MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-100K03
Chromosome	15 (Build37)
Map Location	48,902,242 - 48,903,432
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Csmd3, EG665146
Downstream gene	LOC100039600, LOC100039539, LOC665160
Link	Open Mouse BAC browser

Click to get alignment info.

name	Csmd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239420 MGI:2386403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665146 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665146 MGI:3643004
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins pseudo : _no_value

name	LOC100039600 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039600
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039539 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039539
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC665160 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Csmd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487116 GeneID:239420 MGI:2386403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CUB and Sushi multiple domains 3 transcript_id : NM_001081391.1

name	Csmd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487117 GeneID:239420 MGI:2386403
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 product : CUB and Sushi multiple domains 3 protein_id : NP_001074860.1

name	LOC100039600 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039600
definition	number : 1 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 1 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 2 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 3 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 4 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 5 pseudo : _no_value

name	LOC100039539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039539
definition	number : 6 pseudo : _no_value

name	LOC665160 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665160
definition	number : 1 pseudo : _no_value

name	LOC665160 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665160
definition	number : 2 pseudo : _no_value

name	EG665146 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149266578 GeneID:665146 MGI:3643004
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins product : predicted gene, EG665146 pseudo : _no_value transcript_id : XR_035659.1

clone name	MSMg01-145N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116P10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-348M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522P14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-354H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258P15
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-100K03.b	B6Ng01-100K03.g
ACC	DH910071	DH910072
length	1,049	1,161
definition	DH910071\|Mus musculus domesticus DNA, BAC clone: B6Ng01-100K03, 5' end.	DH910072\|Mus musculus domesticus DNA, BAC clone: B6Ng01-100K03, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctccaaaaaaaaatttaagttttgagaattgtcttggctattctg ggcttttcctttttacgtatgaagttgagaattattctttcaactattct ttcaatgtctgtagaataatgtattggaattttgaggataattgcattga atttccattttcactatgttaatcctactaatccatgagcttgggagatc ttaccatcttctgaggtgttctttgatttcttttttcaggaatttggtgt tcttttcatgcagatcttccatttgcttggttaaaggtgcatcaagatac tttataaaacttgtggctgtagtaaacggtgttgtttccataatttcttt ctctgctcacttatcatatgtgtgaaggaaggctattgatttcattgagt taattttatattcagccactttattgaagctgtttattagctgtaagatt tatctgatataattttgatgatctcttatgtatactatcatatcttctga gaaaaatgatatattgacttctttctttcaagttcaaattctcttgatct tttgttttcttactgctgtagctaaaactccaagtaatgtgtaagtagac aggaagagagtaggcagccttgtcttgtctctgactttagtgagaccttt tcaatttctctccatttagtgggatatgggttattggctggctgtatatt gcttttattaggtttaggcatgattattgaattgataatctttccaagac ttttaacatgatgggatgttggattttgtcaaaggccttttcagtatcta atgagattatcgtgtgttttttcttttttttctttcagtttgtttatgtg gtggattacgttgctggattttcatgtaatgaatcattcctgaatgtcta gcatgaatcctgcttgattgtgatgaatgatgtattttatgtattcctgg gatttagtttgggaagattttatttaggtttttttttgtttgattgtttg gtgctgatgtctctggaggttcttatcgaaggagtttccagtgaatggg	gaattcatagctgtctgcttaaatactatttcaagaattttggaaaactt actcaggaaacatgttccccttctacgtgatctacctgtttactcccctt aggtgaagtcaccaatttctgttgcaaagtttacatcctttattttcttt taggatttcagtaatacaagtgatacattttcccaggacatttgcatagg aaatatgactcagataaagaaataacacatagttttctgtctttggtcta gaatttgaaaggatgtaaatggctttgttatcttccaaaatgatttgaag ttaaagaactgaacaagaacattaaaacaggataattgagagagattttt acaagtttatttgttataccattacatgcaatttagaaataataacaagc tctaatgaagagaaactgctaagaggctgaagttacatgaagataatctc agatgcagaaggaaaaaacagggataaataacaccaaaggttttgtaaat ctcagagaattatattatgtttatttaaaatacttatgcacacatataca catccatgtgcacaaatacacacacatttatgcacacactcccatgtgca caaatacacacacatttatacacacactcccatgtactcccatgcacaca cacacacacacacacacacacacacacgtgcacacacacacagtgtcata cacatcctctctcctcacaagtaacattacttagggtgaaaatgaaatga actatcacacaaaaaccccactgccaggcatgggaaagtgccagtcacac tgttgttcagggaagactgagacctccaagacaatacacattattgatgg tgttcttggtgattcccagacaaaaaagtaaggcaaccctattgctgatg gaaccaaataggactttcagaaattcatctgcatctactgcgtaagcttc tttctgagactagttcttatagtataggagggagatgctggctttttctg actcctgctccatgggatcaaacacagctgataactaggagcacaatcct gagccctcccactctttgactttccagcagatgtatgtgctcctaactgt gacaacataactcatctctttaaagtgatgacaccgaatgagttcaacac acatagtcaaa
quality values	Open. Hide. 37 34 17 38 61 61 61 61 38 14 61 61 61 61 50 50 61 43 31 31 55 61 47 47 61 23 13 9 8 12 11 20 18 14 18 19 40 52 55 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 39 45 35 30 28 26 30 30 28 59 52 55 55 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 59 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 53 61 61 61 53 61 53 61 61 61 61 61 61 61 50 53 61 61 61 61 47 61 50 61 61 61 61 35 61 50 61 52 61 61 61 61 61 47 52 40 61 61 43 61 61 53 61 61 61 32 50 61 39 43 50 61 61 61 42 42 33 61 50 61 61 61 52 32 61 47 61 61 61 45 61 53 61 61 27 50 61 61 50 42 53 61 61 53 39 30 47 43 53 47 47 47 47 43 42 53 57 47 45 53 57 53 32 52 53 35 53 38 50 39 47 53 40 50 57 57 53 40 50 36 36 20 23 8 57 50 52 47 53 30 33 53 52 47 33 53 34 25 53 57 42 53 45 53 53 38 38 38 45 42 50 34 57 45 50 33 24 18 22 57 27 57 57 57 53 31 57 50 38 45 50 50 36 36 47 32 37 30 53 47 45 45 53 34 17 57 57 40 37 38 32 13 23 17 14 15 8 52 36 57 57 30 42 32 25 45 37 42 42 36 52 41 28 50 45 25 50 26 38 42 42 45 42 31 57 28 52 27 57 57 57 57 34 38 34 57 57 57 57 57 57 38 50 32 57 34 40 40 21 33 57 18 40 14 57 36 42 42 42 42 42 37 16 33 9 44 27 10 23 30 21 36 53 50 40 32 33 29 17 6 57 57 41 29 20 36 40 24 41 48 33 20 9 37 22 33 25 33 24 40 33 26 36 41 17 18 47 31 39 21 28 28 40 37 26 36 31 32 28 48 37 31 34 16 32 5 17 32 20 25 35 20 15 36 15 15 28 33 15 37 37 22 39 15 20 29 57 53 30 40 14 31 17 23 17 21 41 40 16 23 47 9 37 23 57 39 38 13 11 45 6 9 10 8 11 9 8 25 12 46 44 29 20 14 28 25 21 12 23 14 44 36 20 45 29 39 33 29 40 21 30 29 31 9 29 26 28 17 21 7 12 6 20 22 15 16 23 6 29 22 12 5 15 5 7 30 10 7 32 21 25 31 6 30 18 6 11 6 8 7 5 11 16 8 6 7 9 5 4 5 22 20 8 10 12 10 5 9 8 7	Open. Hide. 61 59 59 59 61 12 14 16 11 12 12 26 22 28 28 41 59 59 59 59 61 61 61 61 61 61 61 55 59 61 61 59 61 59 59 61 59 61 61 61 59 55 59 61 61 61 61 52 59 52 49 43 36 35 30 31 59 61 59 61 61 61 59 61 61 61 59 59 59 59 59 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 59 61 61 59 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 59 61 59 59 59 61 59 59 61 61 61 59 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 55 44 55 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 53 61 61 61 61 61 50 61 61 61 61 61 50 61 61 61 61 53 53 53 53 57 57 57 53 57 53 57 57 53 50 53 50 53 53 53 53 57 57 57 43 53 43 57 46 57 57 57 53 57 53 57 57 53 53 57 52 50 45 57 47 57 53 57 50 57 40 53 45 57 47 53 57 53 53 53 50 57 45 57 38 53 50 57 47 53 57 57 37 53 53 53 45 53 57 53 57 57 45 50 53 52 42 53 45 53 30 53 52 57 52 57 45 57 53 57 52 57 53 57 45 57 50 57 42 57 53 50 53 57 53 47 23 57 50 42 53 52 9 15 10 12 8 18 57 57 57 53 53 53 29 52 33 39 40 40 42 53 50 52 36 57 50 53 57 53 57 53 52 42 53 53 50 37 40 38 33 34 40 48 44 37 31 44 51 37 40 43 52 37 36 57 57 36 52 42 57 57 53 35 37 35 53 53 35 32 27 53 30 35 35 40 41 40 44 37 41 28 53 57 57 40 40 53 53 53 30 44 37 48 33 48 22 25 31 30 32 31 33 27 12 31 45 31 24 30 32 17 43 27 29 29 39 35 31 29 41 36 48 32 29 38 22 29 29 34 13 51 45 30 47 23 36 16 28 34 31 14 18 12 38 29 25 29 21 30 28 36 27 27 28 29 28 29 28 28 28 20 41 35 29 28 35 34 24 29 43 28 39 35 20 28 34 28 27 29 22 35 35 25 26 29 51 29 28 14 29 23 28 51 46 46 46 31 17 28 34 26 21 25 22 28 21 29 46 32 26 23 28 28 35 20 29 25 33 10 12 21 25 21 19 27 28 51 33 28 25 32 13 29 16 27 51 29 24 20 19 38 51 23 19 31 30 20 23 20 26 34 31 15 22 31 17 13 29 23 31 22 13 19 19 22 12 27 21 10 32 13 51 28 21 17 23 34 7 28 15 31 34 20 13 28 20 23 33 30 10 6 11 16 17 13 26 6 5 9 5 44 19 33 14 32 10 25 31 26 23 21 20 33 44 44 44 19 6 7 12 29 16 12 5 16 6 23 22 29 15 24 9 16 29 37 17 11 20 10 14 34 10 7 4 4 6 4 13 9 13 17 8 4 14 11 20 14 22 23 22 6 24 7 6 5 6 5 4 5 11 14 23 5 11 5 3 4 14 31 5 6 5 5 7 7 26 24 15 13 19 9 26 5 15 18 7 5 8 7 9 6 3 9 4 6 8 15 5 11 8 6 12 18 2 8 8 12 12 8 3 3 4 4 5 10 5 6 13 16 16 5 8 12 9 14 8 4 9 7 9 14 13 20 14 7 16 13 10 5 6 13 7 19 6 17 3 3 14 6 18 7 4 17 13 4 3 9 3 7 9 6 16 4 9 9 5 4 4 6 19 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr15_48902242_48903432
seq2: B6Ng01-100K03.g_69_1229

seq1  GAATTCATAGCTGTCTGCTTAAATACTATTTCAAGAATTTTGGAAAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGCTGTCTGCTTAAATACTATTTCAAGAATTTTGGAAAACTT  50

seq1  ACTCAGGAAACATGTTCCCCTTCTACGTGATCTACCTGTTTACTCCCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAAACATGTTCCCCTTCTACGTGATCTACCTGTTTACTCCCCTT  100

seq1  AGGTGAAGTCACCAATTTCTGTTGCAAAGTTTACATCCTTTATTTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAAGTCACCAATTTCTGTTGCAAAGTTTACATCCTTTATTTTCTTT  150

seq1  TAGGATTTCAGTAATACAAGTGATACATTTTCCCAGGACATTTGCATAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTTCAGTAATACAAGTGATACATTTTCCCAGGACATTTGCATAGG  200

seq1  AAATATGACTCAGATAAAGAAATAACACATAGTTTTCTGTCTTTGGTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGACTCAGATAAAGAAATAACACATAGTTTTCTGTCTTTGGTCTA  250

seq1  GAATTTGAAAGGATGTAAATGGCTTTGTTATCTTCCAAAATGATTTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGAAAGGATGTAAATGGCTTTGTTATCTTCCAAAATGATTTGAAG  300

seq1  TTAAAGAACTGAACAAGAACATTAAAACAGGATAATTGAGAGAGATTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAACTGAACAAGAACATTAAAACAGGATAATTGAGAGAGATTTTT  350

seq1  ACAAGTTTATTTGTTATACCATTACATGCAATTTAGAAATAATAACAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTTATTTGTTATACCATTACATGCAATTTAGAAATAATAACAAGC  400

seq1  TCTAATGAAGAGAAACTGCTAAGAGGCTGAAGTTACATGAAGATAATCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGAAGAGAAACTGCTAAGAGGCTGAAGTTACATGAAGATAATCTC  450

seq1  AGATGCAGAAGGAAAAAACAGGGATAAATAACACCAAAGGTTTTGTAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAGAAGGAAAAAACAGGGATAAATAACACCAAAGGTTTTGTAAAT  500

seq1  CTCAGAGAATTATATTATGTTTATTTAAAATACTTATGCACACATATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGAATTATATTATGTTTATTTAAAATACTTATGCACACATATACA  550

seq1  CATCCATGTGCACAAATACACACACATTTATGCACACACTCCCATGTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATGTGCACAAATACACACACATTTATGCACACACTCCCATGTGCA  600

seq1  CAAATACACACACATTTATACACACACTCCCATGTACTCCCATGCACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACACACACATTTATACACACACTCCCATGTACTCCCATGCACACA  650

seq1  CACACACACACACACACACACACACACGTGCACACACACACAGTGTCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACGTGCACACACACACAGTGTCATA  700

seq1  CACATCCTCTCTCCTCACAAGTAACATTACTTAGGGTGAAAATGAAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCTCTCTCCTCACAAGTAACATTACTTAGGGTGAAAATGAAATGA  750

seq1  ACTATCACACAAAAACCCCACTGCCAGGCATGGGAAAGTGCCAGTCACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCACACAAAAACCCCACTGCCAGGCATGGGAAAGTGCCAGTCACAC  800

seq1  TGTTGTTCAGGGAAGACTGAGACCTCCAAGACAATACACATTATTGATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTCAGGGAAGACTGAGACCTCCAAGACAATACACATTATTGATGG  850

seq1  TGTTCTTGGTGATTCCCAGACAAAAAAGTAAGGCAACCCTATTGCTGAAG  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGTTCTTGGTGATTCCCAGACAAAAAAGTAAGGCAACCCTATTGCTGATG  900

seq1  GAACCAAATAGGACTTTCAGAAATTCATCTGCATCTACTGCGTAAGCTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAACCAAATAGGACTTTCAGAAATTCATCTGCATCTACTGCGTAAGCTT-  949

seq1  CTTTCTGAGAACTAGTTCTTATAGTATAAGAGGGAGATGCTGGCTTTTTT  1000
      ||||||||| |||||||||||||||||| ||||||||||||||| |||||
seq2  CTTTCTGAG-ACTAGTTCTTATAGTATAGGAGGGAGATGCTGGC-TTTTT  997

seq1  CTGACTCCTGCTCCATGGGATCAAACAACCAGCCTGATAAACTAGGAGCC  1050
      |||||||||||||||||||||||||||  ||| ||||| ||||||||| |
seq2  CTGACTCCTGCTCCATGGGATCAAACA--CAG-CTGAT-AACTAGGAG-C  1042

seq1  ACAATTCTGAGCCACTCCCACTCTTTGACTTCCCAGCAAGGAATGTAATG  1100
      ||||| ||||||| ||||||||||||||||| ||||||    |||| |||
seq2  ACAATCCTGAGCC-CTCCCACTCTTTGACTTTCCAGCA---GATGT-ATG  1087

seq1  TGCTCCCAAACTGTGAACCAACATAAACTCATCTCCTTAAAAAGTAGATG  1150
      |||| || ||||||||  |||||| |||||||||| ||  ||||| ||||
seq2  TGCT-CCTAACTGTGA--CAACAT-AACTCATCTCTTT--AAAGT-GATG  1130

seq1  ACAACACAGAATGAGTTTTCAAAACACACCATAGAGTCAAA  1191
         |||| |||||||||     |||||||   | |||||||
seq2  ---ACACCGAATGAGTT----CAACACAC---ATAGTCAAA  1161

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information