BAC Information

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BAC

Clone NameB6Ng01-100G15
Chromosome15 (Build37)
Map Location 18,410,209 - 18,549,560
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040162, LOC666835, LOC666839
Downstream geneCdh10, EG666857, EG666875, LOC621884
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100G15.bB6Ng01-100G15.g
ACCDH909920DH909921
length5551,055
definitionDH909920|Mus musculus domesticus DNA, BAC clone: B6Ng01-100G15, 5' end.DH909921|Mus musculus domesticus DNA, BAC clone: B6Ng01-100G15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,410,209 - 18,410,769)(18,548,481 - 18,549,560)
sequence
tctaaattttagattttacgaatgagaagtttcaagaacaataattgcat
aataaaattcatgtgaccatggtatgaaatatgtgtattgccttaaaagt
tgactagagtgcagtggtaaactgccctaaaatgtcttacaattcaagtt
aatatactagattcccagcttccaaacgctgacaccattgcatacactag
caagattttgctgaaaggacccatatagctgtctcttgtgagactatgcc
ggggcctagcaaacacagaagtggatgctcacagtcagctattggatgga
tcatagggctcccaatggaggagctagagaaagtagccaaggaactaaag
ggaactgcaaccctataggtggaacaacattatgaactaaccagtacccc
ggagctcttgactctagctgcatatgtatcaaaagatggcctagtcggcc
atcactggaaagagaggcccattggacttgcaaactttatatgccccagt
acaggggaacgaacgccagggccaaaaagtgggagtgggtgggagggtat
gtgtg
gaattcctgagagaaagtagtttcatcttttaatagatgcagttctacct
gatcctgatctttacaaaaaaaaaaaaaaaaaaaaaactaaagaaagcat
agaagtagctatgattggaattggccttacccatctccctgattatgagg
atagctttcaatctttcttcaaagataccaaacttactagcctcagaatt
gttcatttatatttgtatccaataatcttacttggatcagcttgggagaa
gagagtaaatgagactgaaaagatagctaacaggcagggaaattgtatcc
taaagtaattatccctgcttctatctaaactgcatgaaagtcacttacta
tagtttaggcaaaatctagtcccttcctacttgattgtgagggcctttcc
attatgctagcaggttcttcagagctatgtctttacagtaattttctcag
gaacgagtttgtatccttggtctgaagttctttttccttgggtgtttcaa
gcacatagaatttacaaatgatatacacagcaacagaattaagcccacat
ttattttcactcaatggaaagaaaaaaagcaagttactggctcttgcctt
aagcacttaatatgaaatatttatcatttactactgtttttttttccttt
tattgggtattttctttattttcattttaaatgttttcgtctttccatgt
ctcccctccagaaactccctatcccaatccccttccccctgcttctatga
gggtgctcccccgtccacctgcccactctagtcttccctccctggcattc
ccctacactgggcatcaacaccctcaggcccaagggcatctcctcccatt
gatgtccaacaagtatatcctctaccacagatgcagccagagccatgggg
gccatgtgtactctttcgcgggagccctggggaagtctggtccatgacac
tgtgctctctgggggctacaaaacccctcagctcttcagtccctctcact
ctgtgttaacaggacatccatgctaaaatcaagggtcttaggaaagatac
ctctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_18410209_18410769
seq2: B6Ng01-100G15.b_48_608

seq1  GAATTCTCTAAATTTTAGATTTTACGAATGAGAAGTTTCAAGAACAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAAATTTTAGATTTTACGAATGAGAAGTTTCAAGAACAATAA  50

seq1  TTGCATAATAAAATTCATGTGACCATGGTATGAAATATGTGTATTGCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATAATAAAATTCATGTGACCATGGTATGAAATATGTGTATTGCCTT  100

seq1  AAAAGTTGACTAGAGTGCAGTGGTAAACTGCCCTAAAATGTCTTACAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTGACTAGAGTGCAGTGGTAAACTGCCCTAAAATGTCTTACAATT  150

seq1  CAAGTTAATATACTAGATTCCCAGCTTCCAAACGCTGACACCATTGCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTAATATACTAGATTCCCAGCTTCCAAACGCTGACACCATTGCATA  200

seq1  CACTAGCAAGATTTTGCTGAAAGGACCCATATAGCTGTCTCTTGTGAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCAAGATTTTGCTGAAAGGACCCATATAGCTGTCTCTTGTGAGAC  250

seq1  TATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTG  300

seq1  GATGGATCATAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATCATAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAA  350

seq1  CTAAAGGGAACTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGGAACTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAG  400

seq1  TACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAG  450

seq1  TCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGC  500

seq1  CCCAGTACAGGGGAACGAACGCCAGGGCCAAAAAGTGGGAGTGGGTGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTACAGGGGAACGAACGCCAGGGCCAAAAAGTGGGAGTGGGTGGGA  550

seq1  GGGTATGTGTG  561
      |||||||||||
seq2  GGGTATGTGTG  561

seq1: chr15_18548481_18549560
seq2: B6Ng01-100G15.g_68_1122 (reverse)

seq1  AAGAGGTATCCTATCCTTAAGGAACCCCTTTGAATTTTTAGCACTGGGAT  50
      ||||||||| || ||| ||||  ||||  ||||  ||||||||   ||||
seq2  AAGAGGTAT-CTTTCC-TAAG--ACCC--TTGA--TTTTAGCA--TGGAT  40

seq1  GTTCCTGTTAAACAACAGGAGTTGGAGAAGGGACTGAAGGAGCTGAGGGG  100
      | |||||||||   ||| ||||  ||| |||||||||| ||||||| |||
seq2  G-TCCTGTTAA--CACA-GAGT--GAG-AGGGACTGAA-GAGCTGA-GGG  81

seq1  GTTTTGTAGCCCCACAGAAGAAGCAACAGTGTCAATGGACCAGACTTCCC  150
      ||||||||||||| ||||   ||| |||||||| ||||||||||||||||
seq2  GTTTTGTAGCCCC-CAGA--GAGC-ACAGTGTC-ATGGACCAGACTTCCC  126

seq1  CAGGGCTCCCGGCGAAAGAGTACACATGGCCCCCATGGCTCTGGCTGCAT  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTCCC-GCGAAAGAGTACACATGGCCCCCATGGCTCTGGCTGCAT  175

seq1  CTGTGGTAGAGGATATACTTGTTGGACATCAATGGGAGGAGATGCCCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTAGAGGATATACTTGTTGGACATCAATGGGAGGAGATGCCCTTG  225

seq1  GGCCTGAGGGTGTTTGATGCCCAGTGTAGGGGAATGCCAGGGAGGGAAGA  300
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGCCTGAGGGTG-TTGATGCCCAGTGTAGGGGAATGCCAGGGAGGGAAGA  274

seq1  CTAGAGTGGGCAGGTGGACGGGGGAGCACCCTCATAGAAGCAGGGGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTGGGCAGGTGGACGGGGGAGCACCCTCATAGAAGCAGGGGGAAG  324

seq1  GGGATTGGGATAGGGAGTTTCTGGAGGGGAGACATGGAAAGACGAAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTGGGATAGGGAGTTTCTGGAGGGGAGACATGGAAAGACGAAAACA  374

seq1  TTTAAAATGAAAATAAAGAAAATACCCAATAAAAGGAAAAAAAAACAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATGAAAATAAAGAAAATACCCAATAAAAGGAAAAAAAAACAGTA  424

seq1  GTAAATGATAAATATTTCATATTAAGTGCTTAAGGCAAGAGCCAGTAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGATAAATATTTCATATTAAGTGCTTAAGGCAAGAGCCAGTAACT  474

seq1  TGCTTTTTTTCTTTCCATTGAGTGAAAATAAATGTGGGCTTAATTCTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTTTCTTTCCATTGAGTGAAAATAAATGTGGGCTTAATTCTGTT  524

seq1  GCTGTGTATATCATTTGTAAATTCTATGTGCTTGAAACACCCAAGGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTATATCATTTGTAAATTCTATGTGCTTGAAACACCCAAGGAAAA  574

seq1  AGAACTTCAGACCAAGGATACAAACTCGTTCCTGAGAAAATTACTGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTCAGACCAAGGATACAAACTCGTTCCTGAGAAAATTACTGTAAA  624

seq1  GACATAGCTCTGAAGAACCTGCTAGCATAATGGAAAGGCCCTCACAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGCTCTGAAGAACCTGCTAGCATAATGGAAAGGCCCTCACAATCA  674

seq1  AGTAGGAAGGGACTAGATTTTGCCTAAACTATAGTAAGTGACTTTCATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGAAGGGACTAGATTTTGCCTAAACTATAGTAAGTGACTTTCATGC  724

seq1  AGTTTAGATAGAAGCAGGGATAATTACTTTAGGATACAATTTCCCTGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGATAGAAGCAGGGATAATTACTTTAGGATACAATTTCCCTGCCT  774

seq1  GTTAGCTATCTTTTCAGTCTCATTTACTCTCTTCTCCCAAGCTGATCCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTATCTTTTCAGTCTCATTTACTCTCTTCTCCCAAGCTGATCCAA  824

seq1  GTAAGATTATTGGATACAAATATAAATGAACAATTCTGAGGCTAGTAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATTATTGGATACAAATATAAATGAACAATTCTGAGGCTAGTAAGT  874

seq1  TTGGTATCTTTGAAGAAAGATTGAAAGCTATCCTCATAATCAGGGAGATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATCTTTGAAGAAAGATTGAAAGCTATCCTCATAATCAGGGAGATG  924

seq1  GGTAAGGCCAATTCCAATCATAGCTACTTCTATGCTTTCTTTAG-TTTTT  999
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGTAAGGCCAATTCCAATCATAGCTACTTCTATGCTTTCTTTAGTTTTTT  974

seq1  TTTTTTTTTTTTTTTTGTAAAGATCAGGATCAGGTAGAACTGCATCTATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTGTAAAGATCAGGATCAGGTAGAACTGCATCTATT  1024

seq1  AAAAGATGAAACTACTTTCTCTCAGGAATTC  1080
      |||||||||||||||||||||||||||||||
seq2  AAAAGATGAAACTACTTTCTCTCAGGAATTC  1055