BAC Information

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BAC

Clone NameB6Ng01-101G07
Chromosome15 (Build37)
Map Location 58,218,471 - 58,353,174
singlet/doubletdoublet
Overlap geneAnxa13, LOC100040231, D15Ertd621e, EG631797
Upstream geneBC026439, Zhx2, Derl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32, 8230402K04Rik
Downstream geneTmem65, EG546638, Trmt12, Rnf139, Tatdn1, Ndufb9, Mtss1, LOC100040330, EG268809, LOC665565, Sqle, E430025E21Rik, Nsmce2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101G07.bB6Ng01-101G07.g
ACCDH910589DH910590
length88719
definitionDH910589|Mus musculus domesticus DNA, BAC clone: B6Ng01-101G07, 5' end.DH910590|Mus musculus domesticus DNA, BAC clone: B6Ng01-101G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,218,471 - 58,218,558)(58,352,457 - 58,353,174)
sequence
gaattcctcttcctgcacttgttacatttccttgctacactgtaacttag
ctttgggcaatatgtcctgggggtgggggtgggggtgg
gaattctcatgttttcctgccctccaagcgatgtgggctgtctcctgggg
agagtctagagcaattgtaaagcctgtgaacagcctatgtgggatgtcac
gtcggcattcatccctgtgaaatatcagctccctggacacatggtcaacg
gccctttccactgttatctgtctcccatcttaataggctgctctagccag
tttcccccatagactcagctgcacagctgattgaaggactcttgacaagt
gactgtaagccatctagacgttccccgtcctaggaatttcactttgaaaa
gaatattttccagtttgattttcgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtagctatctctgtgttctactctgagagaaattttttaacctcatc
atcttctctgttttccttttattggttccgttttttctataagtccttat
ctctgcagacttgaagacagatgcaatcacaatggacagataattttaaa
attggtttgttactcctgtcatatgattcatgaagcagagcagggattcc
tgaatcaaatcactcaccttcttatagtaattactgtatgctttctgtct
cccatcaccatggatacacagcaagactgtgttgctcaggtgttcatgag
cctaacataggctgtgctcatacatttttccttcatcaacaggggtgtgt
gtgtgggtgtgtgtgtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_58218471_58218558
seq2: B6Ng01-101G07.b_49_136

seq1  GAATTCCTCTTCCTGCACTTGTTACATTTCCTTGCTACACTGTAACTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTCCTGCACTTGTTACATTTCCTTGCTACACTGTAACTTAG  50

seq1  CTTTGGGCAATATGTCCTGGGGGTGGGGGTGGGGGTGG  88
      ||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGCAATATGTCCTGGGGGTGGGGGTGGGGGTGG  88

seq1: chr15_58352457_58353174
seq2: B6Ng01-101G07.g_70_788 (reverse)

seq1  CCCACACACACACCCACACACACA-CCCTGTTGATGAAGGAAAAATGTAT  49
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCCACACACACACCCACACACACACCCCTGTTGATGAAGGAAAAATGTAT  50

seq1  GAGCACAGCCTATGTTAGGCTCATGAACACCTGAGCAACACAGTCTTGCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACAGCCTATGTTAGGCTCATGAACACCTGAGCAACACAGTCTTGCT  100

seq1  GTGTATCCATGGTGATGGGAGACAGAAAGCATACAGTAATTACTATAAGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATCCATGGTGATGGGAGACAGAAAGCATACAGTAATTACTATAAGA  150

seq1  AGGTGAGTGATTTGATTCAGGAATCCCTGCTCTGCTTCATGAATCATATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGTGATTTGATTCAGGAATCCCTGCTCTGCTTCATGAATCATATG  200

seq1  ACAGGAGTAACAAACCAATTTTAAAATTATCTGTCCATTGTGATTGCATC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGTAACAAACCAATTTTAAAATTATCTGTCCATTGTGATTGCATC  250

seq1  TGTCTTCAAGTCTGCAGAGATAAGGACTTATAGAAAAAACGGAACCAATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCAAGTCTGCAGAGATAAGGACTTATAGAAAAAACGGAACCAATA  300

seq1  AAAGGAAAACAGAGAAGATGATGAGGTTAAAAAATTTCTCTCAGAGTAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAACAGAGAAGATGATGAGGTTAAAAAATTTCTCTCAGAGTAGA  350

seq1  ACACAGAGATAGCTACACACACACACACACACACACACACACACACGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGATAGCTACACACACACACACACACACACACACACACACGAAA  400

seq1  ATCAAACTGGAAAATATTCTTTTCAAAGTGAAATTCCTAGGACGGGGAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACTGGAAAATATTCTTTTCAAAGTGAAATTCCTAGGACGGGGAAC  450

seq1  GTCTAGATGGCTTACAGTCACTTGTCAAGAGTCCTTCAATCAGCTGTGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGATGGCTTACAGTCACTTGTCAAGAGTCCTTCAATCAGCTGTGCA  500

seq1  GCTGAGTCTATGGGGGAAACTGGCTAGAGCAGCCTATTAAGATGGGAGAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTCTATGGGGGAAACTGGCTAGAGCAGCCTATTAAGATGGGAGAC  550

seq1  AGATAACAGTGGAAAGGGCCGTTGACCATGTGTCCAGGGAGCTGATATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACAGTGGAAAGGGCCGTTGACCATGTGTCCAGGGAGCTGATATTT  600

seq1  CACAGGGATGAATGCCGACGTGACATCCCACATAGGCTGTTCACAGGCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGATGAATGCCGACGTGACATCCCACATAGGCTGTTCACAGGCTT  650

seq1  TACAATTGCTCTAGACTCTCCCCAGGAGACAGCCCACATCGCTTGGAGGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTGCTCTAGACTCTCCCCAGGAGACAGCCCACATCGCTTGGAGGG  700

seq1  CAGGAAAACATGAGAATTC  718
      |||||||||||||||||||
seq2  CAGGAAAACATGAGAATTC  719