BAC Information

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BAC

Clone NameB6Ng01-092M04
Chromosome15 (Build37)
Map Location 22,108,256 - 22,108,996
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh12, LOC100040351
Downstream geneEG545091, Cdh18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092M04.bB6Ng01-092M04.g
ACCDH904431DH904432
length1,229993
definitionDH904431|Mus musculus domesticus DNA, BAC clone: B6Ng01-092M04, 5' end.DH904432|Mus musculus domesticus DNA, BAC clone: B6Ng01-092M04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgaattctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttaccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtcaattcttgatcttacagcacaagccattgctgtt
ctattcaggaattttttccctgtgcctatatcttcaaggcttttccccac
tttctcctataagtttcagtgtctctgattttatgtgaagttccttgatc
ctcttagatttgatcttagtacaaggagataggtatggatggattcgcat
tcttctacatgataacaaccagttgtgccagcaccatttgttgaaaatgc
tgtctttcttccactggatggttttaactcccttgtcgaagatcaagtga
ccataggtgtgtgggttcatttctgggtcttcaattctattccattggtc
tacttgtctgtcagtataccagtaccatgcagtttttatcacaattgctc
tgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttta
tccttgagaagagtttttgctatcctaggttttttgttattccaggtgaa
tttgcagattgctctttctaatttgttgaagaattgagttggaattttaa
tggggattgcattgaatctgaagattgcttttggcaagatagccattttt
acaatgttgatcctgccaatccatgagcatgggagatctttccatcttct
gagatcttctttaatttctttcttcagagacttgaagtttttatcataca
gatctttcacttccttagttagagtcacgccaagatatttttatattatt
tgtgactattgagaagggtgttgtttccctaatttctttctcagcctgtt
tatctttgtgtaggtaaggccattgacttgttggagtaattttaatatcc
agctactccatcgagcttgtttatcaggttaggagtctctgggattttta
gggccctatatgtatacatacaatcatcgcaaggaattgactcccttcaa
tgtatccttgagattccctttggcaagtctgctaactcagataagtgcat
gtagggaagggcacccgtgctggctcccg
gaattcaaagttaatgttcatacaccactttatgctgtttataatatatg
aagttcccaataacttttgtatttaaatattttctatgacaataacttcc
ctcttcatgtttttgtaaaatatttaaatgctgagattaattatctgtta
cctgtagcagtgagaaatggatgaaaagaattcttgatttttatcataaa
ataaaatttcttaagaatattagaagaataagcattttctattctgaatt
ttttaattattattttatacatttacatttctttttttttcttttttttt
cttctttgttatcagatattttttcatttacatttcaagtgctatcccaa
acaccctataccctcccagctccttgctccccaacccacccattccctct
tcctggacctggcattcccctgtactggggcatatgatcttcacaacacc
aagggcctctcctcccattgatggcaaactaggccatcctctgttacata
agaaatcagaaacacagctctgtgggggtgttggttagttcataacattg
ttcttcctatagggttgcagactcctttagctccttgggtactttctcta
gctcctccattgggggccctgtgttccatccaatagatgactgtgggcag
ccacttctatatttgccaggcattggcactgactcacaggagagagctat
atcggggtcctgtcagcaaaatctttctggcatatgcaatagtgtctggg
tttggttgttgtatatgggatggatccctaggtggggcagtctctggatg
gttttcttaatcagggtttctattcctgcacaaacatcatgaccaagaat
caagtttgagctcatggaggcatttcctcaactgaagctcctttctctgt
gaaactgcagctttgtcagtgacacaaaactagccagtacaattgacccc
ttgtcaacttgacacacaacacatcactagtaagctcaaccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_22108256_22108996
seq2: B6Ng01-092M04.g_69_809

seq1  GAATTCAAAGTTAATGTTCATACACCACTTTATGCTGTTTATAATATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTTAATGTTCATACACCACTTTATGCTGTTTATAATATATG  50

seq1  AAGTTCCCAATAACTTTTGTATTTAAATATTTTCTATGACAATAACTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCCAATAACTTTTGTATTTAAATATTTTCTATGACAATAACTTCC  100

seq1  CTCTTCATGTTTTTGTAAAATATTTAAATGCTGAGATTAATTATCTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCATGTTTTTGTAAAATATTTAAATGCTGAGATTAATTATCTGTTA  150

seq1  CCTGTAGCAGTGAGAAATGGATGAAAAGAATTCTTGATTTTTATCATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAGCAGTGAGAAATGGATGAAAAGAATTCTTGATTTTTATCATAAA  200

seq1  ATAAAATTTCTTAAGAATATTAGAAGAATAAGCATTTTCTATTCTGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTTCTTAAGAATATTAGAAGAATAAGCATTTTCTATTCTGAATT  250

seq1  TTTTAATTATTATTTTATACATTTACATTTCTTTTTTTTTCTTTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTATTATTTTATACATTTACATTTCTTTTTTTTTCTTTTTTTTT  300

seq1  CTTCTTTGTTATCAGATATTTTTTCATTTACATTTCAAGTGCTATCCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGTTATCAGATATTTTTTCATTTACATTTCAAGTGCTATCCCAA  350

seq1  ACACCCTATACCCTCCCAGCTCCTTGCTCCCCAACCCACCCATTCCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTATACCCTCCCAGCTCCTTGCTCCCCAACCCACCCATTCCCTCT  400

seq1  TCCTGGACCTGGCATTCCCCTGTACTGGGGCATATGATCTTCACAACACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGACCTGGCATTCCCCTGTACTGGGGCATATGATCTTCACAACACC  450

seq1  AAGGGCCTCTCCTCCCATTGATGGCAAACTAGGCCATCCTCTGTTACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCCTCTCCTCCCATTGATGGCAAACTAGGCCATCCTCTGTTACATA  500

seq1  AGAAATCAGAAACACAGCTCTGTGGGGGTGTTGGTTAGTTCATAACATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCAGAAACACAGCTCTGTGGGGGTGTTGGTTAGTTCATAACATTG  550

seq1  TTCTTCCTATAGGGTTGCAGACTCCTTTAGCTCCTTGGGTACTTTCTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTATAGGGTTGCAGACTCCTTTAGCTCCTTGGGTACTTTCTCTA  600

seq1  GCTCCTCCATTGGGGGCCCTGTGTTCCATCCAATAGATGACTGTGGGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCCATTGGGGGCCCTGTGTTCCATCCAATAGATGACTGTGGGCAG  650

seq1  CCACTTCTATATTTGCCAGGCATTGGCACTGACTCACAGGAGAGAGCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCTATATTTGCCAGGCATTGGCACTGACTCACAGGAGAGAGCTAT  700

seq1  ATCGGGGTCCTGTCAGCAAAATCTTTCTGGCATATGCAATA  741
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGGGTCCTGTCAGCAAAATCTTTCTGGCATATGCAATA  741