BAC Information

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BAC

Clone NameB6Ng01-097H01
Chromosome15 (Build37)
Map Location 50,956,056 - 51,097,192
singlet/doubletdoublet
Overlap genenone
Upstream geneTrps1, LOC100039644
Downstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard, LOC100039720, LOC665219
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097H01.bB6Ng01-097H01.g
ACCDH907817DH907818
length1,0831,007
definitionDH907817|Mus musculus domesticus DNA, BAC clone: B6Ng01-097H01, 5' end.DH907818|Mus musculus domesticus DNA, BAC clone: B6Ng01-097H01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,096,113 - 51,097,192)(50,956,056 - 50,957,064)
sequence
gaattcaatgaaaatgtcttcccttaagggcagtgactgatgaagttgag
ttgaagattaaataatgattttgttctctttactaatttttattaagatg
gacattcttggtctcttcaaggcgaaaagtctgtgatttctccaagtaca
agggaaaagactgtcatcatcaaatgaagttgtcagttggggtaattatt
actctgaagtcaaactacaaatatttgctaatcttaggatagtaacctgc
ctcattgggtatatactattccagtttttcctgtgtgtatggtagtttct
catgtctgtaaatttatactttgacttttagatttatatcagaattaatt
tagattcttcatttttataaatgtcttataggttgaacatgttaccagaa
cagcaacagtaataaaaccttcactttccaaggacgtgtatagaaatctg
cagtgcttcagagaagatggaggcatgcataagattctgttttgtgctgc
agcttccagaagaatattagcataagactcaactccagctttgtctcact
ataaccccaaggttccagggagctgtccaagtctgttgaaacccactttt
tacaatgcatttttctctattttctttgtgtttgccaaaatgaacaaaac
tgatttttgtcagctgtcaagtggagcaagatgtcagacgggaggtgggg
gaagcttttccatacattcaattcttgtaacaaaaacaaacgattagacc
attggttgtctgctccaggagaggtttatatttccaaaatttgcatcgca
cactccctaacgaagcagatttggaagcagtgctaaagtcaacaggaagg
ctgggcagttttgctttgattcggatggagccaataagcttttggcacct
tgaagaacagcagcctgaaattctaagtctttagcatgggccttcctctt
agtggtatcaagtgattgttacaggctttcttggcatttcctgctgaatg
gtgggatggctgttgttatatttcttaggttatgtttgaagatggagtag
gcagccagaatgtaagttttgcaatcacttacc
gaattcagtttggagagggaacacttactcaattggttttcaaatagata
aatttattaaggtgggcaaaaaaatgaagaaacaaaatattagccaaaaa
ggacatggcttatagtttaaaatgttgtaatagtattagtctctttttaa
ataatagtcgtgactgtaaaaatagactttttaaaaatacaatttataat
caaagttaagaatacttgttctcttcattttgttatatgcttgttgattc
cacttggaataatggatccatattgattgaggtaatatcatccataagta
gagtacagatctagattcagaaacaatcttttaaactcttatgtaaaact
taaagtacaaaaacaactgtttcacaaaattatgaaaccattataacttt
gttgaccaaccaccaaatcctattcagactctaggaataatttgaaaaat
tttttacctatattgattttccaacgaacaactcatatatgtttaaaaac
aactgaagaatgaaagggtagtacattggggtttggtgctcataattgtg
ttaatactttttaaaatatgtctccacttgaatgttgatcagtgctcaca
ccatataaagaatggtaagcataatttgcaaaatgtttggcccactttca
aacatttctagtgatttgatttccccagggtaaatgtagaaatctttagc
aatctggtatgtgttagcatttttggtcagagatcacggcagccgtaaca
ctccaccacagggataaaactccacacccataggagatgcaaattgactg
gaaaatggcaatttagcacagaagcaattgatatattcaaatcaccattt
acacatttgcctgtggctgcccacactggagcttcacctgcagcaagtgc
tgctttcctgcccagcatggatcaaatcttggttccttttgcatccaaag
actatacttaaggaatgcctcgttttctgggtggacacacaacctgattc
agatttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_51096113_51097192
seq2: B6Ng01-097H01.b_44_1126 (reverse)

seq1  GGTATAGTGATTGACAAAACTTACA-TCTGTGCTGCCTACTCACTC-TCA  48
      |||| |||||||| ||||||||||| |||| |||||||||||  || |||
seq2  GGTA-AGTGATTG-CAAAACTTACATTCTG-GCTGCCTACTCCATCTTCA  47

seq1  AACATAACCT-AGGAATATAACAACAGCCCATCCCACAATTCAGCAGGAA  97
      |||||||||| || ||||||||||||| ||||||||| ||||||||||||
seq2  AACATAACCTAAGAAATATAACAACAG-CCATCCCACCATTCAGCAGGAA  96

seq1  ATGCCAAGAAAGCCTGTTACAATCACTTGATACCACCTAAGAGGAAGG-C  146
      ||||||||||||||||| ||||||||||||||||| |||||||||||| |
seq2  ATGCCAAGAAAGCCTGTAACAATCACTTGATACCA-CTAAGAGGAAGGCC  145

seq1  CATGCTTAAGGACTTAGGATTTTCAGGCTGCTGTTC-TCAAGGTGCCAAA  195
      ||||| ||| |||||| || |||||||||||||||| |||||||||||||
seq2  CATGC-TAAAGACTTA-GAATTTCAGGCTGCTGTTCTTCAAGGTGCCAAA  193

seq1  AGCTTATTGGCTCCATCCGAATC-AAGCAAAACTG-CCAGCCTTCCTGTT  243
      ||||||||||||||||||||||| ||||||||||| ||||||||||||||
seq2  AGCTTATTGGCTCCATCCGAATCAAAGCAAAACTGCCCAGCCTTCCTGTT  243

seq1  GACTTTAGCACTGCTTCC-AATCTGCTTCGTTA-GGAGTGTGCGATGC-A  290
      |||||||||||||||||| |||||||||||||| |||||||||||||| |
seq2  GACTTTAGCACTGCTTCCAAATCTGCTTCGTTAGGGAGTGTGCGATGCAA  293

seq1  ATTTTGGAAATATAAACCTCTCCTGGAGCAGACAACCAATGGTCTAATCG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGAAATATAAACCTCTCCTGGAGCAGACAACCAATGGTCTAATCG  343

seq1  TTTGTTTTTGTTACAAGAATTGAATGTATGGAAAAGCTTCCCCCACCTCC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTGTTACAAGAATTGAATGTATGGAAAAGCTTCCCCCACCTCC  393

seq1  CGTCTGACATCTTGCTCCACTTGACAGCTGACAAAAATCAGTTTTGTTCA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTGACATCTTGCTCCACTTGACAGCTGACAAAAATCAGTTTTGTTCA  443

seq1  TTTTGGCAAACACAAAGAAAATAGAGAAAAATGCATTGTAAAAAGTGGGT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCAAACACAAAGAAAATAGAGAAAAATGCATTGTAAAAAGTGGGT  493

seq1  TTCAACAGACTTGGACAGCTCCCTGGAACCTTGGGGTTATAGTGAGACAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAGACTTGGACAGCTCCCTGGAACCTTGGGGTTATAGTGAGACAA  543

seq1  AGCTGGAGTTGAGTCTTATGCTAATATTCTTCTGGAAGCTGCAGCACAAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAGTTGAGTCTTATGCTAATATTCTTCTGGAAGCTGCAGCACAAA  593

seq1  ACAGAATCTTATGCATGCCTCCATCTTCTCTGAAGCACTGCAGATTTCTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATCTTATGCATGCCTCCATCTTCTCTGAAGCACTGCAGATTTCTA  643

seq1  TACACGTCCTTGGAAAGTGAAGGTTTTATTACTGTTGCTGTTCTGGTAAC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGTCCTTGGAAAGTGAAGGTTTTATTACTGTTGCTGTTCTGGTAAC  693

seq1  ATGTTCAACCTATAAGACATTTATAAAAATGAAGAATCTAAATTAATTCT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAACCTATAAGACATTTATAAAAATGAAGAATCTAAATTAATTCT  743

seq1  GATATAAATCTAAAAGTCAAAGTATAAATTTACAGACATGAGAAACTACC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAATCTAAAAGTCAAAGTATAAATTTACAGACATGAGAAACTACC  793

seq1  ATACACACAGGAAAAACTGGAATAGTATATACCCAATGAGGCAGGTTACT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACAGGAAAAACTGGAATAGTATATACCCAATGAGGCAGGTTACT  843

seq1  ATCCTAAGATTAGCAAATATTTGTAGTTTGACTTCAGAGTAATAATTACC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAAGATTAGCAAATATTTGTAGTTTGACTTCAGAGTAATAATTACC  893

seq1  CCAACTGACAACTTCATTTGATGATGACAGTCTTTTCCCTTGTACTTGGA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGACAACTTCATTTGATGATGACAGTCTTTTCCCTTGTACTTGGA  943

seq1  GAAATCACAGACTTTTCGCCTTGAAGAGACCAAGAATGTCCATCTTAATA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCACAGACTTTTCGCCTTGAAGAGACCAAGAATGTCCATCTTAATA  993

seq1  AAAATTAGTAAAGAGAACAAAATCATTATTTAATCTTCAACTCAACTTCA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAGTAAAGAGAACAAAATCATTATTTAATCTTCAACTCAACTTCA  1043

seq1  TCAGTCACTGCCCTTAAGGGAAGACATTTTCATTGAATTC  1080
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCACTGCCCTTAAGGGAAGACATTTTCATTGAATTC  1083

seq1: chr15_50956056_50957064
seq2: B6Ng01-097H01.g_70_1076

seq1  GAATTCAGTTTGGAGAGGGAACACTTACTCAATTGGTTTTCAAATAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTGGAGAGGGAACACTTACTCAATTGGTTTTCAAATAGATA  50

seq1  AATTTATTAAGGTGGGCAAAAAAATGAAGAAACAAAATATTAGCCAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTAAGGTGGGCAAAAAAATGAAGAAACAAAATATTAGCCAAAAA  100

seq1  GGACATGGCTTATAGTTTAAAATGTTGTAATAGTATTAGTCTCTTTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGGCTTATAGTTTAAAATGTTGTAATAGTATTAGTCTCTTTTTAA  150

seq1  ATAATAGTCGTGACTGTAAAAATAGACTTTTTAAAAATACAATTTATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGTCGTGACTGTAAAAATAGACTTTTTAAAAATACAATTTATAAT  200

seq1  CAAAGTTAAGAATACTTGTTCTCTTCATTTTGTTATATGCTTGTTGATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTAAGAATACTTGTTCTCTTCATTTTGTTATATGCTTGTTGATTC  250

seq1  CACTTGGAATAATGGATCCATATTGATTGAGGTAATATCATCCATAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGAATAATGGATCCATATTGATTGAGGTAATATCATCCATAAGTA  300

seq1  GAGTACAGATCTAGATTCAGAAACAATCTTTTAAACTCTTATGTAAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACAGATCTAGATTCAGAAACAATCTTTTAAACTCTTATGTAAAACT  350

seq1  TAAAGTACAAAAACAACTGTTTCACAAAATTATGAAACCATTATAACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTACAAAAACAACTGTTTCACAAAATTATGAAACCATTATAACTTT  400

seq1  GTTGACCAACCACCAAATCCTATTCAGACTCTAGGAATAATTTGAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACCAACCACCAAATCCTATTCAGACTCTAGGAATAATTTGAAAAAT  450

seq1  TTTTTACCTATATTGATTTTCCAACGAACAACTCATATATGTTTAAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACCTATATTGATTTTCCAACGAACAACTCATATATGTTTAAAAAC  500

seq1  AACTGAAGAATGAAAGGGTAGTACATTGGGGTTTGGTGCTCATAATTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGAATGAAAGGGTAGTACATTGGGGTTTGGTGCTCATAATTGTG  550

seq1  TTAATACTTTTTAAAATATGTCTCCACTTGAATGTTGATCAGTGCTCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACTTTTTAAAATATGTCTCCACTTGAATGTTGATCAGTGCTCACA  600

seq1  CCATATAAAGAATGGTAAGCATAATTTGCAAAATGTTTGGCCCACTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATAAAGAATGGTAAGCATAATTTGCAAAATGTTTGGCCCACTTTCA  650

seq1  AACATTTCTAGTGATTTGATTTCCCCAGGGTAAATGTAGAAATCTTTAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTCTAGTGATTTGATTTCCCCAGGGTAAATGTAGAAATCTTTAGC  700

seq1  AATCTGGTATGTGTTAGCA-TTTTGGTCAGAGATCACGGCAGCCGTAACA  749
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AATCTGGTATGTGTTAGCATTTTTGGTCAGAGATCACGGCAGCCGTAACA  750

seq1  CTCCACCACAGGGATAAAACTCCACACCCAGAGGAGATGCAGAATTGACT  799
      |||||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  CTCCACCACAGGGATAAAACTCCACACCCATAGGAGATGCA-AATTGACT  799

seq1  GG-AAATGGC-ATTTAGCACAGAAGCAATTGATATATTCAAATCAACCAT  847
      || ||||||| ||||||||||||||||||||||||||||||||| |||||
seq2  GGAAAATGGCAATTTAGCACAGAAGCAATTGATATATTCAAATC-ACCAT  848

seq1  TTAACACATTTGCCTGTGGCTGCCCACAGCTGGAGCTTCACCTGCAGCAA  897
      || ||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TT-ACACATTTGCCTGTGGCTGCCCACA-CTGGAGCTTCACCTGCAGCAA  896

seq1  GTGCTGC-TTCCTGCCCAGCATGGATCAAATCTTGGTCCCTTTTTGCATC  946
      ||||||| ||||||||||||||||||||||||||||| || |||||||||
seq2  GTGCTGCTTTCCTGCCCAGCATGGATCAAATCTTGGTTCC-TTTTGCATC  945

seq1  CAAAGACTATACATAAAGAAATGCCTCGTTTTCTGAGTGGACACACAACC  996
      |||||||||||| | ||| |||||||||||||||| ||||||||||||||
seq2  CAAAGACTATAC-TTAAGGAATGCCTCGTTTTCTGGGTGGACACACAACC  994

seq1  TGAATCAGATTTC  1009
      ||| |||||||||
seq2  TGATTCAGATTTC  1007