BAC Information

Click to search

BAC

Clone NameB6Ng01-095A19
Chromosome15 (Build37)
Map Location 55,153,725 - 55,292,106
singlet/doubletdoublet
Overlap geneCol14a1
Upstream geneColec10, Mal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6
Downstream geneMrpl13, Mtbp, Sntb1, LOC665348, LOC100039908, Hba-ps3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095A19.bB6Ng01-095A19.g
ACCDH906093DH906094
length590801
definitionDH906093|Mus musculus domesticus DNA, BAC clone: B6Ng01-095A19, 5' end.DH906094|Mus musculus domesticus DNA, BAC clone: B6Ng01-095A19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,153,725 - 55,154,320)(55,291,306 - 55,292,106)
sequence
attagaatgaacgatcaagaagaaagatatgatgaagggtatttggcact
agtctctttttaaaaactttaaggtgtgatttacatgtcctgttattttc
tcacttcaagtgcacattttgtcaagttttagtatagtcatgtgatggtg
aggtcatcaccacaaatacattttaaggtagcatccatttttaaattaac
ttttggaattatgggtttcattgtacaggttaattcataaatatcatgca
attcgtttgtatttgtatgttcattcccacatccttctcaccccttaatg
atggtttttcctggctcccatatcctgggttggttaggttttgaggcagg
atctcatataagctctcctcatgatctttctgcttccacttcccaagtgc
caggactataactgtgtaccacaactcctgcctaaggacttaaaaacaaa
acagacaaaataacaacaaaagcatgaaaccaaactatacctcaactcaa
ccaccagcaatatacttcaggtgaaagtgtgaagttttgctggttaaaaa
aaaaaaatccatgcaatttgggagggaaggggaaggggaa
gaattcaaaacaacacagttcaaaagacatataaaagacagattttttaa
gacacaagaaaagacatgtaaccttccacatttacacttagtaatttctc
taactggaatcctcagtcaattgcaaatgctcatttttcatcactggaca
tttttgtctgggtgtaactcaaaaggcaagtcatttggggtcaaatgtta
gcaagaaaataagattaaaatattttcagcacttgagtcattttgatcta
tgaatgggagtttcaaagttctcttggctccccttgccactcagtaccgg
attttctcctccaacttttttcttaaagaatgtaagtatattcatgaatt
tatacaaatcaagggcttcctgtatataacaagatcccatagagagagtt
gcagagacctaggacaccttccatttcttaccaagtatccaacttctcgt
tgacttcatcaagaaagcaagaagtactttgccatggtagagttccgagc
tagggcttgcttttaagttattaaattttaggaaacacatgagcattccg
attaaattaagaaatgaaagttagccattattgtgcctcttgataggata
aatgcttatgtgtagaaatattttgagagtaagatatgaccaaggttatt
tgcaagattgtaactgaaatagtgaatccttgaagctgtggaagaagaga
tgggcacatggcctctgaatcacacctgttgtcttaaggtggacagaatc
agagtccagcactgcaatggaagccagacagtccgggggtggggtggggg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_55153725_55154320
seq2: B6Ng01-095A19.b_36_631

seq1  GAATTCATTAGAATGAACGATCAAGAAGAAAGATATGATGAAGGGTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGAATGAACGATCAAGAAGAAAGATATGATGAAGGGTATTT  50

seq1  GGCACTAGTCTCTTTTTAAAAACTTTAAGGTGTGATTTACATGTCCTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTAGTCTCTTTTTAAAAACTTTAAGGTGTGATTTACATGTCCTGTT  100

seq1  ATTTTCTCACTTCAAGTGCACATTTTGTCAAGTTTTAGTATAGTCATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCACTTCAAGTGCACATTTTGTCAAGTTTTAGTATAGTCATGTG  150

seq1  ATGGTGAGGTCATCACCACAAATACATTTTAAGGTAGCATCCATTTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAGGTCATCACCACAAATACATTTTAAGGTAGCATCCATTTTTAA  200

seq1  ATTAACTTTTGGAATTATGGGTTTCATTGTACAGGTTAATTCATAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTTTTGGAATTATGGGTTTCATTGTACAGGTTAATTCATAAATAT  250

seq1  CATGCAATTCGTTTGTATTTGTATGTTCATTCCCACATCCTTCTCACCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAATTCGTTTGTATTTGTATGTTCATTCCCACATCCTTCTCACCCC  300

seq1  TTAATGATGGTTTTTCCTGGCTCCCATATCCTGGGTTGGTTAGGTTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGATGGTTTTTCCTGGCTCCCATATCCTGGGTTGGTTAGGTTTTGA  350

seq1  GGCAGGATCTCATATAAGCTCTCCTCATGATCTTTCTGCTTCCACTTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGATCTCATATAAGCTCTCCTCATGATCTTTCTGCTTCCACTTCCC  400

seq1  AAGTGCCAGGACTATAACTGTGTACCACAACTCCTGCCTAAGGACTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCAGGACTATAACTGTGTACCACAACTCCTGCCTAAGGACTTAAA  450

seq1  AACAAAACAGACAAAATAACAACAAAAGCATGAAACCAAACTATACCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAGACAAAATAACAACAAAAGCATGAAACCAAACTATACCTCA  500

seq1  ACTCAACCACCAGCAATATACTTCAGGTGAAAGTGTGAAGTTTTGCTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACCACCAGCAATATACTTCAGGTGAAAGTGTGAAGTTTTGCTGGT  550

seq1  TAAAAAAAAAAAATCCATGCAATTTGGGAGGGAAGGGGAAGGGGAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAAAATCCATGCAATTTGGGAGGGAAGGGGAAGGGGAA  596

seq1: chr15_55291306_55292106
seq2: B6Ng01-095A19.g_66_866 (reverse)

seq1  CCCCCCACCCCACCCCCGGACTGTCTGGCTTCCATTGCAGTGCTGGACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACCCCACCCCCGGACTGTCTGGCTTCCATTGCAGTGCTGGACTC  50

seq1  TGATTCTGTCCACCTTAAGACAACAGGTGTGATTCAGAGGCCATGTGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTGTCCACCTTAAGACAACAGGTGTGATTCAGAGGCCATGTGCCC  100

seq1  ATCTCTTCTTCCACAGCTTCAAGGATTCACTATTTCAGTTACAATCTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTCTTCCACAGCTTCAAGGATTCACTATTTCAGTTACAATCTTGC  150

seq1  AAATAACCTTGGTCATATCTTACTCTCAAAATATTTCTACACATAAGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACCTTGGTCATATCTTACTCTCAAAATATTTCTACACATAAGCAT  200

seq1  TTATCCTATCAAGAGGCACAATAATGGCTAACTTTCATTTCTTAATTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTATCAAGAGGCACAATAATGGCTAACTTTCATTTCTTAATTTAA  250

seq1  TCGGAATGCTCATGTGTTTCCTAAAATTTAATAACTTAAAAGCAAGCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAATGCTCATGTGTTTCCTAAAATTTAATAACTTAAAAGCAAGCCCT  300

seq1  AGCTCGGAACTCTACCATGGCAAAGTACTTCTTGCTTTCTTGATGAAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCGGAACTCTACCATGGCAAAGTACTTCTTGCTTTCTTGATGAAGTC  350

seq1  AACGAGAAGTTGGATACTTGGTAAGAAATGGAAGGTGTCCTAGGTCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAGAAGTTGGATACTTGGTAAGAAATGGAAGGTGTCCTAGGTCTCTG  400

seq1  CAACTCTCTCTATGGGATCTTGTTATATACAGGAAGCCCTTGATTTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCTCTATGGGATCTTGTTATATACAGGAAGCCCTTGATTTGTAT  450

seq1  AAATTCATGAATATACTTACATTCTTTAAGAAAAAAGTTGGAGGAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATGAATATACTTACATTCTTTAAGAAAAAAGTTGGAGGAGAAAA  500

seq1  TCCGGTACTGAGTGGCAAGGGGAGCCAAGAGAACTTTGAAACTCCCATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGTACTGAGTGGCAAGGGGAGCCAAGAGAACTTTGAAACTCCCATTC  550

seq1  ATAGATCAAAATGACTCAAGTGCTGAAAATATTTTAATCTTATTTTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCAAAATGACTCAAGTGCTGAAAATATTTTAATCTTATTTTCTTG  600

seq1  CTAACATTTGACCCCAAATGACTTGCCTTTTGAGTTACACCCAGACAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATTTGACCCCAAATGACTTGCCTTTTGAGTTACACCCAGACAAAA  650

seq1  ATGTCCAGTGATGAAAAATGAGCATTTGCAATTGACTGAGGATTCCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCAGTGATGAAAAATGAGCATTTGCAATTGACTGAGGATTCCAGTT  700

seq1  AGAGAAATTACTAAGTGTAAATGTGGAAGGTTACATGTCTTTTCTTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATTACTAAGTGTAAATGTGGAAGGTTACATGTCTTTTCTTGTGT  750

seq1  CTTAAAAAATCTGTCTTTTATATGTCTTTTGAACTGTGTTGTTTTGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAAATCTGTCTTTTATATGTCTTTTGAACTGTGTTGTTTTGAATT  800

seq1  C  801
      |
seq2  C  801