BAC Information

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BAC

Clone NameB6Ng01-097A15
Chromosome15 (Build37)
Map Location 31,536,494 - 31,621,574
singlet/doubletdoublet
Overlap geneA930016P21Rik, LOC667231
Upstream geneCtnnd2, 9630009A06Rik, Dap, EG625796, 5730557B15Rik, Ropn1l, LOC622810, March6, Cmbl, Cct5
Downstream geneTas2r119, 0610007N19Rik, Sema5a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097A15.bB6Ng01-097A15.g
ACCDH907518DH907519
length9341,178
definitionDH907518|Mus musculus domesticus DNA, BAC clone: B6Ng01-097A15, 5' end.DH907519|Mus musculus domesticus DNA, BAC clone: B6Ng01-097A15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,536,494 - 31,537,427)(31,620,370 - 31,621,574)
sequence
gaattcaaaatggggataactgcatgtagctgtgtcccagtagtcaggag
gtggaggcaggaggattatgacttcaaggctagcctctcctatatacaga
atttgggtcacatgaggacctgtctaaaaggaaattcagaattttagtgg
cttcaacatgctgggatcccagcctgaatctctgagtaaagaaaaggtca
tgcctggcaggtgagtggttctcggtgaggcaggcggccacgtcctgaca
gcaggagtgcagacaatgggcggagcttgtgttctggcagcatgagtgta
cagaccaggcagattgcattactttcactagtcctgtggacactggcttg
ggaacaccttcttcttccatgctagaaggctgactggctttgtctcgtgc
aggcagccacagatgctgggagctcatgaggctgtggtcgtggggaggtt
atttttattgcttattatctgttgttgactttcattttcctccctgctct
gccagccactggtgcagaaatgtgcagattttcagctacagtttgttgtc
actagggttagctgagccagaatcaggaatacatttgtccaacacaaccc
tgagtgtctctcttctgatactcaaggtgaaatctttgagaaaatggaga
aaactttgggttggctgttgtcctgtccatgaatggtagaacttcagata
taccattttaaacatgttgtcttcatcaaagggggcagtagccattttaa
agcctgtattacttacatgaaataatgagtttcattgtgagactttgccc
atgtacatcacgcactttggtcctgtcactccacccacttctcttagctc
ctgtcttagttactgttccaatgctgtgataagacaccatgaccaaggca
ccttacagaagaagagtttgtgggggtggggggg
gaattctttgaaataacagtatttaatgaaacaaggaaccacaaatacct
tctgccacctcacagagacatgcctgccaaggcaagctacttattgctgt
ttacaccaaacctttaatatattctgttttcacttaaaatgctcattttc
caaattggttcaacttttaaaaaagaactactcaacttttgtagaaatat
ttttaaaagaaaatagatttactccatctgtcctctaaaagcaaaagcat
ctttattaatacaggaaagacaagtgactctaggctttttctgacacaga
caggaattctcactgtgtgccttcactgccccaaacaagacacatcacag
tgggaaatatattgggcatcttgccatccattacttttcaaaggaccact
ggaatatggagagatccttccctaccacagcctctcttcacatctcctta
aaaccttatggagatgctcccaggttcagaaagtcctcccagatcatgcc
ctgttctgggccagcagtgtcctcagttctatttgttgccctgaattata
ttggtcttagaactcaaacggcttaactctctgaatgacgaggactatgt
cttatcagtaccaaattccctcagtgaacaaaccacaaaatggtccatga
aaaccacagaaaatccaggagaatggtttccctgacatccatctcccact
ttaccctctctgccagaacctccatcctcattgatcagctgcggcaacaa
cccagacgccccacctggagcctacaactaggccctgtgcagactctcaa
cccccgatgtgctgtcaaaatgaaatgtattttagttttgcagcctttag
tagagtctgccttatctttaatgggcccacaaggacctgctgcctggggc
tttcctggcataagagctgaggcctggcagatgctctgctgggggcttgc
atgctcactcatctaccgtctctctttattctgtcaaaggatactttttc
cctcaaatcaccctccccacaaatacccaatgctgcactctggttgagtg
attttaaaaagctttcaaaagtcctgttagaattaattgaacagtacctt
gagcaatcttatgtgtatgatgaccatgtcagcagttcatagcatgacct
tggcctgggagagagctcgacggtaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_31536494_31537427
seq2: B6Ng01-097A15.b_44_977

seq1  GAATTCAAAATGGGGATAACTGCATGTAGCTGTGTCCCAGTAGTCAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATGGGGATAACTGCATGTAGCTGTGTCCCAGTAGTCAGGAG  50

seq1  GTGGAGGCAGGAGGATTATGACTTCAAGGCTAGCCTCTCCTATATACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGCAGGAGGATTATGACTTCAAGGCTAGCCTCTCCTATATACAGA  100

seq1  ATTTGGGTCACATGAGGACCTGTCTAAAAGGAAATTCAGAATTTTAGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGTCACATGAGGACCTGTCTAAAAGGAAATTCAGAATTTTAGTGG  150

seq1  CTTCAACATGCTGGGATCCCAGCCTGAATCTCTGAGTAAAGAAAAGGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACATGCTGGGATCCCAGCCTGAATCTCTGAGTAAAGAAAAGGTCA  200

seq1  TGCCTGGCAGGTGAGTGGTTCTCGGTGAGGCAGGCGGCCACGTCCTGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGCAGGTGAGTGGTTCTCGGTGAGGCAGGCGGCCACGTCCTGACA  250

seq1  GCAGGAGTGCAGACAATGGGCGGAGCTTGTGTTCTGGCAGCATGAGTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGTGCAGACAATGGGCGGAGCTTGTGTTCTGGCAGCATGAGTGTA  300

seq1  CAGACCAGGCAGATTGCATTACTTTCACTAGTCCTGTGGACACTGGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCAGGCAGATTGCATTACTTTCACTAGTCCTGTGGACACTGGCTTG  350

seq1  GGAACACCTTCTTCTTCCATGCTAGAAGGCTGACTGGCTTTGTCTCGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACCTTCTTCTTCCATGCTAGAAGGCTGACTGGCTTTGTCTCGTGC  400

seq1  AGGCAGCCACAGATGCTGGGAGCTCATGAGGCTGTGGTCGTGGGGAGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCCACAGATGCTGGGAGCTCATGAGGCTGTGGTCGTGGGGAGGTT  450

seq1  ATTTTTATTGCTTATTATCTGTTGTTGACTTTCATTTTCCTCCCTGCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTGCTTATTATCTGTTGTTGACTTTCATTTTCCTCCCTGCTCT  500

seq1  GCCAGCCACTGGTGCAGAAATGTGCAGATTTTCAGCTACAGTTTGTTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCACTGGTGCAGAAATGTGCAGATTTTCAGCTACAGTTTGTTGTC  550

seq1  ACTAGGGTTAGCTGAGCCAGAATCAGGAATACATTTGTCCAACACAACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGGTTAGCTGAGCCAGAATCAGGAATACATTTGTCCAACACAACCC  600

seq1  TGAGTGTCTCTCTTCTGATACTCAAGGTGAAATCTTTGAGAAAATGGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTCTCTCTTCTGATACTCAAGGTGAAATCTTTGAGAAAATGGAGA  650

seq1  AAACTTTGGGTTGGCTGTTGTCCTGTCCATGAATGGTAGAACTTCAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGGGTTGGCTGTTGTCCTGTCCATGAATGGTAGAACTTCAGATA  700

seq1  TACCATTTTAAACATGTTGTCTTCATCAAAGGGGGCAGTAGCCATTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTTTAAACATGTTGTCTTCATCAAAGGGGGCAGTAGCCATTTTAA  750

seq1  AGCCTGTATTACTTACATGAAATAATGAGTTTCATTGTGAGACTTTGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTATTACTTACATGAAATAATGAGTTTCATTGTGAGACTTTGCCC  800

seq1  ATGTACATCACGCACTTTGGTCCTGTCACTCCACCCACTTCTCTTAGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACATCACGCACTTTGGTCCTGTCACTCCACCCACTTCTCTTAGCTC  850

seq1  CTGTCTTAGTTACTGTTCCAATGCTGTGATAAGACACCATGACCAAGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTAGTTACTGTTCCAATGCTGTGATAAGACACCATGACCAAGGCA  900

seq1  CCTTACAGAAGAAGAGTTTGTGGGGGTGGGGGGG  934
      ||||||||||||||||||||||||||||||||||
seq2  CCTTACAGAAGAAGAGTTTGTGGGGGTGGGGGGG  934

seq1: chr15_31620370_31621574
seq2: B6Ng01-097A15.g_68_1245 (reverse)

seq1  CTTTACCGGCTGAGCTCTCTCCCCAGGCCAAGATTCCTATTGCTTATGAA  50
      |||||||| | ||||||||| |||||||||||     |  ||| ||||||
seq2  CTTTACCGTC-GAGCTCTCT-CCCAGGCCAAG----GTCATGC-TATGAA  43

seq1  CTGCTGGACCATGCTCATCATACACAATAGATTTGCCTCAAAAGGTAACT  100
      ||||||   |||| ||||||||||||  |||||   |||  ||||| |||
seq2  CTGCTG--ACATGGTCATCATACACATAAGATT--GCTC--AAGGT-ACT  86

seq1  G-TCAATTTA-TCTAACAGGGACTTTTGAAAGCTTTTTAAAAATCACTCA  148
      | |||||| | ||||||| ||||||||||||||||||| |||||||||| 
seq2  GTTCAATTAATTCTAACA-GGACTTTTGAAAGCTTTTT-AAAATCACTC-  133

seq1  AACCAGAGTGCAGCATTTGGGTATGTGTGGGGAGGGTGATTTGAGGTGAA  198
      ||||||||||||||| |||||||| ||||||||||||||||||||| |||
seq2  AACCAGAGTGCAGCA-TTGGGTATTTGTGGGGAGGGTGATTTGAGG-GAA  181

seq1  AAAGTTATCCCTTTGACAGAATAAAGAGAGGACGGTAGATGGAGTGAGGC  248
      |||| ||| |||||||||||||||||||| |||||||||| |||||| ||
seq2  AAAG-TAT-CCTTTGACAGAATAAAGAGA-GACGGTAGAT-GAGTGA-GC  226

seq1  ATGCAAGCCCCCAGCAGAGCATTCTGCCCAGGCCTCAGCCTCCTTAATGC  298
      ||||||||||||||||||||| |||| ||||||||||| |||  | ||||
seq2  ATGCAAGCCCCCAGCAGAGCA-TCTG-CCAGGCCTCAG-CTC--TTATGC  271

seq1  CAGGAAAGCCCCAGGCAGCAGGTCCTTGTGGGCCCATTAAAGATAAGGCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGCCCCAGGCAGCAGGTCCTTGTGGGCCCATTAAAGATAAGGCA  321

seq1  GACTCTACTAAAGGCTGCAAAACTAAAATACATTTCATTTTGACAGCACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTACTAAAGGCTGCAAAACTAAAATACATTTCATTTTGACAGCACA  371

seq1  TCGGGGGTTGAGAGTCTGCACAGGGCCTAGTTGTAGGCTCCAGGTGGGGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGGTTGAGAGTCTGCACAGGGCCTAGTTGTAGGCTCCAGGTGGGGC  421

seq1  GTCTGGGTTGTTGCCGCAGCTGATCAATGAGGATGGAGGTTCTGGCAGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGGTTGTTGCCGCAGCTGATCAATGAGGATGGAGGTTCTGGCAGAG  471

seq1  AGGGTAAAGTGGGAGATGGATGTCAGGGAAACCATTCTCCTGGATTTTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAAAGTGGGAGATGGATGTCAGGGAAACCATTCTCCTGGATTTTCT  521

seq1  GTGGTTTTCATGGACCATTTTGTGGTTTGTTCACTGAGGGAATTTGGTAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTCATGGACCATTTTGTGGTTTGTTCACTGAGGGAATTTGGTAC  571

seq1  TGATAAGACATAGTCCTCGTCATTCAGAGAGTTAAGCCGTTTGAGTTCTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGACATAGTCCTCGTCATTCAGAGAGTTAAGCCGTTTGAGTTCTA  621

seq1  AGACCAATATAATTCAGGGCAACAAATAGAACTGAGGACACTGCTGGCCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAATATAATTCAGGGCAACAAATAGAACTGAGGACACTGCTGGCCC  671

seq1  AGAACAGGGCATGATCTGGGAGGACTTTCTGAACCTGGGAGCATCTCCAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGGGCATGATCTGGGAGGACTTTCTGAACCTGGGAGCATCTCCAT  721

seq1  AAGGTTTTAAGGAGATGTGAAGAGAGGCTGTGGTAGGGAAGGATCTCTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTTAAGGAGATGTGAAGAGAGGCTGTGGTAGGGAAGGATCTCTCC  771

seq1  ATATTCCAGTGGTCCTTTGAAAAGTAATGGATGGCAAGATGCCCAATATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCAGTGGTCCTTTGAAAAGTAATGGATGGCAAGATGCCCAATATA  821

seq1  TTTCCCACTGTGATGTGTCTTGTTTGGGGCAGTGAAGGCACACAGTGAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCACTGTGATGTGTCTTGTTTGGGGCAGTGAAGGCACACAGTGAGA  871

seq1  ATTCCTGTCTGTGTCAGAAAAAGCCTAGAGTCACTTGTCTTTCCTGTATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGTCTGTGTCAGAAAAAGCCTAGAGTCACTTGTCTTTCCTGTATT  921

seq1  AATAAAGATGCTTTTGCTTTTAGAGGACAGATGGAGTAAATCTATTTTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGATGCTTTTGCTTTTAGAGGACAGATGGAGTAAATCTATTTTCT  971

seq1  TTTAAAAATATTTCTACAAAAGTTGAGTAGTTCTTTTTTAAAAGTTGAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATATTTCTACAAAAGTTGAGTAGTTCTTTTTTAAAAGTTGAAC  1021

seq1  CAATTTGGAAAATGAGCATTTTAAGTGAAAACAGAATATATTAAAGGTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGGAAAATGAGCATTTTAAGTGAAAACAGAATATATTAAAGGTTT  1071

seq1  GGTGTAAACAGCAATAAGTAGCTTGCCTTGGCAGGCATGTCTCTGTGAGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAAACAGCAATAAGTAGCTTGCCTTGGCAGGCATGTCTCTGTGAGG  1121

seq1  TGGCAGAAGGTATTTGTGGTTCCTTGTTTCATTAAATACTGTTATTTCAA  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAAGGTATTTGTGGTTCCTTGTTTCATTAAATACTGTTATTTCAA  1171

seq1  AGAATTC  1205
      |||||||
seq2  AGAATTC  1178