BAC Information

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BAC

Clone NameB6Ng01-101N22
Chromosome15 (Build37)
Map Location 79,603,615 - 79,763,611
singlet/doubletdoublet
Overlap geneDnalc4, Npcd, Nptxr, Cbx6, LOC100042748, Apobec3, Cbx7
Upstream geneMfng, Card10, LOC641104, LOC100041601, Cdc42ep1, Lgals2, Gga1, Sh3bp1, Pdxp, Lgals1, Nol12, Triobp, H1f0, Gcat, Galr3, LOC100042603, Ankrd54, Eif3s6ip, 1700088E04Rik, Polr2f, Sox10, LOC100041655, Pick1, Slc16a8, Baiap2l2, Pla2g6, Maff, 4732495E13Rik, Csnk1e, LOC675798, LOC100041676, Kcnj4, Kdelr3, Ddx17, Dmc1, 4933432B09Rik, Pgea1, Tomm22, Josd1, Gtpbp1, Unc84b
Downstream genePdgfb, Rpl3, Syngr1, Map3k7ip1, Mgat3, EG666948, Smcr7l, Atf4, Rps19bp1, Cacna1i, Enthd1, Grap2, AW544981, Tnrc6b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101N22.bB6Ng01-101N22.g
ACCDH910924DH910925
length8751,132
definitionDH910924|Mus musculus domesticus DNA, BAC clone: B6Ng01-101N22, 5' end.DH910925|Mus musculus domesticus DNA, BAC clone: B6Ng01-101N22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,762,738 - 79,763,611)(79,603,615 - 79,604,748)
sequence
gaattccatggagccacagttgtgaaccataatgttggaggtgggaacca
acccaggtcctctgaaagagcagaagtgctatctctccaatccttgtttc
aatgtatttatttgtgacagggtcttacatagctaaggttggccttgaac
tcctgatcttcctgcctcagctgtctaaatactgagattacttgcttgct
aatctcggctttaaggccacttcatttcggaccttctcagtctttagggg
gacttgggaagactgatcacgtccagcccagaagccgaactgagagatgg
gatggaccttagactgccaggagcatcagacctgctgccagctgcccaat
ttggtcagcaggcggggttaaggagtagggcgtggctccggcagcgaggg
ggcggagctgaccctctgggcgctttcagaggcacgcgcgcgcgcacccg
ctctctggcgctggggaaaacgttgcgcaggttcaaaaatggaacgtcgg
cggcgtgagggaacactagggggtgtgcgcgcgtgcgcgtgcgcgcccgg
acgagcctgacggggtccccgccgtcccgagcatcgcgcgcagccgccgc
ggccccgcagctccacccccggcccagcccggtccggtcctgggcccact
cgcccgccgccccgcatggagctgtcagccataggcgagcaggtgtttgc
ggtggagagcatccggaagaagcgcgtgcggaaggtgaggctgctcgggg
gcggcttccgggacagggcgaggttgcctcccgctcctcagcactgccca
cttccaggtttgggcagagcagaagtggttcagggatgacttgtggaccc
tgggctgcttggcgggtctcaacat
gaattcctagccacaggggaagagcagagccagacagcaggcctgaggtt
catctgcagacagtggctactgagtgggatactgcgcaggaaagcactgg
gctcttcccaggagggaaagtgtgaggtcataacagacaaaaagaagaaa
ttagggggtggaggtcagtttataaagtgcttgctacaaaagtatgaaga
ccagagttttctatcccagcacccgtgtaaagggctgggtgaggcggcca
tgcctgtgagcccagcattggagaggcagctgagaggatggatccttgga
agctcattagccatgaagcccagtggtgagctcctggcatcaaagaggga
gaccctgtctcagacaataaggtggagagtgattgtgaaagacaccgaat
gttgacttccagcctccacatgtaactgcacacacaggaacgcacataca
cacagaaaaaagacaagtgagcaagtaccgtctacactggactggaccct
ttgtacttcatttgccaaaggagatgaacttcagactattggctttatag
atgcactgactggtgcccagagagatcttaggtagttcttaccaatggga
atccaacttaagtttgccaaattctttgcattacataaaaggttaggaga
acacacatcctaaggggcgttgacagttaagtcccacaacatcatgctag
gacgtcagagtccaaaaggcctttgcgaccattcaacccaatttcgactt
tatagatgggaagactgagtgccccccgtcgggcaatagtcagcctagaa
tcccagagtatcgccaaatctccaaaccaagtgatctgggacgaggcgat
ttagaccaccagtcagcagcgaggtggtgcggggacatgtgcagtgggag
tcaaaacaggaaggttgcggagggcatggagctaacaggacccagatgat
tgaggaggagcgtcctgcaaagtggtgctggtgcgcaatgtactgccaag
ctccgtgggtctcctacgttggactaggggagtccttgggccgggaaccg
cggggctggagacctagggtggggcatacgatgtgccaggcttggaccgc
ccggcgtatctctcagcctccctcagggccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_79762738_79763611
seq2: B6Ng01-101N22.b_45_919 (reverse)

seq1  ATGTGGAGACCCGCCAGGCAGCCCAGGGTCCCCAGGTCACCCCTGCACCA  50
      |||| ||||||||||| |||||||||||||| || |||| ||||| ||||
seq2  ATGTTGAGACCCGCCAAGCAGCCCAGGGTCCACAAGTCATCCCTGAACCA  50

seq1  CTTTCTGCTCTGCCC-AACCTGG-AGTGGGCGGTGCTGAGGAGCGGGAGG  98
      | ||||||||||||| ||||||| ||||||| ||||||||||||||||||
seq2  C-TTCTGCTCTGCCCAAACCTGGAAGTGGGCAGTGCTGAGGAGCGGGAGG  99

seq1  CAACCTCGCCCTGTCCCGGGAGCCGCCCCCGAGCAGCCTCACCTTCCGCA  148
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAACCTCGCCCTGTCCCGGAAGCCGCCCCCGAGCAGCCTCACCTTCCGCA  149

seq1  CGCGCTTCTTCCGGATGCTCTCCACCGCAAACACCTGCTCGCCTATGGCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGCTTCTTCCGGATGCTCTCCACCGCAAACACCTGCTCGCCTATGGCT  199

seq1  GACAGCTCCATGCGGGGCGGCGGGCGAGTGGGCCCAGGACCGGACCGGGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTCCATGCGGGGCGGCGGGCGAGTGGGCCCAGGACCGGACCGGGC  249

seq1  TGGGCCGGGGGTGGAGCTGCGGGGCCGCGGCGGCTGCGCGCGATGCTCGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCGGGGGTGGAGCTGCGGGGCCGCGGCGGCTGCGCGCGATGCTCGG  299

seq1  GACGGCGGGGACCCCGTCAGGCTCGTCCGGGCGCGCACGCGCACGCGCGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGCGGGGACCCCGTCAGGCTCGTCCGGGCGCGCACGCGCACGCGCGC  349

seq1  ACACCCCCTAGTGTTCCCTCACGCCGCCGACGTTCCATTTTTGAACCTGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCCCTAGTGTTCCCTCACGCCGCCGACGTTCCATTTTTGAACCTGC  399

seq1  GCAACGTTTTCCCCAGCGCCAGAGAGCGGGTGCGCGCGCGCGTGCCTCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACGTTTTCCCCAGCGCCAGAGAGCGGGTGCGCGCGCGCGTGCCTCTG  449

seq1  AAAGCGCCCAGAGGGTCAGCTCCGCCCCCTCGCTGCCGGAGCCACGCCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCGCCCAGAGGGTCAGCTCCGCCCCCTCGCTGCCGGAGCCACGCCCT  499

seq1  ACTCCTTAACCCCGCCTGCTGACCAAATTGGGCAGCTGGCAGCAGGTCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTAACCCCGCCTGCTGACCAAATTGGGCAGCTGGCAGCAGGTCTG  549

seq1  ATGCTCCTGGCAGTCTAAGGTCCATCCCATCTCTCAGTTCGGCTTCTGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCTGGCAGTCTAAGGTCCATCCCATCTCTCAGTTCGGCTTCTGGG  599

seq1  CTGGACGTGATCAGTCTTCCCAAGTCCCCCTAAAGACTGAGAAGGTCCGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACGTGATCAGTCTTCCCAAGTCCCCCTAAAGACTGAGAAGGTCCGA  649

seq1  AATGAAGTGGCCTTAAAGCCGAGATTAGCAAGCAAGTAATCTCAGTATTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTGGCCTTAAAGCCGAGATTAGCAAGCAAGTAATCTCAGTATTT  699

seq1  AGACAGCTGAGGCAGGAAGATCAGGAGTTCAAGGCCAACCTTAGCTATGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCTGAGGCAGGAAGATCAGGAGTTCAAGGCCAACCTTAGCTATGT  749

seq1  AAGACCCTGTCACAAATAAATACATTGAAACAAGGATTGGAGAGATAGCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCTGTCACAAATAAATACATTGAAACAAGGATTGGAGAGATAGCA  799

seq1  CTTCTGCTCTTTCAGAGGACCTGGGTTGGTTCCCACCTCCAACATTATGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCTCTTTCAGAGGACCTGGGTTGGTTCCCACCTCCAACATTATGG  849

seq1  TTCACAACTGTGGCTCCATGGAATTC  874
      ||||||||||||||||||||||||||
seq2  TTCACAACTGTGGCTCCATGGAATTC  875

seq1: chr15_79603615_79604748
seq2: B6Ng01-101N22.g_70_1201

seq1  GAATTCCTAGCCACAGGGGAAGAGCAGAGCCAGACAGCAGGCCTGAGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGCCACAGGGGAAGAGCAGAGCCAGACAGCAGGCCTGAGGTT  50

seq1  CATCTGCAGACAGTGGCTACTGAGTGGGATACTGCGCAGGAAAGCACTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCAGACAGTGGCTACTGAGTGGGATACTGCGCAGGAAAGCACTGG  100

seq1  GCTCTTCCCAGGAGGGAAAGTGTGAGGTCATAACAGACAAAAAGAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCCCAGGAGGGAAAGTGTGAGGTCATAACAGACAAAAAGAAGAAA  150

seq1  TTAGGGGGTGGAGGTCAGTTTATAAAGTGCTTGCTACAAAAGTATGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGGGTGGAGGTCAGTTTATAAAGTGCTTGCTACAAAAGTATGAAGA  200

seq1  CCAGAGTTTTCTATCCCAGCACCCGTGTAAAGGGCTGGGTGAGGCGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTTTTCTATCCCAGCACCCGTGTAAAGGGCTGGGTGAGGCGGCCA  250

seq1  TGCCTGTGAGCCCAGCATTGGAGAGGCAGCTGAGAGGATGGATCCTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTGAGCCCAGCATTGGAGAGGCAGCTGAGAGGATGGATCCTTGGA  300

seq1  AGCTCATTAGCCATGAAGCCCAGTGGTGAGCTCCTGGCATCAAAGAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATTAGCCATGAAGCCCAGTGGTGAGCTCCTGGCATCAAAGAGGGA  350

seq1  GACCCTGTCTCAGACAATAAGGTGGAGAGTGATTGTGAAAGACACCGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGTCTCAGACAATAAGGTGGAGAGTGATTGTGAAAGACACCGAAT  400

seq1  GTTGACTTCCAGCCTCCACATGTAACTGCACACACAGGAACGCACATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTTCCAGCCTCCACATGTAACTGCACACACAGGAACGCACATACA  450

seq1  CACAGAAAAAAGACAAGTGAGCAAGTACCGTCTACACTGGACTGGACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAAAAGACAAGTGAGCAAGTACCGTCTACACTGGACTGGACCCT  500

seq1  TTGTACTTCATTTGCCAAAGGAGATGAACTTCAGACTATTGGCTTTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTTCATTTGCCAAAGGAGATGAACTTCAGACTATTGGCTTTATAG  550

seq1  ATGCACTGACTGGTGCCCAGAGAGATCTTAGGTAGTTCTTACCAATGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTGACTGGTGCCCAGAGAGATCTTAGGTAGTTCTTACCAATGGGA  600

seq1  ATCCAACTTAAGTTTGCCAAATTCTTTGCATTACATAAAAGGTTAGGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAACTTAAGTTTGCCAAATTCTTTGCATTACATAAAAGGTTAGGAGA  650

seq1  ACACACATCCTAAGGGGCGTTGACAGTTAAGTCCCACAACATCATGCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATCCTAAGGGGCGTTGACAGTTAAGTCCCACAACATCATGCTAG  700

seq1  GACGTCAGAGTCCAAAAGGCCTTTGCGACCATTCAACCCAATTTCGACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTCAGAGTCCAAAAGGCCTTTGCGACCATTCAACCCAATTTCGACTT  750

seq1  TATAGATGGGAAGACTGAGTGCCCCCCGTCGGGCAATAGTCAGCCTAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATGGGAAGACTGAGTGCCCCCCGTCGGGCAATAGTCAGCCTAGAA  800

seq1  TCCCAGAGTATCGCCAAATCTCCAAACCAAGTGATCTGGGACGAGGCGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGTATCGCCAAATCTCCAAACCAAGTGATCTGGGACGAGGCGAT  850

seq1  TTAGACCACCAGTCAGCAGCGAGGTGGTGCGGGGACAAAGTGCAGTGGGA  900
      |||||||||||||||||||||||||||||||||||| | |||||||||||
seq2  TTAGACCACCAGTCAGCAGCGAGGTGGTGCGGGGAC-ATGTGCAGTGGGA  899

seq1  GTCAAAACAGGGAGGATGC-GAGGGCATGGAGCTAAACAGGACCCAAGAT  949
      ||||||||||| ||| ||| |||||||||||||| |||||||||| ||||
seq2  GTCAAAACAGGAAGGTTGCGGAGGGCATGGAGCT-AACAGGACCC-AGAT  947

seq1  GAGTGAGGAGGAGCGGCCTGCAAAGTGGTGCTGGTGCGCAATGTCACTGC  999
      || |||||||||||| |||||||||||||||||||||||||||| |||||
seq2  GATTGAGGAGGAGCGTCCTGCAAAGTGGTGCTGGTGCGCAATGT-ACTGC  996

seq1  CAAGCTCCGT-GGTCTCCTACGTGGGACAAGGGGAGGTCCTGGGCCGGGA  1048
      |||||||||| |||||||||||| |||| |||||||  | ||||||||||
seq2  CAAGCTCCGTGGGTCTCCTACGTTGGACTAGGGGAGTCCTTGGGCCGGGA  1046

seq1  ACCGC-GGGCTGGGGACCTA-GGTGGGGCCTAGCGTTGGGCCAGGCCTTG  1096
      ||||| ||||||| |||||| |||||||| || || || ||||||| | |
seq2  ACCGCGGGGCTGGAGACCTAGGGTGGGGCATA-CGATGTGCCAGGCTTGG  1095

seq1  TCCGCCCCGCGCATCCTCCCGCCCTCCCTCAGGGCCAG  1134
       |||||| ||| || ||| |  ||||||||||||||||
seq2  ACCGCCCGGCGTAT-CTCTCAGCCTCCCTCAGGGCCAG  1132