BAC Information

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BAC

Clone NameB6Ng01-095N08
Chromosome15 (Build37)
Map Location 13,330,982 - 13,331,542
singlet/doubletsinglet
Overlap genenone
Upstream genePdzd2, LOC100040109, 6030458C11Rik, Rnasen, Cdh6, LOC100039907
Downstream geneLOC666686, LOC239338, LOC666708
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095N08.bB6Ng01-095N08.g
ACCDH906663DH906664
length946777
definitionDH906663|Mus musculus domesticus DNA, BAC clone: B6Ng01-095N08, 5' end.DH906664|Mus musculus domesticus DNA, BAC clone: B6Ng01-095N08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttgaattttg
tcaaatgctttctcggcatctaaggagatgatcatgtggtttttgtcttt
gagtttgtttatatactggattatgttgatggatttctgtatattgaaca
atccctacatccctgggatgaaacctacttggtcaggatggatgattgtt
ctgatgtgttcttagatgcagttagctaaaactttattgagtacttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttgggt
ctttttgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagtaccttctgcttctattttgtggaatagtttttgaagaactgg
gattagttcttctttgaaggtctgatagaactctgcagtaaaaccatctg
gtcctgggctttttttggttgagagactattaatgactgcttctatttct
ttaggggagatatgactgtttagatcattaacctgatcttgatttaactt
tggtacctggtatctgtctagaaacttttccatttcatccaggttctcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctctctttgcatttctgattttgttaat
taggatgctttccctgtgcactctagtgagtctggctaagatttatctat
cttgttgattttctcaaagaatcagctcctgttttggttgattctttgaa
tagatcttcttgtttccacttggttgatttcacccctgagtttgattatt
tcctgctgtgtactcctcttgggtgaatttgcttccttttattctagagc
tttaagtgtgttgtcaagctgctcttgtgtgctcttttctagtttc
gaattctcacctgaggaataccgaatggttgagaagcgcctgaaaaaata
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaactctgagat
tccatctcacaccagtcaaaatggctaagatcagaaattcaggtgacagc
agatgctgctgaggatgtggagaaaaagaaacactcctcctttattggtg
ggattgcaagctggtacaaccactctggaaatcagtctggtggttcctca
ggaaattggacatagtactactactggaggatccggcagtacctctcctg
ggcattatccagaagatgttccaactggtaagaaagacacatgctccact
attttcatagcagccttatttataatagccagaagctgaaaagaacccag
atgcccctcaacagaggaacggatacaaaaaatgtggcacatttacacaa
tggagtactactcagctattaaaaagaataaatttatgaaattcctaggc
aaatgtttggacctggagggcatcatcctgagtgaggtaacccaatcaca
aaagaactcaaatgatatgttctcactgataagtggatattagcccagaa
acttagaatacccaagatataagatacaatttgcaaaacacatgaagctc
aagaagaacgaagaccaaagaatagacacttttccctttcttagaattgg
ggaacaaaacatccatggaaggagttacagagacaaagtttggagctgag
acaaagggatggaccatctagagactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_13330982_13331542
seq2: B6Ng01-095N08.b_44_605 (reverse)

seq1  TACAAGGTACCAAAGTTAAATCAAGATCAGGTTAATGATCTAAACAGTCC  50
      ||| ||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TACCAGGTACCAAAGTTAAATCAAGATCAGGTTAATGATCTAAACAGTCA  50

seq1  TATATCGCCTAAAGATATAGAAACAGTCATTAATAGTCTCCCAACC-AAA  99
      ||| || |||||||| |||||| ||||||||||||||||| ||||| |||
seq2  TATCTCCCCTAAAGAAATAGAAGCAGTCATTAATAGTCTCTCAACCAAAA  100

seq1  AAAGCCCAGGACTAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAA  149
      |||||||||||| |||||| |||| |||||||||||||||||||||||||
seq2  AAAGCCCAGGACCAGATGGTTTTACTGCAGAGTTCTATCAGACCTTCAAA  150

seq1  GAATATCTAATCCCAGTTCTTCACAAACTATTCTACAAAATAGAAACAGA  199
      ||| | ||||||||||||||||| ||||||||| ||||||||||| ||||
seq2  GAAGAACTAATCCCAGTTCTTCAAAAACTATTCCACAAAATAGAAGCAGA  200

seq1  AGGTACTCTACCCAACTCATTCTATGAAGCCACAATTAGTCTGATACCTA  249
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGGTACTCTACCCAACTCATTCTATGAAGCCACAATTACTCTGATACCTA  250

seq1  AACCACAAAAAGACCCAACAAAGATAGAGAACTTCAGACCAATTTCCCTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAAAAAGACCCAACAAAGATAGAGAACTTCAGACCAATTTCCCTT  300

seq1  ATGAATATCGATGCAAAAATACTCAATAAAGTTTTCGCTTACCGAATCCA  349
      |||||||||||||||||| |||||||||||||||| ||| || | ||| |
seq2  ATGAATATCGATGCAAAAGTACTCAATAAAGTTTTAGCTAACTGCATCTA  350

seq1  AGAACACATCAAAACAATCATCCATCCTGACCAAGTAGGTTTCATCCCAG  399
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGAACACATCAGAACAATCATCCATCCTGACCAAGTAGGTTTCATCCCAG  400

seq1  GGATGCAGGGATGGTTCAATATACGGAAATCCATTAATGTAATCCAGTAT  449
      ||||| |||||| ||||||||||| ||||||||| ||  |||||||||||
seq2  GGATGTAGGGATTGTTCAATATACAGAAATCCATCAACATAATCCAGTAT  450

seq1  GTAAACAAACTCAAAGACAAAAACCACATGATTATCTCGTTAGATGCAGA  499
       ||||||||||||||||||||||||||||||| ||||| |||||||| ||
seq2  ATAAACAAACTCAAAGACAAAAACCACATGATCATCTCCTTAGATGCCGA  500

seq1  GAAAGCATTTGACAAAATCCAACACCCATTCATGATAAAAGTCTTGGAAA  549
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAAAGCATTTGACAAAATTCAACACCCATTCATGATAAAAGTCTTGGAAA  550

seq1  GATCAGGAATTC  561
      ||||||||||||
seq2  GATCAGGAATTC  562