BAC Information

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BAC

Clone NameB6Ng01-098M13
Chromosome15 (Build37)
Map Location 24,746,403 - 24,747,516
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666989, LOC666999, LOC100040492, LOC100040499
Downstream geneLOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098M13.bB6Ng01-098M13.g
ACCDH908770DH908771
length1,0461,104
definitionDH908770|Mus musculus domesticus DNA, BAC clone: B6Ng01-098M13, 5' end.DH908771|Mus musculus domesticus DNA, BAC clone: B6Ng01-098M13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatattgaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcaggaaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattggaagcttgtacaaccactctggaaatcagtctggcgattcctca
gaaaattggacatagtactaccagagtctccctcaatacctctcctgggc
atatatccagaatatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcatcagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatggattcatgaaattcctaggcaa
atggatggacctggagggtatcatcctgagtgaggtaacccaatcacaat
ggacttcacacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgctaaacgcatgaaactcaa
gaagaagaaccaaaatgtagacactttaccccttcttagaattgggaaca
aaacactcatggaaggagttacagagacaaagtttggagctgttttgaaa
ggatggaccatctagagactgccatatctgggcatccatcccataatcag
cttccacacgctgacaccattgcatacactaacaagattttttctgaaag
gacacagatatagctgtctcttgtgagactatgccaggggcctagcaagc
acagaagtggatgctcacagtccgcttctgggatggatcacagggccgcc
aatggaggagcgagagaaagtacccaaagaggctgaaggtatctgcaacc
ctataggtggaaaacatttatgaactaaccagtaccccgtagtctt
gaattcacataaatgtattataggtgtgataacctatatgtaattccagt
cttgggaaggcaagggcaggaaatccctgtagaaactgtgtagtgagcct
agtttctagaaaattgtatttaaatgatactatctcaagaaataagaaca
ctaccagtacactaaacctgggtcttcacatgtatgtatacacatctatc
catccaggtgtgtctacctacacacaaaagtgtgttgagacacattcaac
catgcatatatatcttcactcttcaaatacacacacacacacacacacac
acacacacacacacactgtgcagggaagaacagaaatagacaatcaacat
tcaaattacatatagcatgacttgaataaccaccaagaactaaactgaag
ctctttacatttgcttgggaggacaaaatgtgaggactacaaatcttaat
tacacttttctttcatttaccaggaatacacatactggggtaaaaaataa
actctagactttcacagttcatccctcttaggtttatcttacagtttgat
acattcacaaaagaagccaggcttcttatgctcgccactaaagacatcta
aaacagctttcagagaaaggcatgcagggaaacaaaccagaaatgcctac
tgcctttaagaggtactctactgtgatgtgtaaaacataaagggcacagt
agagtagaccaagtgcagtttcacaaactttaatgacatagttgtagaga
gaggttttagttcagaggcagggggaggatttagtttatgacgccaaaca
tttgaatgcagaccaccgtgattgttcagagaagagttattggttggcaa
tttaaggttaaaatatttacagaattatttttttatcattgtagaacttc
tttacatttcctcctgacacataaaacaacccaatttcactaattttaaa
tttttcttctacagcctgatttttattaaagtttgctataactgatatgt
taaattctcatggatggtttaacttgtgggacttcaaaagttggatgcac
tgaatgttatggatgccttgggggaagagattaaaagcctgactcttttc
atat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_24746403_24747516
seq2: B6Ng01-098M13.g_68_1171 (reverse)

seq1  ATATAGAAAAGAAGTCAGGCTTCTTAATCTCTCCACCCAAGGCATCCATA  50
      |||| |||||| |||||||||| ||||||||| | |||||||||||||||
seq2  ATAT-GAAAAG-AGTCAGGCTT-TTAATCTCTTCCCCCAAGGCATCCATA  47

seq1  ACATTCAGTGACATTCAACTATTTGAAGTCTCACGAAGTTTAAACCATCC  100
      |||||||||| ||| ||||| ||||||||| ||| ||| |||||||||||
seq2  ACATTCAGTG-CATCCAACT-TTTGAAGTCCCAC-AAG-TTAAACCATCC  93

seq1  ATGAGAATTTAACATATCAGTTATAGCAAACTTTATATAAAATCAGGCTG  150
      |||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  ATGAGAATTTAACATATCAGTTATAGCAAACTTTAATAAAAATCAGGCTG  143

seq1  TAGAAGAAAAATTTAAAAATTAGTGAAATTGGGTTGTTTTATGTGTCAGG  200
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAGAAGAAAAATTT-AAAATTAGTGAAATTGGGTTGTTTTATGTGTCAGG  192

seq1  AGGAAATGTAAAGAAGTTCTACAATGATAAAAAAAATAATTCTGTAAATA  250
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGGAAATGTAAAGAAGTTCTACAATGAT-AAAAAAATAATTCTGTAAATA  241

seq1  TTTTAACCTTAAATTGCCAACCAATAACTCTTCTCTTGAACAATCACGGT  300
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTTTAACCTTAAATTGCCAACCAATAACTCTTCTC-TGAACAATCACGGT  290

seq1  GGTCTGCATTCAAATGTTTGGCGTCATAAACTAAATCCTCCCCCTGCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCATTCAAATGTTTGGCGTCATAAACTAAATCCTCCCCCTGCCTC  340

seq1  TGAACTAAAACCTCTCTCTACAACTATGTCATTAAAGTTTGTGAAACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTAAAACCTCTCTCTACAACTATGTCATTAAAGTTTGTGAAACTGC  390

seq1  ACTTGGTCTACTCTACTGTGCCCTTTATGTTTTACACATCACAGTAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTCTACTCTACTGTGCCCTTTATGTTTTACACATCACAGTAGAGT  440

seq1  ACCTCTTAAAGGCAGTAGGCATTTCTGGTTTGTTTCCCTGCATGCCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTAAAGGCAGTAGGCATTTCTGGTTTGTTTCCCTGCATGCCTTTC  490

seq1  TCTGAAAGCTGTTTTAGATGTCTTTAGTGGCGAGCATAAGAAGCCTGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAGCTGTTTTAGATGTCTTTAGTGGCGAGCATAAGAAGCCTGGCT  540

seq1  TCTTTTGTGAATGTATCAAACTGTAAGATAAACCTAAGAGGGATGAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTGAATGTATCAAACTGTAAGATAAACCTAAGAGGGATGAACTG  590

seq1  TGAAAGTCTAGAGTTTATTTTTTACCCCAGTATGTGTATTCCTGGTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTCTAGAGTTTATTTTTTACCCCAGTATGTGTATTCCTGGTAAAT  640

seq1  GAAAGAAAAGTGTAATTAAGATTTGTAGTCCTCACATTTTGTCCTCCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAAGTGTAATTAAGATTTGTAGTCCTCACATTTTGTCCTCCCAA  690

seq1  GCAAATGTAAAGAGCTTCAGTTTAGTTCTTGGTGGTTATTCAAGTCATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGTAAAGAGCTTCAGTTTAGTTCTTGGTGGTTATTCAAGTCATGC  740

seq1  TATATGTAATTTGAATGTTGATTGTCTATTTCTGTTCTTCCCTGCACAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTAATTTGAATGTTGATTGTCTATTTCTGTTCTTCCCTGCACAGT  790

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGAAGAGTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGAAGAGTGAA  840

seq1  GATATATATGCATGGTTGAATGTGTCTCAACACACTTTTGTGTGTAGGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATATGCATGGTTGAATGTGTCTCAACACACTTTTGTGTGTAGGTA  890

seq1  GACACACCTGGATGGATAGATGTGTATACATACATGTGAAGACCCAGGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACCTGGATGGATAGATGTGTATACATACATGTGAAGACCCAGGTT  940

seq1  TAGTGTACTGGTAGTGTTCTTATTTCTTGAGATAGTATCATTTAAATACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTACTGGTAGTGTTCTTATTTCTTGAGATAGTATCATTTAAATACA  990

seq1  ATTTTCTAGAAACTAGGCTCACTACACAGTTTCTACAGGGATTTCCTGCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTAGAAACTAGGCTCACTACACAGTTTCTACAGGGATTTCCTGCC  1040

seq1  CTTGCCTTCCCAAGACTGGAATTACATATAGGTTATCACACCTATAATAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTTCCCAAGACTGGAATTACATATAGGTTATCACACCTATAATAC  1090

seq1  ATTTATGTGAATTC  1114
      ||||||||||||||
seq2  ATTTATGTGAATTC  1104