BAC Information

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BAC

Clone NameB6Ng01-102E19
Chromosome15 (Build37)
Map Location 52,100,781 - 52,315,139
singlet/doubletdoublet
Overlap geneSlc30a8, LOC100039748
Upstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard, LOC100039720, LOC665219
Downstream geneThrap6, LOC100039745, Ext1, Samd12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102E19.bB6Ng01-102E19.g
ACCDH911230DH911231
length9331,114
definitionDH911230|Mus musculus domesticus DNA, BAC clone: B6Ng01-102E19, 5' end.DH911231|Mus musculus domesticus DNA, BAC clone: B6Ng01-102E19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,100,781 - 52,101,715)(52,314,028 - 52,315,139)
sequence
gaattcttcataagagcagatcttttttttatatttgtatttctattttt
atttttccttaagattttgtacattttttattggatattttctttattta
catttcaaatgttttcccttttccagggctcccctttggtaacccccttc
ccatcctccctctacctgcctctatgagggtgtttccctactcacccacc
cactcctgtcttcccgccctggcattatggaataccctcaggcccaaggg
cctctcctcttattgatttccaaaaaggccatcctttgccacatgggtcc
ctctatgtgtactctttggtttgtggtccagtccccaggagcttgtgggg
tctggctggttgacactgttgctccctccatggggctgcagatctcctca
actccttcagtcccttctccaattcgtctatcggagaccccgcgctcagt
ccaatggttggctatgagcagagcatccacctctgtatttgtcaggttct
ggcagagcctctcaggagataactatattaggcaccagtaagcaagcact
tctcagcatccacaatagcatccgggtctggtgtctgcatttgggatgga
ttcccaggtgggccagtgtctgaagaacagaccttttatttgaaaaaaaa
aaaaaacaaaacaaaaacaaataaacaaaaaccaaccaacagggcagcag
attaccaataaaatctctgtatgtatgagtttcaaatttttgctatgatt
ctaagagaaggaagagaaatcctttataaagggatgaagacttagaagag
agtaaagcagaacaaaaatagtaccattttaaatgcatcataaacaactg
aagttcctttccatacactggaaacagttcagcagactgcatatgaacac
ctctttttgcattatctccagtgtcctgtcatt
tgttccttaattcatttatttattccacatcttgagttaaatagtagtgt
acatataggtcaaatctaacaaggtgcatatgcaaaatggtgcttagtct
tttgtgtcttgttctccatgaaacaaatgagattttgaagcaaatgggtt
gtgaagttctttcccttggaactgtctgtagcacttgacaaattaaccat
cccaagtcacagctagggctttgcacactcagtctttaaatataatgatc
cagatagagtcagaatagtttcctgagcttttgagcttccaaagagaaat
aattaaaagaaaaataacacgaacaaagctcctctggtgacactagaaca
agtccctagtagagaactggaaagagtcagaaactacgtattttgagtaa
gcacttcaggtcctggggaaagcgactttgccttttattatagtccatgc
ttggggccagagagagaaggtatctatgcaaaagagattgatatcttctt
ctttgaaagattcaggaaaaggaacaagtgtatagagcagaaacactgcc
ttccaaatatatgcaaatccagaagtgttgattgctttctactccaacaa
gttgttgttgcttcagaataagttttgtgtgtctgagactggttcacatt
tctacttccttcaactgaaaatagttgtggacttctatgaaatggtagca
aggaactaatagacactggactttcactgaaattgagcgagtctgaggaa
ctgtcgatgtcctcaacagagaaacatagacttaacaacccaggaacaga
aaaggtcagatacccccccccccaaactgttttcctcttttctttagttt
ggaaatctttttaagtgtcaaacaaaactcttgagaaaggacaagccatg
aatggatggaaagatactttttctgctgctcatcaggatgatggactcaa
ataaaagtgataaaatgaatatgtgtaaagtcaagttatttattgtgcat
acgaatttggaaattaaccaaggataacagtgggaaattatgttgataca
gctacaccttactattttctgggatgtatctctaaatatccgcactccaa
aagtttctcctaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_52100781_52101715
seq2: B6Ng01-102E19.b_46_978

seq1  GAATTCTTCATAAGAGCAGATCTTTTTTTTATATTTGTATTTCTATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATAAGAGCAGATCTTTTTTTTATATTTGTATTTCTATTTTT  50

seq1  ATTTTTCCTTAAGATTTTGTACATTTTTTATTGGATATTTTCTTTATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCCTTAAGATTTTGTACATTTTTTATTGGATATTTTCTTTATTTA  100

seq1  CATTTCAAATGTTTTCCCTTTTCCAGGGCTCCCCTTTGGTAACCCCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAAATGTTTTCCCTTTTCCAGGGCTCCCCTTTGGTAACCCCCTTC  150

seq1  CCATCCTCCCTCTACCTGCCTCTATGAGGGTGTTTCCCTACTCACCCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTCCCTCTACCTGCCTCTATGAGGGTGTTTCCCTACTCACCCACC  200

seq1  CACTCCTGTCTTCCCGCCCTGGCATTATGGAATACCCTCAGGCCCAAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTGTCTTCCCGCCCTGGCATTATGGAATACCCTCAGGCCCAAGGG  250

seq1  CCTCTCCTCTTATTGATTTCCAAAAAGGCCATCCTTTGCCACATGGGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTCTTATTGATTTCCAAAAAGGCCATCCTTTGCCACATGGGTCC  300

seq1  CTCTATGTGTACTCTTTGGTTTGTGGTCCAGTCCCCAGGAGCTTGTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGTGTACTCTTTGGTTTGTGGTCCAGTCCCCAGGAGCTTGTGGGG  350

seq1  TCTGGCTGGTTGACACTGTTGCTCCCTCCATGGGGCTGCAGATCTCCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTGGTTGACACTGTTGCTCCCTCCATGGGGCTGCAGATCTCCTCA  400

seq1  ACTCCTTCAGTCCCTTCTCCAATTCGTCTATCGGAGACCCCGCGCTCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTCAGTCCCTTCTCCAATTCGTCTATCGGAGACCCCGCGCTCAGT  450

seq1  CCAATGGTTGGCTATGAGCAGAGCATCCACCTCTGTATTTGTCAGGTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGTTGGCTATGAGCAGAGCATCCACCTCTGTATTTGTCAGGTTCT  500

seq1  GGCAGAGCCTCTCAGGAGATAACTATATTAGGCACCAGTAAGCAAGCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGCCTCTCAGGAGATAACTATATTAGGCACCAGTAAGCAAGCACT  550

seq1  TCTCAGCATCCACAATAGCATCCGGGTCTGGTGTCTGCATTTGGGATGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCATCCACAATAGCATCCGGGTCTGGTGTCTGCATTTGGGATGGA  600

seq1  TTCCCAGGTGGGCCAGTGTCTGAAGAACAGACCTTTTATTTG-AAAAAAA  649
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCCCAGGTGGGCCAGTGTCTGAAGAACAGACCTTTTATTTGAAAAAAAA  650

seq1  AAAAAACAAAACAAAAACAAA-AAACAAAAACCAACCAACAGGGCAGCAG  698
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAAAACAAAACAAAAACAAATAAACAAAAACCAACCAACAGGGCAGCAG  700

seq1  ATTACCAAT-AAATCTCTGTATGTATGAG-TTCAAA-TTTTGCTATGATT  745
      ||||||||| ||||||||||||||||||| |||||| |||||||||||||
seq2  ATTACCAATAAAATCTCTGTATGTATGAGTTTCAAATTTTTGCTATGATT  750

seq1  CTAAGAGAAGGAAGAGAAATCCTTTATAAAAGGGATGAAGACATAGAAGA  795
      ||||||||||||||||||||||||||| |||||||||||||| |||||||
seq2  CTAAGAGAAGGAAGAGAAATCCTTTAT-AAAGGGATGAAGACTTAGAAGA  799

seq1  GAGTAAAGCAGAAACAAAAATAGTAACCATTTTAAATGCATCAGTAAAAC  845
      ||||||||||| |||||||||||| ||||||||||||||||||   ||||
seq2  GAGTAAAGCAG-AACAAAAATAGT-ACCATTTTAAATGCATCA--TAAAC  845

seq1  AACTGAAGTTCCCTTTCCATACACTGGAAACAGTTCAGCAGACTGCAGAT  895
      |||||||||| |||||||||||||||||||||||||||||||||||| ||
seq2  AACTGAAGTT-CCTTTCCATACACTGGAAACAGTTCAGCAGACTGCATAT  894

seq1  GAACACCTCTTTTGCTATTATCTCCAGTGTTCTGTACATT  935
      |||||||||||||   |||||||||||||| |||| ||||
seq2  GAACACCTCTTTTTGCATTATCTCCAGTGTCCTGT-CATT  933

seq1: chr15_52314028_52315139
seq2: B6Ng01-102E19.g_75_1188 (reverse)

seq1  TGTAGGAGAAACTTTTGGAGTGCTGATA-TTAGAGATACAT-CCAGAAAA  48
      ||||||||||||||||||||||| |||| |||||||||||| ||||||||
seq2  TGTAGGAGAAACTTTTGGAGTGCGGATATTTAGAGATACATCCCAGAAAA  50

seq1  TAGTAA-GTGTAGCTGTATC-ACATTCATTTCCACTG-TATCCTTGGTTT  95
      |||||| ||||||||||||| ||||   || |||||| ||||||||| ||
seq2  TAGTAAGGTGTAGCTGTATCAACATAATTTCCCACTGTTATCCTTGG-TT  99

seq1  AATCTCCAAATTCGTATGCACAATAAAATAACTTGACTTTTACAACAATA  145
      ||| |||||||||||||||||||| |||||||||||| ||||||   |||
seq2  AATTTCCAAATTCGTATGCACAAT-AAATAACTTGAC-TTTACA--CATA  145

seq1  TTCATTTTATCACTTTTATTTTGAGTCCATCATCCTGATGAGCAGCAGAA  195
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTCATTTTATCACTTTTA-TTTGAGTCCATCATCCTGATGAGCAGCAGAA  194

seq1  AAAGTATCTTTCCATCCATTCATGGCTTGTCCTTTCTCAAGAGTTTTGTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATCTTTCCATCCATTCATGGCTTGTCCTTTCTCAAGAGTTTTGTT  244

seq1  TGACACTTAAAAAGATTT-CAAACTAAAG-AAAGAGGAAAACAGTTT-GG  292
      |||||||||||||||||| |||||||||| ||||||||||||||||| ||
seq2  TGACACTTAAAAAGATTTCCAAACTAAAGAAAAGAGGAAAACAGTTTGGG  294

seq1  GGGGGGGGTATCTGACCTTTTCTGTTCCTGGGTTGTTAAGTCTATGTTTC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGTATCTGACCTTTTCTGTTCCTGGGTTGTTAAGTCTATGTTTC  344

seq1  TCTGTTGAGGACATCGACAGTTCCTCAGACTCGCTCAATTTCAGTGAAAG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGAGGACATCGACAGTTCCTCAGACTCGCTCAATTTCAGTGAAAG  394

seq1  TCCAGTGTCTATTAGTTCCTTGCTACCATTTCATAGAAGTCCACAACTAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGTCTATTAGTTCCTTGCTACCATTTCATAGAAGTCCACAACTAT  444

seq1  TTTCAGTTGAAGGAAGTAGAAATGTGAACCAGTCTCAGACACACAAAACT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTGAAGGAAGTAGAAATGTGAACCAGTCTCAGACACACAAAACT  494

seq1  TATTCTGAAGCAACAACAACTTGTTGGAGTAGAAAGCAATCAACACTTCT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGAAGCAACAACAACTTGTTGGAGTAGAAAGCAATCAACACTTCT  544

seq1  GGATTTGCATATATTTGGAAGGCAGTGTTTCTGCTCTATACACTTGTTCC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGCATATATTTGGAAGGCAGTGTTTCTGCTCTATACACTTGTTCC  594

seq1  TTTTCCTGAATCTTTCAAAGAAGAAGATATCAATCTCTTTTGCATAGATA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGAATCTTTCAAAGAAGAAGATATCAATCTCTTTTGCATAGATA  644

seq1  CCTTCTCTCTCTGGCCCCAAGCATGGACTATAATAAAAGGCAAAGTCGCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTCTCTGGCCCCAAGCATGGACTATAATAAAAGGCAAAGTCGCT  694

seq1  TTCCCCAGGACCTGAAGTGCTTACTCAAAATACGTAGTTTCTGACTCTTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGGACCTGAAGTGCTTACTCAAAATACGTAGTTTCTGACTCTTT  744

seq1  CCAGTTCTCTACTAGGGACTTGTTCTAGTGTCACCAGAGGAGCTTTGTTC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTCTACTAGGGACTTGTTCTAGTGTCACCAGAGGAGCTTTGTTC  794

seq1  GTGTTATTTTTCTTTTAATTATTTCTCTTTGGAAGCTCAAAAGCTCAGGA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATTTTTCTTTTAATTATTTCTCTTTGGAAGCTCAAAAGCTCAGGA  844

seq1  AACTATTCTGACTCTATCTGGATCATTATATTTAAAGACTGAGTGTGCAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTCTGACTCTATCTGGATCATTATATTTAAAGACTGAGTGTGCAA  894

seq1  AGCCCTAGCTGTGACTTGGGATGGTTAATTTGTCAAGTGCTACAGACAGT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTAGCTGTGACTTGGGATGGTTAATTTGTCAAGTGCTACAGACAGT  944

seq1  TCCAAGGGAAAGAACTTCACAACCCATTTGCTTCAAAATCTCATTTGTTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGGAAAGAACTTCACAACCCATTTGCTTCAAAATCTCATTTGTTT  994

seq1  CATGGAGAACAAGACACAAAAGACTAAGCACCATTTTGCATATGCACCTT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGAACAAGACACAAAAGACTAAGCACCATTTTGCATATGCACCTT  1044

seq1  GTTAGATTTGACCTATATGTACACTACTATTTAACTCAAGATGTGGAATA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGATTTGACCTATATGTACACTACTATTTAACTCAAGATGTGGAATA  1094

seq1  AATAAATGAATTAAGGAACA  1112
      ||||||||||||||||||||
seq2  AATAAATGAATTAAGGAACA  1114