BAC Information

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BAC

Clone NameB6Ng01-092H22
Chromosome15 (Build37)3 (Build37)
Map Location 33,745,546 - 33,746,069109,790,755 - 109,790,906
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSdc2, Pgcp, 1700084J12Rik, Tspyl5
Downstream geneLOC675463, Mtdh, Laptm4b, Matn2, Rpl30, BC030476, Hrsp12, Pop1, Npal2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092H22.bB6Ng01-092H22.g
ACCDH904244DH904245
length1,0201,030
definitionDH904244|Mus musculus domesticus DNA, BAC clone: B6Ng01-092H22, 5' end.DH904245|Mus musculus domesticus DNA, BAC clone: B6Ng01-092H22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(33,745,546 - 33,746,069)(109,790,755 - 109,790,906)
sequence
gaattcagaactcttcagctggggaacggtggtaatgaagtgttcccgca
acacagactgttgagaaggattcaactgcgtgaattcagaactcttcagc
tggggaacagggtacccgtaagtatagctttacaaggtaagtctggtttt
gaactttctaacgaaattcaagacagtctatcagaagtaaagtgggaaat
agctttacaaggtaagtctggccttgaactttctaacgaaattcaagaca
gtctatcagaagtaaagtgggaaatagctttacaaggtatgtttggcctt
gaactttctctagtgttaggagcctttttgttccttttcacatgttatca
agtggttaagatagggctgaaaattctggatgaaattcagggcaatctat
cagaagtaaagcggggagagagagtaggagcaaagaggaaatatggtgca
caaaataagtatacaggcctttccacgggtcttgaacctgaggaaaagtt
aaggtcaggtaagaatacctggggagagattagaaggaaggaaaagaaaa
aaagaaaagaaaaaagatcaattagcggaggtctctaggagaaggagcct
atactcatcactaggtgagctcaaggagccagttcttaatagttctgaat
cagatgaaaaggctattagggcctggaaggcgctctcccgagcaggtgag
gccactggacaactaacaaagatcgtccagagaccacaggagtcattctc
agattttgtggccagaatgacagaggcagcagagcgtatttttggagatt
cagagcaagccgcacctttggtagaatagctcatttatgagcaagccacg
caagaatgcagagcggccatagccccaagaaagaacaaaggtttacaaga
ctggctcaggtttgtcgggagcttgggggacctctcattatgcgttactt
ctattcagtatgagaaatttactagggcagctaatttgtcaaaaagtctt
tctcagtatatgtacagaat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggtgaggatgtggagaaaggggaacactcctccattgttggtg
gggttgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactactggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaactggtaagaagaacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggtatcatcctgagtgaagtaacccaatcacaaag
gtactcgcacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaacttgccaaacgcatgaaattcaag
aagaatgaagaccaaagtgtggacactctacccttccttagaaatgggaa
caaaacacccatagaaggagttacagagacaaaatttggagctgtgacga
aaggatggaccatctagtgattgccatatgcagggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttgctgaaa
ggacccagatatagctctctcttatgagactatgccggggtctagcaaac
acagaagtggatgatcacagtcagctattggatgggtcacacggcctctt
atggaggagctagagaaattactcatggagctaaagggaactgcaaccct
ataggtggaacaacaatatgaactaaccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_33745546_33746069
seq2: B6Ng01-092H22.b_46_569 (reverse)

seq1  CCCCAGGTATTCTTACCTGACCTTAACTTTTCCTCAGGTTCAAGACCCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGTATTCTTACCTGACCTTAACTTTTCCTCAGGTTCAAGACCCGT  50

seq1  GGAAAGGCCTGTATACTTATTTTGTGCACCATATTTCCTCTTTGCTCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGCCTGTATACTTATTTTGTGCACCATATTTCCTCTTTGCTCCTA  100

seq1  CTCTCTCTCCCCGCTTTACTTCTGATAGATTGCCCTGAATTTCATCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCCCCGCTTTACTTCTGATAGATTGCCCTGAATTTCATCCAGA  150

seq1  ATTTTCAGCCCTATCTTAACCACTTGATAACATGTGAAAAGGAACAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGCCCTATCTTAACCACTTGATAACATGTGAAAAGGAACAAAAA  200

seq1  GGCTCCTAACACTAGAGAAAGTTCAAGGCCAAACATACCTTGTAAAGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTAACACTAGAGAAAGTTCAAGGCCAAACATACCTTGTAAAGCTA  250

seq1  TTTCCCACTTTACTTCTGATAGACTGTCTTGAATTTCGTTAGAAAGTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCACTTTACTTCTGATAGACTGTCTTGAATTTCGTTAGAAAGTTCA  300

seq1  AGGCCAGACTTACCTTGTAAAGCTATTTCCCACTTTACTTCTGATAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGACTTACCTTGTAAAGCTATTTCCCACTTTACTTCTGATAGACT  350

seq1  GTCTTGAATTTCGTTAGAAAGTTCAAAACCAGACTTACCTTGTAAAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAATTTCGTTAGAAAGTTCAAAACCAGACTTACCTTGTAAAGCTA  400

seq1  TACTTACGGGTACCCTGTTCCCCAGCTGAAGAGTTCTGAATTCACGCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACGGGTACCCTGTTCCCCAGCTGAAGAGTTCTGAATTCACGCAGT  450

seq1  TGAATCCTTCTCAACAGTCTGTGTTGCGGGAACACTTCATTACCACCGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCTTCTCAACAGTCTGTGTTGCGGGAACACTTCATTACCACCGTT  500

seq1  CCCCAGCTGAAGAGTTCTGAATTC  524
      ||||||||||||||||||||||||
seq2  CCCCAGCTGAAGAGTTCTGAATTC  524

seq1: chr3_109790755_109790906
seq2: B6Ng01-092H22.g_947_1098 (reverse)

seq1  CTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGTTCCCTTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGTTCCCTTTAG  50

seq1  CTCCTTGGGTAATTTTTCTAGCTCCTCCATTAGGGGCCTTGTGACCCATC  100
      |||| || ||||||| |||||||||||||| || |||| |||||||||||
seq2  CTCCATGAGTAATTTCTCTAGCTCCTCCATAAGAGGCCGTGTGACCCATC  100

seq1  CAATAGTTGACTGTGATCATCCACTTCTGTGTTTGCTAGGCCCTGGCATA  150
      |||||| |||||||||||||||||||||||||||||||| ||| ||||||
seq2  CAATAGCTGACTGTGATCATCCACTTCTGTGTTTGCTAGACCCCGGCATA  150

seq1  GT  152
      ||
seq2  GT  152