BAC Information

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BAC

Clone NameB6Ng01-099F11
Chromosome15 (Build37)
Map Location 67,550,516 - 67,690,365
singlet/doubletdoublet
Overlap genenone
Upstream geneTg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
Downstream geneZfat1, LOC100041000, EG665945
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099F11.bB6Ng01-099F11.g
ACCDH909160DH909161
length404927
definitionDH909160|Mus musculus domesticus DNA, BAC clone: B6Ng01-099F11, 5' end.DH909161|Mus musculus domesticus DNA, BAC clone: B6Ng01-099F11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,550,516 - 67,550,919)(67,689,434 - 67,690,365)
sequence
gaattcctgaatttacatcaaggcagccttcttacactcatccttcaggt
cccaggcaaaagtgacactaaatagagctctcagattcttagtcaccaac
caggtaccatggagaacaagagcaaatattgtgtggaacaacttggcctt
ctgaagggaaaagagaagagatggctgagagcaggaaataatgctattaa
aaagaaagatatacagagtgctacttgagcatagacaccatgtgtatatg
tgctggaggagaggaaggaaggtgaaattacctcagagaatgcttcatat
gaagaatgaatatatataaggcaagttctaaaatatgaatagttctttga
cttgttttgcatgttggggtggggaggcttatatataaggcattgtctta
ttaa
gaattctgttaccaagcacatcccagtaactctcagggtgctgcttttaa
tccttcaaacctatgtatggcaaaaaaaatgaagggatagaaaaaagtta
ctaatatggaactatagaactatcaggtatttattcttatggtatatact
aatatatcttcaaaggaaagctaggagaaggaatatcactctatgggatc
agaaaaggaagggtgtgactcaagagaagatgatggtgaagaaacagaga
aagacagtgtgatggacaggcaagaaactatgcacagagcttcagaaggg
aacaccaccctttatgcatattcaacatcttaggatatggcctatcatct
gcatgtaataaaatatatgaaaattgcataggtacatatatgcacaaata
tatttattcatttttatgtagtatatacataatagatagtcatagtaata
atatcatagcaacaggcatatgtttttttccttttcatatactcttcttt
taattttttattttattttattttaattaggtattttcttcatttacatt
tccaatgttatcccaaaagtcccccataccctcacccccccccactcttt
ctacctacccactccctcttcttggccctggcgtttcccctgtaccgagg
catataaagttttgcaagaccaatgggcctctctttccaatgatggccaa
ctaggccatctttctgatacatatgcagcttgagacatgagctccggggg
gtactggttagtttcatattgttattccacctataggattgcagacccct
tttagctccttggtactttctccaggtatttctttacatgtatttgcttt
ggtttgctggatggaatccattctctcctctgccgtaatttggttcttta
aaacatatggacagaaatacttacact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_67550516_67550919
seq2: B6Ng01-099F11.b_45_448

seq1  GAATTCCTGAATTTACATCAAGGCAGCCTTCTTACACTCATCCTTCAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAATTTACATCAAGGCAGCCTTCTTACACTCATCCTTCAGGT  50

seq1  CCCAGGCAAAAGTGACACTAAATAGAGCTCTCAGATTCTTAGTCACCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCAAAAGTGACACTAAATAGAGCTCTCAGATTCTTAGTCACCAAC  100

seq1  CAGGTACCATGGAGAACAAGAGCAAATATTGTGTGGAACAACTTGGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACCATGGAGAACAAGAGCAAATATTGTGTGGAACAACTTGGCCTT  150

seq1  CTGAAGGGAAAAGAGAAGAGATGGCTGAGAGCAGGAAATAATGCTATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGGAAAAGAGAAGAGATGGCTGAGAGCAGGAAATAATGCTATTAA  200

seq1  AAAGAAAGATATAGAGAGTGCTACTTGAGCATAGACACCATGTGTATATG  250
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGATATACAGAGTGCTACTTGAGCATAGACACCATGTGTATATG  250

seq1  TGCTGGAGGAGAGGAAGGAAGGTGAAATTACCTCAGAGAATGCTTCATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAGGAGAGGAAGGAAGGTGAAATTACCTCAGAGAATGCTTCATAT  300

seq1  AAGGAATGAATATATATAAGGCAAGTTCTAAAATATGAATAGTTCTTTGA  350
       | |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGAATATATATAAGGCAAGTTCTAAAATATGAATAGTTCTTTGA  350

seq1  CTTGTTTTGCATGTTGGGGTGGGGAGGCTTATATATAAGGTATTGTATTA  400
      |||||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  CTTGTTTTGCATGTTGGGGTGGGGAGGCTTATATATAAGGCATTGTCTTA  400

seq1  TTAA  404
      ||||
seq2  TTAA  404

seq1: chr15_67689434_67690365
seq2: B6Ng01-099F11.g_71_997 (reverse)

seq1  AGTGTTAAGTATTTTCTGTCCAATATTGTTTTTAAAGGAACCAAAATACG  50
      |||| |||||| ||||||||| ||| ||||||  || |||||||| ||||
seq2  AGTG-TAAGTA-TTTCTGTCC-ATA-TGTTTT--AAAGAACCAAATTACG  44

seq1  GCAGAAGGAGAGAATGGAATCCAATCCAGCAAAACCAAAGGCAAATACAT  100
      |||| ||||||||||||| ||| ||||||| |||||||| ||||||||||
seq2  GCAG-AGGAGAGAATGGATTCC-ATCCAGC-AAACCAAA-GCAAATACAT  90

seq1  GTAAAGAAATACCTGGAGAAAGTACCCAAGGAGCT-AAAGGGGTCTGCAA  149
      |||||||||||||||||||||||| |||||||||| ||||||||||||||
seq2  GTAAAGAAATACCTGGAGAAAGTA-CCAAGGAGCTAAAAGGGGTCTGCAA  139

seq1  TCCTATAGGTGGAATAACAATATG-AACTAACCAGTACCCCCCGGAGCTC  198
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCCTATAGGTGGAATAACAATATGAAACTAACCAGTACCCCCCGGAGCTC  189

seq1  ATGTCTCAAGCTGCATATGTATCAG-AAGATGGCCTAGTTGGCCATCATT  247
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATGTCTCAAGCTGCATATGTATCAGAAAGATGGCCTAGTTGGCCATCATT  239

seq1  GGAAAGAGAGGCCCATTGGTCTTGC-AAACTTTATATGCCTCGGTACAGG  296
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGAAAGAGAGGCCCATTGGTCTTGCAAAACTTTATATGCCTCGGTACAGG  289

seq1  GG-AACGCCAGGGCCAAGAAGAGGGAGTGGGTAGGTAG-AAGAGTGGGGG  344
      || ||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGAAACGCCAGGGCCAAGAAGAGGGAGTGGGTAGGTAGAAAGAGTGGGGG  339

seq1  GGGGTGAGGGTATGGGGGACTTTTGGGATAACATTGGAAATGTAAATGAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGAGGGTATGGGGGACTTTTGGGATAACATTGGAAATGTAAATGAA  389

seq1  GAAAATACCTAATTAAAATAAAATAAAATAAAAAATTAAAAGAAGAGTAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATACCTAATTAAAATAAAATAAAATAAAAAATTAAAAGAAGAGTAT  439

seq1  ATGAAAAGGAAAAAAACATATGCCTGTTGCTATGATATTATTACTATGAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGGAAAAAAACATATGCCTGTTGCTATGATATTATTACTATGAC  489

seq1  TATCTATTATGTATATACTACATAAAAATGAATAAATATATTTGTGCATA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATTATGTATATACTACATAAAAATGAATAAATATATTTGTGCATA  539

seq1  TATGTACCTATGCAATTTTCATATATTTTATTACATGCAGATGATAGGCC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACCTATGCAATTTTCATATATTTTATTACATGCAGATGATAGGCC  589

seq1  ATATCCTAAGATGTTGAATATGCATAAAGGGTGGTGTTCCCTTCTGAAGC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTAAGATGTTGAATATGCATAAAGGGTGGTGTTCCCTTCTGAAGC  639

seq1  TCTGTGCATAGTTTCTTGCCTGTCCATCACACTGTCTTTCTCTGTTTCTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCATAGTTTCTTGCCTGTCCATCACACTGTCTTTCTCTGTTTCTT  689

seq1  CACCATCATCTTCTCTTGAGTCACACCCTTCCTTTTCTGATCCCATAGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCATCTTCTCTTGAGTCACACCCTTCCTTTTCTGATCCCATAGAG  739

seq1  TGATATTCCTTCTCCTAGCTTTCCTTTGAAGATATATTAGTATATACCAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTCCTTCTCCTAGCTTTCCTTTGAAGATATATTAGTATATACCAT  789

seq1  AAGAATAAATACCTGATAGTTCTATAGTTCCATATTAGTAACTTTTTTCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAAATACCTGATAGTTCTATAGTTCCATATTAGTAACTTTTTTCT  839

seq1  ATCCCTTCATTTTTTTTGCCATACATAGGTTTGAAGGATTAAAAGCAGCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTCATTTTTTTTGCCATACATAGGTTTGAAGGATTAAAAGCAGCA  889

seq1  CCCTGAGAGTTACTGGGATGTGCTTGGTAACAGAATTC  932
      ||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGAGTTACTGGGATGTGCTTGGTAACAGAATTC  927