BAC Information

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BAC

Clone NameB6Ng01-093C21
Chromosome15 (Build37)
Map Location 90,919,320 - 91,088,239
singlet/doubletdoublet
Overlap geneEG635871, Abcd2, LOC545126
Upstream geneAlg10b, Cpne8, EG627342, LOC100042462, LOC100042471, EG667682, Tcea1-ps1, Spn-ps, Kif21a
Downstream geneSlc2a13, Lrrk2, Muc19, Smgc, LOC100042529, Cntn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093C21.bB6Ng01-093C21.g
ACCDH904736DH904737
length1,044906
definitionDH904736|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C21, 5' end.DH904737|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,919,320 - 90,920,364)(91,087,333 - 91,088,239)
sequence
gaattcttgcctagaaatcactgtttcttgagcattgcctacccattatc
atcccttgggagtttttaacacattctttctggatgggtgggctcagatg
acctcagttgagttttgcaggtaggactcaaaaatattttgttggttttg
tttttgagataatggcctgctttgtagctcatgacccttctgccttaacg
ctttggatactgggattgcaaatgtgtgctgtccacccttgttacctgct
acatctaccagggaggagtgcatctcaaaaagcaacacttaggagcaagc
cctttaaacaggatttctagttgttgaaatgtgataaataccttgaggtc
tactgagtggttcctggactaacaacaagtaataggccttagagccagaa
aaccgactttcgctctgtccactcttcttccctttctgattcccctccac
tttgctcccaactattgctctttattttaggttttccaggagtacccggc
atccaccctctggtgtcattagcttaaataatcagcaaaataggacctgc
ggtgctaatccacacctaacgttgtgttgtgagcaacctcttggagtggt
agcaacctaaatgttttcaagcttcatgccacagtgccgtgcccttcatc
tttaagaatttcctaaccagtaaatccaatacatacaattgtgaatgctt
cccctgtggatagcggcctgacccgaaagtcacccttcccctatctattg
aagcgatgaaatggctaatgtacttgactaggtatgtcctgggatgggtg
ctatctaccgggtgaatttataaaataaataacaaaaaaaactattgttc
tgtcgtcttaaaatccgaccatggggaaaaaacaaaacaaaagcctctaa
ttcacctgtaactagttatcacaaaagagtaagccttcattatgctgtac
ttaaccctacagtaatgggccccaaattgtggaaagcatgattttggtat
tcattagttctgatatcgggtgaagggaaacaactgcaaatcaa
gaattcttacaaaaataaataaatgatatattatgtttatctgtatacat
ttatgtgatacaataagtacatatatatacaagtgtgtgtatatttatat
atcttgataagaaacttttataaaaatttattcactttatagatgtaaat
cactaatacttggtcaaatagttaattttactttattgtttacatttttc
taacattacattttaaattttcctaagatttttaactttgaaaataactt
ttgtttgtgtaattttttttctatggttggctgaactcttcttaaagtaa
aaagagacaaaaatgatgttaaattaatatagcatacattaataagccaa
aaatcagtgacttaccaagtcagtactggagctgaacgtgctctcggtcg
gccgaggagagtagctggcagactggctgctctgcgaagactccaggtct
gaaagaaaggttcattcgtgctacgcatgcgtcagcaaagtgaaaagcat
cgagtgtcactgactgagcaaccggcgctgttaaatgtgccaggcttact
taaaggtttgaagtttaacacttgtttttctagcaggacaaataggtgtt
ttctcttaaaaagatttgtgtccacaagtaaattaaatttcaaaatgaca
taaaataagagtagagaaaatatgattgacttttcaatatatgaaccttt
tttgagagcgaatatctaaaagtgggacccaggaagcaccaagctcatga
aacctgcggcaggggtgcctgcttgtctagcgagcagacatctcagcgca
gtccggactgtgcgatggcgactatcatgtcaatatctgcatattcaatt
acttttcaattccatataaagtttgcaatgggactggatgtatgtcgcgg
ctttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_90919320_90920364
seq2: B6Ng01-093C21.b_38_1081

seq1  GAATTCTTGCCTAGAAATCACTGTTTCTTGAGCATTGCCTACCCATTAGC  50
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAATTCTTGCCTAGAAATCACTGTTTCTTGAGCATTGCCTACCCATTATC  50

seq1  ATCCCTTGGGAGTTTTTAACACATTCTTTCTGGATGGGTGGGCTCAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTGGGAGTTTTTAACACATTCTTTCTGGATGGGTGGGCTCAGATG  100

seq1  ACCTCAGTTGAGTTTTGCAGGTAGGACTCAAAAATATTTTGTTGGTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGTTGAGTTTTGCAGGTAGGACTCAAAAATATTTTGTTGGTTTTG  150

seq1  TTTTTGAGATAATGGCCTGCTTTGTAGCTCATGACCCTTCTGCCTTAACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGATAATGGCCTGCTTTGTAGCTCATGACCCTTCTGCCTTAACG  200

seq1  CTTTGGATACTGGGATTGCAAATGTGTGCTGTCCACCCTTGTTACCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGATACTGGGATTGCAAATGTGTGCTGTCCACCCTTGTTACCTGCT  250

seq1  ACATCTACCAGGGAGGAGTGCATCTCAAAAAGCAACAGTTAGGAGCAAGC  300
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACATCTACCAGGGAGGAGTGCATCTCAAAAAGCAACACTTAGGAGCAAGC  300

seq1  CCTTTAAACAGGATTTCTAGTTGTTGAAATGTGATAAATACCTTGAGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAACAGGATTTCTAGTTGTTGAAATGTGATAAATACCTTGAGGTC  350

seq1  TACTGAGTGGTTCCTGGACTAACAACAAGTAATAGGCCTTAGAGCCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGTGGTTCCTGGACTAACAACAAGTAATAGGCCTTAGAGCCAGAA  400

seq1  AACCGACTTTCGCTCTGTCCACTCTTCTTCCCTTTCTGATTCCCCTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGACTTTCGCTCTGTCCACTCTTCTTCCCTTTCTGATTCCCCTCCAC  450

seq1  TTTGCTCCCAACAATTGCTCTTTATTTTAGTTTTTCCAGGAGTACCCGGC  500
      |||||||||||| ||||||||||||||||| |||||||||||||||||||
seq2  TTTGCTCCCAACTATTGCTCTTTATTTTAGGTTTTCCAGGAGTACCCGGC  500

seq1  ATCCACCCTCTGGTGTCATTAGCTTAAATAATCAGCAAGATAGGACCTGC  550
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATCCACCCTCTGGTGTCATTAGCTTAAATAATCAGCAAAATAGGACCTGC  550

seq1  GGTGCTAAGCCACACCTAAGGTTGTGTTGTGAGCAACCTCTTGGAGTGGT  600
      |||||||| |||||||||| ||||||||||||||||||||||||||||||
seq2  GGTGCTAATCCACACCTAACGTTGTGTTGTGAGCAACCTCTTGGAGTGGT  600

seq1  AGCAACCTAAACGTTTTCAAGCTTCATGCCACAGTGCCGTGCCCTCCATC  650
      ||||||||||| ||||||||||||||||||||||||||||||||| ||||
seq2  AGCAACCTAAATGTTTTCAAGCTTCATGCCACAGTGCCGTGCCCTTCATC  650

seq1  TTTAAGAATTTCATAACAAGTAAATCCAATACATGCAAGTTGTGAATGCT  700
      |||||||||||| |||| |||||||||||||||| ||| |||||||||||
seq2  TTTAAGAATTTCCTAACCAGTAAATCCAATACATACAA-TTGTGAATGCT  699

seq1  TCCCCTGTGGTTAGC-GCCTGACCCGAAAGTCACCCTTCCCCTATCTATT  749
      |||||||||| |||| ||||||||||||||||||||||||||||||||||
seq2  TCCCCTGTGGATAGCGGCCTGACCCGAAAGTCACCCTTCCCCTATCTATT  749

seq1  GAAGCGATG-AATGGCTAATGTACTTGACTAGGCATGCCCTGGGATGGGT  798
      ||||||||| ||||||||||||||||||||||| ||| ||||||||||||
seq2  GAAGCGATGAAATGGCTAATGTACTTGACTAGGTATGTCCTGGGATGGGT  799

seq1  GCTAACTACAGGGTGAATTT-TCAAATTAATAAC-AAAAAAACAATTGTT  846
      |||| |||| |||||||||| | |||| |||||| |||||||| ||||||
seq2  GCTATCTACCGGGTGAATTTATAAAATAAATAACAAAAAAAACTATTGTT  849

seq1  CTGCCCTCTTAAGAACCGAGCAGGGGGAAAAAACAAAACCAAAGCCT-TT  895
      ||| | |||||| | |||| || |||||||||||||||| ||||||| | 
seq2  CTGTCGTCTTAAAATCCGACCATGGGGAAAAAACAAAACAAAAGCCTCTA  899

seq1  ATTCAGCTGTAACTTGTAAACACAAAGGAGTAAGCCCTCTTTATGCAGTA  945
      ||||| |||||||| || | |||||| ||||||||| || |||||| |||
seq2  ATTCACCTGTAACTAGTTATCACAAAAGAGTAAGCCTTCATTATGCTGTA  949

seq1  GCTAACACCACAGTTATGGGCCACAAAATTGCAGGAAAGCATGATGTTGG  995
        |||| | ||||| ||||||| | ||||||  |||||||||||| ||||
seq2  CTTAACCCTACAGTAATGGGCC-CCAAATTG-TGGAAAGCATGATTTTGG  997

seq1  TATTTCATTAGTTCTGATATTGGTGTGAAGGGAAAACACATGCAAATCAA  1045
      || ||||||||||||||||| || |||||||| |||||  ||||||||||
seq2  TA-TTCATTAGTTCTGATATCGG-GTGAAGGG-AAACAACTGCAAATCAA  1044

seq1: chr15_91087333_91088239
seq2: B6Ng01-093C21.g_66_971 (reverse)

seq1  ACAAAGCCACGACATACATCCAGTCCCATTCCAAACTTTATTTGGAATTG  50
      |||||||| ||||||||||||||||||||| |||||||||| ||||||||
seq2  ACAAAGCCGCGACATACATCCAGTCCCATTGCAAACTTTATATGGAATTG  50

seq1  AAAAGTAATTGACTAAGCAGATACTGACATGCTAGGCGGCATCGCACAGT  100
      |||||||||||| || ||||||| ||||||| ||| || |||||||||||
seq2  AAAAGTAATTGAATATGCAGATATTGACATGATAGTCGCCATCGCACAGT  100

seq1  CCTGACTGCACTGAGATGTCTGCTCGCTAGACAAGCAGGCACCCCATGCC  150
      || |||||| ||||||||||||||||||||||||||||||||||| ||||
seq2  CCGGACTGCGCTGAGATGTCTGCTCGCTAGACAAGCAGGCACCCC-TGCC  149

seq1  GCAGGCTTCATGAGCTTGGTGCCTCCTGGGTCACACTTTAAGATATTCGC  200
      ||||| |||||||||||||||| ||||||||| |||||| ||||||||||
seq2  GCAGGTTTCATGAGCTTGGTGCTTCCTGGGTCCCACTTTTAGATATTCGC  199

seq1  TCTTAAAAATGGTTCATATATTGAAAAGTCAATCCTATTTTCTCTACTCT  250
      ||| ||||| |||||||||||||||||||||||| |||||||||||||||
seq2  TCTCAAAAAAGGTTCATATATTGAAAAGTCAATCATATTTTCTCTACTCT  249

seq1  TATTTTATGTCATTTTGAAATTTAATTTACTTGTGGACACAAATCTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TATTTTATGTCATTTTGAAATTTAATTTACTTGTGGACACAAATCTTTTT  299

seq1  AAGAGAAAACACCTATTTGTCCTGCTAGAAAAACAAGTGTTAAACTTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAACACCTATTTGTCCTGCTAGAAAAACAAGTGTTAAACTTCAA  349

seq1  ACCTTTAAGTAAGCCTGGCACATTTAACAGCGCCGGTTGCTCAGTCAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTAAGTAAGCCTGGCACATTTAACAGCGCCGGTTGCTCAGTCAGTG  399

seq1  ACACTCGATGCCTTTCACTTTGCTGACGCATGCGTAGCACGAATGAACCT  450
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACACTCGATGCTTTTCACTTTGCTGACGCATGCGTAGCACGAATGAACCT  449

seq1  TTCTTTCAGACCTGGAGTCTTCGCAGAGCAGCCAGTCTGCCAGCTACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCAGACCTGGAGTCTTCGCAGAGCAGCCAGTCTGCCAGCTACTCT  499

seq1  CCTCGGCCGACCGAGAGCACGTTCAGCTCCAGTACTGACTTGGTAAGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGCCGACCGAGAGCACGTTCAGCTCCAGTACTGACTTGGTAAGTCA  549

seq1  CTGATTTTTGGCTTATTAATGTATGCTATATTAATTTAACATCATTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTTGGCTTATTAATGTATGCTATATTAATTTAACATCATTTTTG  599

seq1  TCTCTTTTTACTTTAAGAAGAGTTCAGCCAACCATAGAAAAAAAATTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTTACTTTAAGAAGAGTTCAGCCAACCATAGAAAAAAAATTACA  649

seq1  CAAACAAAAGTTATTTTCAAAGTTAAAAATCTTAGGAAAATTTAAAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAAGTTATTTTCAAAGTTAAAAATCTTAGGAAAATTTAAAATGT  699

seq1  AATGTTAGAAAAATGTAAACAATAAAGTAAAATTAACTATTTGACCAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAGAAAAATGTAAACAATAAAGTAAAATTAACTATTTGACCAAGT  749

seq1  ATTAGTGATTTACATCTATAAAGTGAATAAATTTTTATAAAAGTTTCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGATTTACATCTATAAAGTGAATAAATTTTTATAAAAGTTTCTTA  799

seq1  TCAAGATATATAAATATACACACACTTGTATATATATGTACTTATTGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATATATAAATATACACACACTTGTATATATATGTACTTATTGTAT  849

seq1  CACATAAATGTATACAGATAAACATAATATATCATTTATTTATTTTTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CACATAAATGTATACAGATAAACATAATATATCATTTATTTATTTTTGTA  899

seq1  AGAATTC  907
      |||||||
seq2  AGAATTC  906