BAC Information

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BAC

Clone NameB6Ng01-094D04
Chromosome15 (Build37)
Map Location 90,105,204 - 90,106,416
singlet/doubletsinglet
Overlap genenone
Upstream geneSaps2, Sbf1, Adm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3, Acr, Rabl2a, LOC676575, Syt10, Alg10b
Downstream geneCpne8, EG627342, LOC100042462, LOC100042471, EG667682, Tcea1-ps1, Spn-ps, Kif21a, EG635871, Abcd2, LOC545126, Slc2a13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094D04.bB6Ng01-094D04.g
ACCDH905481DH905482
length1,1811,161
definitionDH905481|Mus musculus domesticus DNA, BAC clone: B6Ng01-094D04, 5' end.DH905482|Mus musculus domesticus DNA, BAC clone: B6Ng01-094D04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttaaaaaatgatatcagatttctggataaaaacacatgctg
tctctttaagactaggaaggctgggagaaatagttccttatcaacgtcag
ttttccccaaaccatgctggttctggacaagggttggagtgcatgctagt
ctgctgtgtgagtcccaggggttaaagtgtaagctcaaatacagctgctc
ggcccgttcattctcctcctccttttgattactctgattgaaggtttgtc
aatcttttaaatctactcaaagaaccaactctctgtttcattattccttg
cactatctttttttccatttctcttttgttatcagcccctgatttttaag
aatcctttacataagtgctctatttacataatttccactcttccctctca
cctttcaactcttcttttgtactcccaaactccctctcaaattcatgata
tcttctttaatgattattgacatatatacatgctataccacacacacaca
cacacacacacacacacacacacacacacacattatcttgtttactcatg
tttttgagatcttgtaacaagaattagggatatggaattaggacaatgtt
agtgtttgttagtatcttatgtataaatattactgggtatttctccataa
gtttgcattattgagttatttatcaagtttcacattattaggaatattta
taaccaatccctggcagcctcaaagagccctgttagatagcctctaaaac
gtgcaaatgctgtataacttaataattctttttatgtttcctttagtctg
ttctataaagtcactatcaaaatatgttagcttttcgggttcctgaatca
ctgaagaatgatgataccccagactcgaatagtatgcaaaagcaagaaca
tttatctctgtatgatgtgcccaattccatcaggatggaagacccgactg
gattcacagattcattttaaagtcaaagagacattaggagagtagtgatc
tatatctgattggtggtttatctctgggcctctggtgatgctatgatcag
atattattcttgcttcatgctatggagggtagctcttgactcttgcctca
gcttgctaactggtcttttgcaactgggaagaatcctctgacttgagcct
gcagtggttcaataccgactgccatttctgt
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgcttacagtcagctaatggatggatcatagggctccca
tggaggagctagagaaagtagccaggagctaaagggatctgcaccctata
gtgaacacattatgagctacagtaccccgagctctgactctagctgcaaa
ttatcaagatgctagtcgcatcactgaagaagagccattgactgcaactt
atatgcccagtaaggcattacaagccaaaagggtaatggtgtgccaaggt
gatgttgggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_90105204_90106416
seq2: B6Ng01-094D04.b_44_1224

seq1  GAATTCACTTTAAAAAATGATATCAGATTTCTGGATAAAAACACATGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTAAAAAATGATATCAGATTTCTGGATAAAAACACATGCTG  50

seq1  TCTCTTTAAGACTAGGAAGGCTGGGAGAAATAGTTCCTTATCAACGTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTAAGACTAGGAAGGCTGGGAGAAATAGTTCCTTATCAACGTCAG  100

seq1  TTTTCCCCAAACCATGCTGGTTCTGGACAAGGGTTGGAGTGCATGCTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCCAAACCATGCTGGTTCTGGACAAGGGTTGGAGTGCATGCTAGT  150

seq1  CTGCTGTGTGAGTCCCAGGGGTTAAAGTGTAAGCTCAAATACAGCTGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGTGAGTCCCAGGGGTTAAAGTGTAAGCTCAAATACAGCTGCTC  200

seq1  GGCCCGTTCATTCTCCTCCTCCTTTTGATTACTCTGATTGAAGGTTTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGTTCATTCTCCTCCTCCTTTTGATTACTCTGATTGAAGGTTTGTC  250

seq1  AATCTTTTAAATCTACTCAAAGAACCAACTCTCTGTTTCATTATTCCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTAAATCTACTCAAAGAACCAACTCTCTGTTTCATTATTCCTTG  300

seq1  CACTATCTTTTTTTCCATTTCTCTTTTGTTATCAGCCCCTGATTTTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATCTTTTTTTCCATTTCTCTTTTGTTATCAGCCCCTGATTTTTAAG  350

seq1  AATCCTTTACATAAGTGCTCTATTTACATAATTTCCACTCTTCCCTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTTACATAAGTGCTCTATTTACATAATTTCCACTCTTCCCTCTCA  400

seq1  CCTTTCAACTCTTCTTTTGTACTCCCAAACTCCCTCTCAAATTCATGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAACTCTTCTTTTGTACTCCCAAACTCCCTCTCAAATTCATGATA  450

seq1  TCTTCTTTAATGATTATTGACATATATACATGCTATACCACACACACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTAATGATTATTGACATATATACATGCTATACCACACACACACA  500

seq1  CACACACACACACACACACACACACACACACATTATCTTGTTTACTCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACATTATCTTGTTTACTCATG  550

seq1  TTTTTGAGATCTTGTAACAAGAATTAGGGATATGGAATTAGGACAATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGATCTTGTAACAAGAATTAGGGATATGGAATTAGGACAATGTT  600

seq1  AGTGTTTGTTAGTATCTTATGTATAAATATTACTGGGTATTTCTCCATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTGTTAGTATCTTATGTATAAATATTACTGGGTATTTCTCCATAA  650

seq1  GTTTGCATTATTGAGTTATTTATCAAGTTTCACATTATTAGGAATATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCATTATTGAGTTATTTATCAAGTTTCACATTATTAGGAATATTTA  700

seq1  TAACCAATCCCTGGCAGCCTCAAAGAGCCCTGTTAGATAGCCTCTAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAATCCCTGGCAGCCTCAAAGAGCCCTGTTAGATAGCCTCTAAAAC  750

seq1  GTGCAAATGCTGTATAACTTAATAATTCTTTTTATGTTTCCTTTAGTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAATGCTGTATAACTTAATAATTCTTTTTATGTTTCCTTTAGTCTG  800

seq1  TTCTATAAAGTCACTATCAAAATATGTTAGCTTTTCGGGTTCCTGAATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAAAGTCACTATCAAAATATGTTAGCTTTTCGGGTTCCTGAATCA  850

seq1  CTGAAGAATGATGATACCCCAGACTCGAATAGTATGCAAAAGCAAAGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGAAGAATGATGATACCCCAGACTCGAATAGTATGCAAAAGC-AAGAAC  899

seq1  ATTTATCTCTGTATGATGTGGCCCAATTCCATCAGGATGGAAGGACCCCG  950
      ||||||||||||||||||| |||||||||||||||||||||||   ||||
seq2  ATTTATCTCTGTATGATGT-GCCCAATTCCATCAGGATGGAAG--ACCCG  946

seq1  ACTGGATTCACAGATTCAATTTTAAAGTCAAAAAGAGGAACATTAGGGAG  1000
      ||||||||||||||||| |||||||||||||| ||    |||||| ||||
seq2  ACTGGATTCACAGATTC-ATTTTAAAGTCAAAGAG----ACATTA-GGAG  990

seq1  AGGTAGGTGATCTATATCTTGATTGGTGGGTTTTATCTCTGGGGCTCTGG  1050
      | ||| |||||||||||| ||||||||||  |||||||||||| |||| |
seq2  A-GTA-GTGATCTATATC-TGATTGGTGG--TTTATCTCTGGGCCTCT-G  1034

seq1  GTGATGCTATGATTCAGATTAATTATTCTTGCTTCATGCTATGGAGGGGT  1100
      |||||||||||| ||||||  |||||||||||||||||||||||| ||||
seq2  GTGATGCTATGA-TCAGAT--ATTATTCTTGCTTCATGCTATGGA-GGGT  1080

seq1  AGCTCTTGACTTCTTGGCCTCAAGCTTGGCTAACTGTCTTTTTGCAAACT  1150
      |||||||||| |||| ||||| ||||| ||||||||   |||||| ||||
seq2  AGCTCTTGAC-TCTT-GCCTC-AGCTT-GCTAACTGGTCTTTTGC-AACT  1125

seq1  GGGGAAGGATACCTCTTGACATGAGCCTGCAGTTGTTCCAGTAACTGACT  1200
       |||||| || |||| |||| |||||||||||| |||| |   || ||||
seq2  -GGGAAGAAT-CCTC-TGACTTGAGCCTGCAGTGGTTCAA--TACCGACT  1170

seq1  TGCCCATTTCTGT  1213
         ||||||||||
seq2  --GCCATTTCTGT  1181