tggaaaaaggaatagttccacttactatcactcctagtgaccctctagga
aaatttttgcttcctgtccccataactctaggttctgctggcctagaagt
tttggctccagagaggggagtgcttctaccaggagctacaacaaacattc
cattgaactggaagctcagacttccccctggtcattttgggcttctaatg
cccttaaaccaacaggctaaaaaaggaataacagtgttaggaggggtgat
agatccagattaccatggagaaattggattacctcttcacaatggtggta
agcaagattatgtctggagtgtaggagaccccttagggcgtctcttagta
ctaccatgtcctgtgattaaagtcaatgggaaactacaacagcctaatcc
aagcaggatgacaaagaatgcagacccatcaggaatgaaggtatgggtca
atcctccaggaaaagagccaagacctgctgaggtgctgggttgaaggaga
agtaaatacagaatgggtagtagaggaaggtaggttattaataccaatta
agggccacgtaaccagttgcagaaaacgaggattataaagtaatatgaat
gcccattgtaaatttactaatgcgttgcgattgtacgagggatagttata
tcatgttaaggcatatttacaaccttgttattgtttcatgtgaacatgag
atatatttggtgtcaagttgacaaggggtggaattgtagtccgctattcc
tgtgtaacttgacaataattgggatgaactacatccggaattggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_5765850_5766979
seq2: B6Ng01-089G02.b_47_1171 (reverse)

seq1  AACAAATAAACAAACCATCAATGTTTTGTTTCTTAATCTAAACCCTGAGT  50
      |||||||| | || |||||||||  | | | ||  |||| |||| |||||
seq2  AACAAATACA-AACCCATCAATG--TAGGTCCT--ATCT-AACCTTGAGT  44

seq1  AGCCAC--TTTTATAGAAAGATCCCAGA--TCTGATGATGGCAAGTGCCC  96
         |||  |||||||||||||| |||||  ||||||||||||||||||||
seq2  TAGCACCTTTTTATAGAAAGAT-CCAGATCTCTGATGATGGCAAGTGCCC  93

seq1  TGAATGTTCGAAATAAA-TGGTGACAATTTCCCTTCCAACTTTAAGCCTC  145
      ||||||||||||||||| ||||||| | || |||||||||||| ||||||
seq2  TGAATGTTCGAAATAAATTGGTGACCAATTTCCTTCCAACTTT-AGCCTC  142

seq1  CATTCAGCTGTAAAAGAAAATTAAGCAAAACTTGTAGGAAAGGGGCCTTT  195
      || ||||||||||||| ||||||||||||||||||||||||||||| |||
seq2  CA-TCAGCTGTAAAAG-AAATTAAGCAAAACTTGTAGGAAAGGGGCATTT  190

seq1  TGTTTTTTAATCACTCTG-AAAAATATCTAGATAATGTTATTTTTTTTCT  244
      || ||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TG-TTTTTAATCACTCTGAAAAAATATCTAGATAATGTTATTTTTTTTCT  239

seq1  GACGAATTGTATAATGTAAATATGTTCATGATCTATAATGGAAAATACCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGAATTGTATAATGTAAATATGTTCATGATCTATAATGGAAAATACCA  289

seq1  CAGAAAGAGTCACACGTGTGGCTGATCCTCCTAATATGTGCTTTATGTAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAGTCACACGTGTGGCTGATCCTCCTAATATGTGCTTTATGTAT  339

seq1  CAGACAAGAGAGTGTCAGAAGAAAGAATTGCACATAGTGCCCCAGTACTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAGAGAGTGTCAGAAGAAAGAATTGCACATAGTGCCCCAGTACTA  389

seq1  GGCTGAGAGCAAGCGTGTGCTAACTTTAGAAACAAACCCAGGAATATCTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGAGCAAGCGTGTGCTAACTTTAGAAACAAACCCAGGAATATCTG  439

seq1  ACTCATCCATTCACAGGTGCAAACGTATCAAGAATTTCTATTCTATTTTA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCCATTCACAGGTGCAAACGTATCAAGAATTTCTATTCTATTTTA  489

seq1  ACCATGAGAAGGCACCCAGATGTTGGGAATATTAACACGAAATACATAAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGAGAAGGCACCCAGATGTTGGGAATATTAACACGAAATACATAAA  539

seq1  TTTAAAAATAACCACACAGCAATAAATCCTTAGAGTGTTTTGTGATTTTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATAACCACACAGCAATAAATCCTTAGAGTGTTTTGTGATTTTT  589

seq1  TTCCAAACATCATCAGGGTGTATATGTTTTATGGTTACAACACAGCAATA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAACATCATCAGGGTGTATATGTTTTATGGTTACAACACAGCAATA  639

seq1  AAGATGGCCAGATGGTCATTAAGTTAAGTGCTTTGGAGATGTGAGCTATG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGCCAGATGGTCATTAAGTTAAGTGCTTTGGAGATGTGAGCTATG  689

seq1  CACAGGTCCTTTAGTTAAACTGCCCTTTGTGATCTAGGGCATGAATGACA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTCCTTTAGTTAAACTGCCCTTTGTGATCTAGGGCATGAATGACA  739

seq1  CTTATAAAATCATACTTTGAATTTGTGTCAGTTCTTGTTTTCATGCTGAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAAATCATACTTTGAATTTGTGTCAGTTCTTGTTTTCATGCTGAG  789

seq1  TGATTACACTATCCCACAACCTTAATGCACTAGCACTCGTGAGTAACATT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACACTATCCCACAACCTTAATGCACTAGCACTCGTGAGTAACATT  839

seq1  TTTGATTGGGTGATGAAGGTTTTGGACATCAAAGTACCTTTCACTACCAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTGGGTGATGAAGGTTTTGGACATCAAAGTACCTTTCACTACCAG  889

seq1  AGATTAAAATTGGAAGAAACTGTTGGTAACTTGGAAAAAATGCTTTGCAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAAATTGGAAGAAACTGTTGGTAACTTGGAAAAAATGCTTTGCAC  939

seq1  CCCTTGGACCTCAAATATAATACATAGATAATCTATCAATGCATGTTAGT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGACCTCAAATATAATACATAGATAATCTATCAATGCATGTTAGT  989

seq1  GTAATTGAGTTATTTCACCTGCAATATATTAAACCCATACACCTATGTAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGAGTTATTTCACCTGCAATATATTAAACCCATACACCTATGTAT  1039

seq1  TTGATAAGGTTGAGAAGGAAATAAGTGAGTCTGTATTAACACTATTGTAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAGGTTGAGAAGGAAATAAGTGAGTCTGTATTAACACTATTGTAG  1089

seq1  TCCAAGCATAGAACAGTCTAGAATATGAAGGAATTC  1130
      ||||||||||||||||||||||||||||||||||||
seq2  TCCAAGCATAGAACAGTCTAGAATATGAAGGAATTC  1125

seq1: chr7_19455845_19456428
seq2: B6Ng01-089G02.g_581_1166

seq1  ACAGGCTAAAAAAGGAATAACAGTGTTAGGAGGGGTGATAGATCCAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTAAAAAAGGAATAACAGTGTTAGGAGGGGTGATAGATCCAGATT  50

seq1  ACCATGGGGAAATTGGATTACCTCTTCACAATGGTGGTAAGCAAGATTAT  100
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGAGAAATTGGATTACCTCTTCACAATGGTGGTAAGCAAGATTAT  100

seq1  GTCTGGAGTGCAGGAGATCCCTTAGGGCGTCTCTTAGTACTACCATGTCC  150
      |||||||||| |||||| ||||||||||||||||||||||||||||||||
seq2  GTCTGGAGTGTAGGAGACCCCTTAGGGCGTCTCTTAGTACTACCATGTCC  150

seq1  TGTGATTAAAGTCAATGGGAAACTACAACAGCCTAATCCAAGCAGGATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTAAAGTCAATGGGAAACTACAACAGCCTAATCCAAGCAGGATGA  200

seq1  CAAAGGACGCAGACCCATCAGGAATGAAGGTATGGGTCAATCCTCCAGGA  250
      ||||| | ||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAATGCAGACCCATCAGGAATGAAGGTATGGGTCAATCCTCCAGGA  250

seq1  AAAGAGCCAAGACCTGCTGAGGTGCT-GGCTGAAGGTGAAGGAAATACAG  299
      |||||||||||||||||||||||||| || |||||| |||| ||||||||
seq2  AAAGAGCCAAGACCTGCTGAGGTGCTGGGTTGAAGGAGAAGTAAATACAG  300

seq1  AATGGGTAGTAGAGGAAGGTA-GTTATAAATACCAATTAA-GGCCACGTA  347
      ||||||||||||||||||||| ||||| |||||||||||| |||||||||
seq2  AATGGGTAGTAGAGGAAGGTAGGTTATTAATACCAATTAAGGGCCACGTA  350

seq1  ACCAGTTGCAG-AAACGAGGATTATAAAGTAATATGAATGCCCATTGTAA  396
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTGCAGAAAACGAGGATTATAAAGTAATATGAATGCCCATTGTAA  400

seq1  ATTTACTAATGCGTTTGCGATTGTACGAGGGATAGTTATATCATGTT-AG  445
      ||||||||||||| ||||||||||||||||||||||||||||||||| ||
seq2  ATTTACTAATGCG-TTGCGATTGTACGAGGGATAGTTATATCATGTTAAG  449

seq1  GCGTATTTACAACCTTGTTATTGTTTCATGTGAACATGAGATATTATTTG  495
      || |||||||||||||||||||||||||||||||||||||||||  || |
seq2  GCATATTTACAACCTTGTTATTGTTTCATGTGAACATGAGATATATTTGG  499

seq1  TGTCAAGTTGACAAGGGGTGG-ATTGTAGT-GGCTATTCCTGGTTGTCAA  543
      ||||||||||||||||||||| ||||||||  ||||||||||  ||| ||
seq2  TGTCAAGTTGACAAGGGGTGGAATTGTAGTCCGCTATTCCTG--TGT-AA  546

seq1  CTTGACAATATTTGGAATGAACTACAATCCGGAATTGGAAG  584
      |||||||||| |||| ||||||||| |||||||||||||||
seq2  CTTGACAATAATTGGGATGAACTAC-ATCCGGAATTGGAAG  586