BAC Information

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BAC

Clone NameB6Ng01-092E02
Chromosome15 (Build37)
Map Location 100,006,849 - 100,170,417
singlet/doubletdoublet
Overlap geneDip2b, Atf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057
Upstream geneSpats2, Kcnh3, Mcrs1, EG545136, Prpf40b, Fmnl3, Tegt, C230021P08Rik, 4930556P03Rik, Faim2, LOC545137, Aqp2, Aqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481, LOC100042918, 1700030F18Rik, Gm920, D330037H05Rik, 4930478M13Rik
Downstream geneLOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2, Pou6f1, Dazap2, BC004728, Bin2, Ela1, Galnt6, Slc4a8, Scn8a, EG668225, Ankrd33, Acvrl1, Acvr1b, Grasp, Nr4a1, 9430023L20Rik, 6030408B16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092E02.bB6Ng01-092E02.g
ACCDH904066DH904067
length249780
definitionDH904066|Mus musculus domesticus DNA, BAC clone: B6Ng01-092E02, 5' end.DH904067|Mus musculus domesticus DNA, BAC clone: B6Ng01-092E02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,006,849 - 100,007,097)(100,169,643 - 100,170,417)
sequence
cattccattcggaggagctgacctggttactgtagagcgaactaagctgt
tactataataactctagtcacaaaggaggcagggcagagagctgcccagt
ctgacagcccagtgacctgagctcagcccccagatggggcaagtggaggg
ctgactgctgcatgttgtcctgtgttctttctctcagtaggcactgtgcc
atgcaggtacgcacagagagagtgacggtggatatgggtgggtgggtgg
gaattcccatctgttctgtgcagttctgtgatgacgctggtgtgtaaagt
gcacttatacgagctgtggagtgcaggacagtgcagcagccagtggcaaa
accctcagtcgaaggacagagagccactggccagagcacaggtggcagcc
aaagcagactagtaacaccaggacagcaagtgggttctgattccttctta
ccaggatgggggagggaaggaggtgttcctgtgttagtcagccgtggatt
ttcgattttctgggatttatttattcggtttgcaagctgtaagtctcccc
cactgcttccttttcaaaggcctatgagagaccttcggtccctttggagg
gagagttcaaagctgctctgatttggttttgattcggtaagaaacaacat
agaaaatggctaaacagaaacctgtagggatgaatttgattttcacccct
cccagtgagaattttacatctaaaacggaagcctggaaccagcgtggagc
agaccggatctctcccaccacctcactctatttcacagcatagccataga
tgtggggccgcaccaaggtcaaggggagcggggcctggatgtgctgcagg
ttcagctttggagaagttggcctgctctatggccttccagctctctctgg
tcagattgcatccgtcaaaagcaagggaaccacacacgagccaggacctg
ctgccagaaattatttccaggtagacccgttcatctgccacatggtctat
gaagtaaaaagcccctccctggagaagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_100006849_100007097
seq2: B6Ng01-092E02.b_52_300

seq1  CATTCCATTCGGAGGAGCTGACCTGGTTACTGTAGAGCGAACTAAGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCATTCGGAGGAGCTGACCTGGTTACTGTAGAGCGAACTAAGCTGT  50

seq1  TACTATAATAACTCTAGTCACAAAGGAGGCAGGGCAGAGAGCTGCCCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATAATAACTCTAGTCACAAAGGAGGCAGGGCAGAGAGCTGCCCAGT  100

seq1  CTGACAGCCCAGTGACCTGAGCTCAGCCCCCAGATGGGGCAAGTGGAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGCCCAGTGACCTGAGCTCAGCCCCCAGATGGGGCAAGTGGAGGG  150

seq1  CTGACTGCTGCATGTTGTCCTGTGTTCTTTCTCTCAGTAGGCACTGTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGCTGCATGTTGTCCTGTGTTCTTTCTCTCAGTAGGCACTGTGCC  200

seq1  ATGCAGGTACGCACAGAGAGAGTGACGGTGGATATGGGTGGGTGGGTGG  249
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGTACGCACAGAGAGAGTGACGGTGGATATGGGTGGGTGGGTGG  249

seq1: chr15_100169643_100170417
seq2: B6Ng01-092E02.g_69_848 (reverse)

seq1  TTTCTTCT-CAGGGAGGGGCTTTTTACTTCATAGACCATGTGGCAGATGA  49
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTCCAGGGAGGGGCTTTTTACTTCATAGACCATGTGGCAGATGA  50

seq1  AC-GGTCTACCTGG-AATTACTTCTGGCAGCAGGTCCTGGCTCGTGTGTG  97
      || ||||||||||| ||| | |||||||||||||||||||||||||||||
seq2  ACGGGTCTACCTGGAAATAATTTCTGGCAGCAGGTCCTGGCTCGTGTGTG  100

seq1  GTT-CCTTGCTTTTGACGGATGCAATCTGACCAGAGAGAGCTGGAAGGCC  146
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCTTGCTTTTGACGGATGCAATCTGACCAGAGAGAGCTGGAAGGCC  150

seq1  ATAGAGCAGGCCAACTTCTCC-AAGCTGAACCTGCAGCACATCCAGGCCC  195
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATAGAGCAGGCCAACTTCTCCAAAGCTGAACCTGCAGCACATCCAGGCCC  200

seq1  CGCTCCCCTTGACCTTGGTGCGGCCCCACATCTATGGCTATGCTGTGAAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCCCCTTGACCTTGGTGCGGCCCCACATCTATGGCTATGCTGTGAAA  250

seq1  TAGAGTGAGGTGGTGGGAGAGATCCGGTCTGCTCCACGCTGGTTCCAGGC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTGAGGTGGTGGGAGAGATCCGGTCTGCTCCACGCTGGTTCCAGGC  300

seq1  TTCCGTTTTAGATGTAAAATTCTCACTGGGAGGGGTGAAAATCAAATTCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTTTTAGATGTAAAATTCTCACTGGGAGGGGTGAAAATCAAATTCA  350

seq1  TCCCTACAGGTTTCTGTTTAGCCATTTTCTATGTTGTTTCTTACCGAATC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACAGGTTTCTGTTTAGCCATTTTCTATGTTGTTTCTTACCGAATC  400

seq1  AAAACCAAATCAGAGCAGCTTTGAACTCTCCCTCCAAAGGGACCGAAGGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAATCAGAGCAGCTTTGAACTCTCCCTCCAAAGGGACCGAAGGT  450

seq1  CTCTCATAGGCCTTTGAAAAGGAAGCAGTGGGGGAGACTTACAGCTTGCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATAGGCCTTTGAAAAGGAAGCAGTGGGGGAGACTTACAGCTTGCA  500

seq1  AACCGAATAAATAAATCCCAGAAAATCGAAAATCCACGGCTGACTAACAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGAATAAATAAATCCCAGAAAATCGAAAATCCACGGCTGACTAACAC  550

seq1  AGGAACACCTCCTTCCCTCCCCCATCCTGGTAAGAAGGAATCAGAACCCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACACCTCCTTCCCTCCCCCATCCTGGTAAGAAGGAATCAGAACCCA  600

seq1  CTTGCTGTCCTGGTGTTACTAGTCTGCTTTGGCTGCCACCTGTGCTCTGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGTCCTGGTGTTACTAGTCTGCTTTGGCTGCCACCTGTGCTCTGG  650

seq1  CCAGTGGCTCTCTGTCCTTCGACTGAGGGTTTTGCCACTGGCTGCTGCAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGCTCTCTGTCCTTCGACTGAGGGTTTTGCCACTGGCTGCTGCAC  700

seq1  TGTCCTGCACTCCACAGCTCGTATAAGTGCACTTTACACACCAGCGTCAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGCACTCCACAGCTCGTATAAGTGCACTTTACACACCAGCGTCAT  750

seq1  CACAGAACTGCACAGAACAGATGGGAATTC  775
      ||||||||||||||||||||||||||||||
seq2  CACAGAACTGCACAGAACAGATGGGAATTC  780