BAC Information

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BAC

Clone NameB6Ng01-091D20
Chromosome15 (Build37)
Map Location 76,729,942 - 76,807,144
singlet/doubletdoublet
Overlap geneCommd5, Rpl8, Zfp647, 1110038F14Rik
Upstream geneEef1d, Tigd5, Pycrl, Tsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina, Spatc1, LOC100041269, Oplah, Exosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5, Bop1, Scx, Hsf1, Dgat1, Scrt1, LOC666497, EG666504, Fbxl6, Gpr172b, Adck5, Cpsf1, Slc39a4, Vps28, Nfkbil2, Cyhr1, Kifc2, Foxh1, Ppp1r16a, Gpt1, Mfsd3, Recql4, Lrrc14, Lrrc24, C030006K11Rik, D15Wsu169e, Zfp251, Zfp7
Downstream geneMb, Apol6, Rbm9, LOC100042318, Apol3, BC020489, BC085284, LOC624454, EG666639, 9030421J09Rik, EG626615, 2210421G13Rik, 9130218O11Rik, LOC666661, A330102K04Rik, EG545115, LOC666348, LOC666679, 2310016F22Rik, Apol2, Myh9, Txn2, Foxred2, Eif3s7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091D20.bB6Ng01-091D20.g
ACCDH903321DH903322
length1,0971,059
definitionDH903321|Mus musculus domesticus DNA, BAC clone: B6Ng01-091D20, 5' end.DH903322|Mus musculus domesticus DNA, BAC clone: B6Ng01-091D20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,729,942 - 76,731,042)(76,806,081 - 76,807,144)
sequence
gaattctgtttggtttattgaaattgtttgggtttgtttgtttgtttgtt
tgagacagggtatgtagcgctgcctgtgctggaactctgtgtagacccga
ctgaccttgaactgtttctgcctcctagtgctcggattaaaagacgtggg
ccgccgcctagaccatctaagtattttaaaatatgcaattcgttggcatc
aaccacaataattcttacgtctgttcttcacatggggctgcacaggccag
cagaatccatgcatcccacacggaagctaactgaactttcctctcgcttc
ccaaaacactgttagaaggcaagcgaccgggcggcgcatgcgctcggctc
ccgggaccacagagagccacggtcgcgctttcctagagcggcccggaagt
gtctaagtggcacttcctgagactcggccaagtttcagctgctgccagcc
acagccagctcctgcggatagcttcctccaggtgcagagggcgttcaagg
cttagtttgtatttgtaatgtgtgatttaggtcttccagagctatgatga
ggattcagggtttgggggggtcctcgttccctatttatgtaggattttgg
tgcgcgcttcagtttcttggttcttttccctgccaactgttaaatctccg
ggacgcctcccttctgctagactcaggcgggctcctttgccgcaaggtct
cagggccacctccaaagcatgcatcctatttgctatctatccttggtaga
caggcgggtgggagcccctcatccacccccagtttttagtacatgaagct
cccgagtaggaagtcacttgtctctccttcacctctccaggctactgtgg
ttagtaccttctctccggcctggtcaagaaagggaaaggaaggatgtctg
cgttgggggctgcggcttccatacttacaccatccaactgacagtcacag
cggccgggtcagttttctgggttcccagccctctgcagaagtgacggcag
tggtcagctcttgaggacttagacaggagccacttcagaaagttgttgaa
actctagtcgggccctcaatgggaagactgcagagagccggtgcagc
gaattcttgagccccgggaggtagtcatgttcagattcgctggctggtct
ctttggacattgaatcagtccaatggaaggtgaatatggctggcacattg
gcaccacaggatagagaaaggatccttaaggcccaggattgtatagacct
ggaggtctagtgggaggaggctgagcgaagaatatagatttggaacaata
ggaagaatagttcaagtctacttatttacctctcagagagcctggactgg
ctgatataatctgaggtccctgatttatggacaggcaggaaaggcaaatt
ccaagacaactagcaagaggtgagactgttagtgtctaacagccgcttga
tatagggagcaatttccagccttttggttcatgggatattgccagaccct
ttacaggggtagctatagccaagagacttacaactggtgggtgatgtgct
gccaagcctggagattctcaacccataccccaggacactggtgggtgatg
tgctgcaagtcctggagcagggctgctgggtctggctttgtgtctgctgt
ggagtctgggggagctagaagatgttcttcagacagacggacagttaaac
tgagttggcagtaggtgcaaaggaaagtttagtttcttgaggagtaaaga
tggcggtggtgttgggtacaaaaacccaaaacagcacaagcagtcacaag
aggccagcaaagcaagttctttatcttaattaggcagcaaaaactgacca
attagggacaacatcacagactcaggagcctgactacatctaagaacatt
tgccgtagtgtttaagcagattacaaaaatctattgtactccggctggct
ctgattgatcggggccgaagaacagactcatgccgctggttggtttaggg
taacttgcttaacattcacggcttaccttgccaaccaggacgttagttac
ccacacacatgtctttcttagccaagcaagttactcaggagtcttaggaa
cttacattttaattcatctctgttcaaatggaagttgtatcaaatggttt
ccatttgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_76729942_76731042
seq2: B6Ng01-091D20.b_47_1143

seq1  GAATTCTGTTTGGTTTATTGAAATTGTTTGGGTTTGTTTGTTTGTTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTGGTTTATTGAAATTGTTTGGGTTTGTTTGTTTGTTTGTT  50

seq1  TGAGACAGGGTATGTAGCGCTGCCTGTGCTGGAACTCTGTGTAGACCCGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGGGTATGTAGCGCTGCCTGTGCTGGAACTCTGTGTAGACCCGA  100

seq1  CTGACCTTGAACTGTTTCTGCCTCCTAGTGCTCGGATTAAAAGACGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTTGAACTGTTTCTGCCTCCTAGTGCTCGGATTAAAAGACGTGGG  150

seq1  CCGCCGCCTAGACCATCTAAGTATTTTAAAATATGCAATTCGTTGGCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCGCCTAGACCATCTAAGTATTTTAAAATATGCAATTCGTTGGCATC  200

seq1  AACCACAATAATTCTTACGTCTGTTCTTCACATGGGGCTGCACAGGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAATAATTCTTACGTCTGTTCTTCACATGGGGCTGCACAGGCCAG  250

seq1  CAGAATCCATGCATCCCACACGGAAGCTAACTGAACTTTCCTCTCGCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCCATGCATCCCACACGGAAGCTAACTGAACTTTCCTCTCGCTTC  300

seq1  CCAAAACACTGTTAGAAGGCAAGCGACCGGGCGGCGCATGCGCTCGGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACACTGTTAGAAGGCAAGCGACCGGGCGGCGCATGCGCTCGGCTC  350

seq1  CCGGGACCACAGAGAGCCACGGTCGCGCTTTCCTAGAGCGGCCCGGAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGACCACAGAGAGCCACGGTCGCGCTTTCCTAGAGCGGCCCGGAAGT  400

seq1  GTCTAAGTGGCACTTCCTGAGACTCGGCCAAGTTTCAGCTGCTGCCAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGTGGCACTTCCTGAGACTCGGCCAAGTTTCAGCTGCTGCCAGCC  450

seq1  ACAGCCAGCTCCTGCGGATAGCTTCCTCCAGGTGCAGAGGGCGTTCAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCAGCTCCTGCGGATAGCTTCCTCCAGGTGCAGAGGGCGTTCAAGG  500

seq1  CTTAGTTTGTATTTGTAATGTGTGATTTAGGTCTTCCAGAGCTATGATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTTGTATTTGTAATGTGTGATTTAGGTCTTCCAGAGCTATGATGA  550

seq1  GGATTCAGGGTTTGGGGGGGTCCTCGTTCCCTATTTATGTAGGATTTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAGGGTTTGGGGGGGTCCTCGTTCCCTATTTATGTAGGATTTTGG  600

seq1  TGCGCGCTTCAGTTTCTTGGTTCTTTTCCCTGCCAACTGTTAAATCTCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCGCTTCAGTTTCTTGGTTCTTTTCCCTGCCAACTGTTAAATCTCCG  650

seq1  GGACGCCTCCCTTCTGCTAGACTCAGGCGGGCTCCTTTGCCGCAAGGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGCCTCCCTTCTGCTAGACTCAGGCGGGCTCCTTTGCCGCAAGGTCT  700

seq1  CAGGGCCACCTCCAAAGCATGCATCCTATTTGCTATCTATCCTTGGTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCACCTCCAAAGCATGCATCCTATTTGCTATCTATCCTTGGTAGA  750

seq1  CAGGCGGGTGGGAGCCCCTCATCCACCCCCAGTTTTTAGTACATGAAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCGGGTGGGAGCCCCTCATCCACCCCCAGTTTTTAGTACATGAAGCT  800

seq1  CCCGAGTAGGAAGTCACTTGTCTCTCCTTCACCTCTCCAGGCTACTGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGTAGGAAGTCACTTGTCTCTCCTTCACCTCTCCAGGCTACTGTGG  850

seq1  TTAGTACCTTCTCTCCGGCCTGGTCAAGAAAGGGAAAGGAAGGATGTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACCTTCTCTCCGGCCTGGTCAAGAAAGGGAAAGGAAGGATGTCTG  900

seq1  CGTTGGGGGCTGCGGC-TCCATACTTACACCATCCAACTGACAGTCACAG  949
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CGTTGGGGGCTGCGGCTTCCATACTTACACCATCCAACTGACAGTCACAG  950

seq1  CGGCCGGGTCAGTTTCCTGGGTTCCCAGCCCTCTGCAGAAGTGACGGCAG  999
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CGGCCGGGTCAGTTTTCTGGGTTCCCAGCCCTCTGCAGAAGTGACGGCAG  1000

seq1  TGGCCCAGCTCTTGAAGGACTTAGACAGGAGCACCTTCAGAAAGTTGTTG  1049
      |||  ||||||||| |||||||||||||||||  ||||||||||||||||
seq2  TGG-TCAGCTCTTG-AGGACTTAGACAGGAGCCACTTCAGAAAGTTGTTG  1048

seq1  AAACTCGTAGTCGGGGCCCTCCATGGGAAAGACTGCAGAGAGGCCGTGCA  1099
      |||||| ||||| |||||||| ||||| |||||||||||||| | |||||
seq2  AAACTC-TAGTC-GGGCCCTCAATGGG-AAGACTGCAGAGAGCCGGTGCA  1095

seq1  GC  1101
      ||
seq2  GC  1097

seq1: chr15_76806081_76807144
seq2: B6Ng01-091D20.g_67_1125 (reverse)

seq1  TCCAAATGGAAACCATTTTGAATACAACTTCCATTTTGAACAGAGATGAA  50
      ||||||||||||||||||   |||||||||||| ||||||||||||||||
seq2  TCCAAATGGAAACCATTT--GATACAACTTCCA-TTTGAACAGAGATGAA  47

seq1  ATAAAATGTAAGTTCCTAAGACCTCCCTGGGTAACTTGCTTGGCTAAGAA  100
       |||||||||||||||||||||   |||| ||||||||||||||||||||
seq2  TTAAAATGTAAGTTCCTAAGAC--TCCTGAGTAACTTGCTTGGCTAAGAA  95

seq1  AGACATGTGTGTGGGTAACTAACGTCCTGGTTGGCAAGGTAAGCCGTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGTGTGTGGGTAACTAACGTCCTGGTTGGCAAGGTAAGCCGTGAA  145

seq1  TGTTAAGCAAGTTACCCTAAACCAACCAGCGGCATGAGTCTGTTCTTCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGCAAGTTACCCTAAACCAACCAGCGGCATGAGTCTGTTCTTCGG  195

seq1  CCCCGATCAATCAGAGCCAGCCGGAGTACAATAGATTTTTGTAATCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGATCAATCAGAGCCAGCCGGAGTACAATAGATTTTTGTAATCTGCT  245

seq1  TAAACACTACGGCAAATGTTCTTAGATGTAGTCAGGCTCCTGAGTCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACTACGGCAAATGTTCTTAGATGTAGTCAGGCTCCTGAGTCTGTG  295

seq1  ATGTTGTCCCTAATTGGTCAGTTTTTGCTGCCTAATTAAGATAAAGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTCCCTAATTGGTCAGTTTTTGCTGCCTAATTAAGATAAAGAACT  345

seq1  TGCTTTGCTGGCCTCTTGTGACTGCTTGTGCTGTTTTGGGTTTTTGTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGCTGGCCTCTTGTGACTGCTTGTGCTGTTTTGGGTTTTTGTACC  395

seq1  CAACACCACCGCCATCTTTACTCCTCAAGAAACTAAACTTTCCTTTGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCACCGCCATCTTTACTCCTCAAGAAACTAAACTTTCCTTTGCAC  445

seq1  CTACTGCCAACTCAGTTTAACTGTCCGTCTGTCTGAAGAACATCTTCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCCAACTCAGTTTAACTGTCCGTCTGTCTGAAGAACATCTTCTAG  495

seq1  CTCCCCCAGACTCCACAGCAGACACAAAGCCAGACCCAGCAGCCCTGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCAGACTCCACAGCAGACACAAAGCCAGACCCAGCAGCCCTGCTC  545

seq1  CAGGACTTGCAGCACATCACCCACCAGTGTCCTGGGGTATGGGTTGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTTGCAGCACATCACCCACCAGTGTCCTGGGGTATGGGTTGAGAA  595

seq1  TCTCCAGGCTTGGCAGCACATCACCCACCAGTTGTAAGTCTCTTGGCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGGCTTGGCAGCACATCACCCACCAGTTGTAAGTCTCTTGGCTAT  645

seq1  AGCTACCCCTGTAAAGGGTCTGGCAATATCCCATGAACCAAAAGGCTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACCCCTGTAAAGGGTCTGGCAATATCCCATGAACCAAAAGGCTGGA  695

seq1  AATTGCTCCCTATATCAAGCGGCTGTTAGACACTAACAGTCTCACCTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTCCCTATATCAAGCGGCTGTTAGACACTAACAGTCTCACCTCTT  745

seq1  GCTAGTTGTCTTGGAATTTGCCTTTCCTGCCTGTCCATAAATCAGGGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTTGTCTTGGAATTTGCCTTTCCTGCCTGTCCATAAATCAGGGACC  795

seq1  TCAGATTATATCAGCCAGTCCAGGCTCTCTGAGAGGTAAATAAGTAGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTATATCAGCCAGTCCAGGCTCTCTGAGAGGTAAATAAGTAGACT  845

seq1  TGAACTATTCTTCCTATTGTTCCAAATCTATATTCTTCGCTCAGCCTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTATTCTTCCTATTGTTCCAAATCTATATTCTTCGCTCAGCCTCCT  895

seq1  CCCACTAGACCTCCAGGTCTATACAATCCTGGGCCTTAAGGATCCTTTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTAGACCTCCAGGTCTATACAATCCTGGGCCTTAAGGATCCTTTCT  945

seq1  CTATCCTGTGGTGCCAATGTGCCAGCCATATTCACCTTCCATTGGACTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTGTGGTGCCAATGTGCCAGCCATATTCACCTTCCATTGGACTGA  995

seq1  TTCAATGTCCAAAGAGACCAGCCAGCGAATCTGAACATGACTACCTCCCG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTCCAAAGAGACCAGCCAGCGAATCTGAACATGACTACCTCCCG  1045

seq1  GGGCTCAAGAATTC  1064
      ||||||||||||||
seq2  GGGCTCAAGAATTC  1059