BAC Information

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BAC

Clone NameB6Ng01-103G20
Chromosome15 (Build37)
Map Location 61,978,094 - 62,135,759
singlet/doubletdoublet
Overlap genePvt1, LOC100040584, H2afy3
Upstream geneLOC100040323, Myc
Downstream geneLOC100040430, Tsg101-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103G20.bB6Ng01-103G20.g
ACCDH912020DH912021
length1,1681,014
definitionDH912020|Mus musculus domesticus DNA, BAC clone: B6Ng01-103G20, 5' end.DH912021|Mus musculus domesticus DNA, BAC clone: B6Ng01-103G20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,134,577 - 62,135,759)(61,978,094 - 61,979,107)
sequence
gaattctcctcactggtaaccttgtttgcatctgcccctgtgtactttgg
cttctacagacccacagcctgtgtttacaaatctggaggaaagaaggaca
ggcattccaagagcgggcgatttgcagaagtggaccagtggctccccttc
ttgtttttcattgtaaaaagggtgtggaacattattgggtcattggttat
tctttgaaatcatccaagcccagctgaagtcaggttttcctctatattta
tatcactgtgagcctcaattttattaaattttaaaggaagatactgatat
aaaatttgcaattggaaccagcatataaacagcatatattcacttcatag
cttggtatcattatgtaaactaccattttgagctttactatgtcctctct
caagcatatccctgagactgcccttacttctaacttctcccctggagaaa
aatgactcccatcttgcttcttgatttaccatgaatcctctttctcattc
aggcatctccccaagaaggtgtttcctaactcagagtgaggacttgtcaa
cctcaaaggttaatcctgtctgcatccactctgggtaagtgactctgagc
acagtgtatccatgtgtctctatctcttcatgtattaattggtttaacag
aagtagatgtgtgaatttgactattaaacctcttccaacatttttcaccc
aatgccaatctcctatggaaagtggaaagccaaagatcagagtttcagcc
ctctttatccttacagtgagctcactgaggttctagaacatcagcttgat
cctgtcaaatagtaatgactaaataaccccaatgtgaaatactcaaggaa
aagctacgtaaactggtctagatacctaaggaatgaatgaagacatgtca
gaaaggactgacttggcatcagctggaggaattccaggagattctgggga
ggagatgctgagagagactatctagaatctagaagaggatgggggagcag
tccacagatctgcccacagatggaagacagtgtgtctactgcttttaata
tagggatgtgacaccatcacatgtactgatcaggaccattctaaatgctg
ctgtccttgaggaggccaattgagaagttaatccagaagctccaccatca
tcatcaaggctcaaattg
gaattctggtactcatctggatctcccccccccccatctctctctctctc
tctctctctctctctctctctaaaattcagcactagacaccagtcatggc
atactgctgctcctattcatgagggctggtttcatgccttgggtagtctt
ctctgcaaacaccctcacagaacacctaggaaggtgacacaaagtccagt
caacaatgaagactaatcaccacgcttggttggggaatatgttgtgttgg
aagtgaaactcgtgcctgttctaggatgaacactcttctcttcccagact
gtgtgaccttgaacatttattcagctttctggatggaaagccatcccatg
tccccagggctcagggtttcgggtaatgaaaaatacagatgttaaatatt
tcatcttccaccacactctagaaaatgctggctctctgtttttgagtaac
agcatcttcaggaaaatgactcgactcttgtatgagattcagttgacatt
ttctgtttagccatagagaagagattcaggtcctgagatctgtatctgtc
ataaaaccaccttggctcagagcctgagctcagacgatattttctacatc
tactacttgctagccagcctgagatctagtctggatttcacagtctcagt
gtgtgtgttcgtctataaaatgaggctaataaatacactagcatcacact
gttactgtgttaaggattcagagggaggtattggtctctctgggggcgtg
tccactggtcctccttgactctaatcaatcccctggccaaagccttttca
ttttcacagggactccagtcccattctggagattcagcgtttaaggaaaa
cagctttgtttgctctgtcctcaatgccattggcaatagaagtggtggtc
tcagggacagctgtgatgctccattggtatgtcagccgtgttctctttga
agtgttttaagaccaatttgtaacttgatttggaagggtattgatgactg
ttagggcctggctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_62134577_62135759
seq2: B6Ng01-103G20.b_43_1210 (reverse)

seq1  CAATTTGTAGCC-TGATGATGAATGGTGGAGCCTCTTGGATTAACTCTTC  49
      ||||||| |||| |||||||| |||||||||| || ||||||||||  ||
seq2  CAATTTG-AGCCTTGATGATG-ATGGTGGAGCTTC-TGGATTAACTTCTC  47

seq1  AATTGGCTTCCCTCAAGGGACAGGCAGCATCTAAGATGGTCCTGAACCAG  99
      ||||||| | |||||| ||||| ||||||| ||  ||||||||| | |||
seq2  AATTGGCCT-CCTCAA-GGACA-GCAGCATTTAGAATGGTCCTG-ATCAG  93

seq1  TACATGTTGATGGTGTCACATCCCTATATTTAAAAGCAGTTAGACACACT  149
      |||||| ||||||||||||||||||||| |||||||||| ||||||||||
seq2  TACATG-TGATGGTGTCACATCCCTATA-TTAAAAGCAG-TAGACACACT  140

seq1  GTCTTCCATCTGTGGGCAGATCTTGTGGACTGCTTCCCCCATCCTCTTCT  199
      |||||||||||||||||||||| |||||||||| ||||||||||||||||
seq2  GTCTTCCATCTGTGGGCAGATC-TGTGGACTGC-TCCCCCATCCTCTTCT  188

seq1  AGATTTCTAGATAGTCTCTCTCAGCATCCTCCTCCCCAGAATCTTCCTGG  249
      ||| ||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  AGA-TTCTAGATAGTCTCTCTCAGCAT-CTCCTCCCCAGAATC-TCCTGG  235

seq1  AATTCCTCCAGCTGAATGCCAAGTCAGTCCTTTCTGACATGTCTTCATTC  299
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AATTCCTCCAGCTG-ATGCCAAGTCAGTCCTTTCTGACATGTCTTCATTC  284

seq1  ATTCCTTAGGTATCTAGACCAGTTTACGTAGCTTTTCCTTGAGTATTTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTAGGTATCTAGACCAGTTTACGTAGCTTTTCCTTGAGTATTTCA  334

seq1  CATTGGGGTTATTTAGTCATTACTATTTGACAGGATCAAGCTGATGTTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGGGTTATTTAGTCATTACTATTTGACAGGATCAAGCTGATGTTCT  384

seq1  AGAACCTCAGTGAGCTCACTGTAAGGATAAAGAGGGCTGAAACTCTGATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTCAGTGAGCTCACTGTAAGGATAAAGAGGGCTGAAACTCTGATC  434

seq1  TTTGGCTTTCCACTTTCCATAGGAGATTGGCATTGGGTGAAAAATGTTGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTTCCACTTTCCATAGGAGATTGGCATTGGGTGAAAAATGTTGG  484

seq1  AAGAGGTTTAATAGTCAAATTCACACATCTACTTCTGTTAAACCAATTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTTTAATAGTCAAATTCACACATCTACTTCTGTTAAACCAATTAA  534

seq1  TACATGAAGAGATAGAGACACATGGATACACTGTGCTCAGAGTCACTTAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAAGAGATAGAGACACATGGATACACTGTGCTCAGAGTCACTTAC  584

seq1  CCAGAGTGGATGCAGACAGGATTAACCTTTGAGGTTGACAAGTCCTCACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTGGATGCAGACAGGATTAACCTTTGAGGTTGACAAGTCCTCACT  634

seq1  CTGAGTTAGGAAACACCTTCTTGGGGAGATGCCTGAATGAGAAAGAGGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTAGGAAACACCTTCTTGGGGAGATGCCTGAATGAGAAAGAGGAT  684

seq1  TCATGGTAAATCAAGAAGCAAGATGGGAGTCATTTTTCTCCAGGGGAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTAAATCAAGAAGCAAGATGGGAGTCATTTTTCTCCAGGGGAGAA  734

seq1  GTTAGAAGTAAGGGCAGTCTCAGGGATATGCTTGAGAGAGGACATAGTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAAGTAAGGGCAGTCTCAGGGATATGCTTGAGAGAGGACATAGTAA  784

seq1  AGCTCAAAATGGTAGTTTACATAATGATACCAAGCTATGAAGTGAATATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAAAATGGTAGTTTACATAATGATACCAAGCTATGAAGTGAATATA  834

seq1  TGCTGTTTATATGCTGGTTCCAATTGCAAATTTTATATCAGTATCTTCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTTATATGCTGGTTCCAATTGCAAATTTTATATCAGTATCTTCCT  884

seq1  TTAAAATTTAATAAAATTGAGGCTCACAGTGATATAAATATAGAGGAAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTTAATAAAATTGAGGCTCACAGTGATATAAATATAGAGGAAAA  934

seq1  CCTGACTTCAGCTGGGCTTGGATGATTTCAAAGAATAACCAATGACCCAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTTCAGCTGGGCTTGGATGATTTCAAAGAATAACCAATGACCCAA  984

seq1  TAATGTTCCACACCCTTTTTACAATGAAAAACAAGAAGGGGAGCCACTGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTCCACACCCTTTTTACAATGAAAAACAAGAAGGGGAGCCACTGG  1034

seq1  TCCACTTCTGCAAATCGCCCGCTCTTGGAATGCCTGTCCTTCTTTCCTCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCTGCAAATCGCCCGCTCTTGGAATGCCTGTCCTTCTTTCCTCC  1084

seq1  AGATTTGTAAACACAGGCTGTGGGTCTGTAGAAGCCAAAGTACACAGGGG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGTAAACACAGGCTGTGGGTCTGTAGAAGCCAAAGTACACAGGGG  1134

seq1  CAGATGCAAACAAGGTTACCAGTGAGGAGAATTC  1183
      ||||||||||||||||||||||||||||||||||
seq2  CAGATGCAAACAAGGTTACCAGTGAGGAGAATTC  1168

seq1: chr15_61978094_61979107
seq2: B6Ng01-103G20.g_69_1082

seq1  GAATTCTGGTACTCATCTGGATCTCCCCCCCCCCCATCTCTCTCTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTACTCATCTGGATCTCCCCCCCCCCCATCTCTCTCTCTCTC  50

seq1  TCTCTCTCTCTCTCTCTCTCTAAAATTCAGCACTAGACACCAGTCATGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTAAAATTCAGCACTAGACACCAGTCATGGC  100

seq1  ATACTGCTGCTCCTATTCATGAGGGCTGGTTTCATGCCTTGGGTAGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGCTGCTCCTATTCATGAGGGCTGGTTTCATGCCTTGGGTAGTCTT  150

seq1  CTCTGCAAACACCCTCACAGAACACCTAGGAAGGTGACACAAAGTCCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAAACACCCTCACAGAACACCTAGGAAGGTGACACAAAGTCCAGT  200

seq1  CAACAATGAAGACTAATCACCACGCTTGGTTGGGGAATATGTTGTGTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATGAAGACTAATCACCACGCTTGGTTGGGGAATATGTTGTGTTGG  250

seq1  AAGTGAAACTCGTGCCTGTTCTAGGATGAACACTCTTCTCTTCCCAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAACTCGTGCCTGTTCTAGGATGAACACTCTTCTCTTCCCAGACT  300

seq1  GTGTGACCTTGAACATTTATTCAGCTTTCTGGATGGAAAGCCATCCCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACCTTGAACATTTATTCAGCTTTCTGGATGGAAAGCCATCCCATG  350

seq1  TCCCCAGGGCTCAGGGTTTCGGGTAATGAAAAATACAGATGTTAAATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGGGCTCAGGGTTTCGGGTAATGAAAAATACAGATGTTAAATATT  400

seq1  TCATCTTCCACCACACTCTAGAAAATGCTGGCTCTCTGTTTTTGAGTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTCCACCACACTCTAGAAAATGCTGGCTCTCTGTTTTTGAGTAAC  450

seq1  AGCATCTTCAGGAAAATGACTCGACTCTTGTATGAGATTCAGTTGACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTTCAGGAAAATGACTCGACTCTTGTATGAGATTCAGTTGACATT  500

seq1  TTCTGTTTAGCCATAGAGAAGAGATTCAGGTCCTGAGATCTGTATCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTAGCCATAGAGAAGAGATTCAGGTCCTGAGATCTGTATCTGTC  550

seq1  ATAAAACCACCTTGGCTCAGAGCCTGAGCTCAGACGATATTTTCTACATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACCACCTTGGCTCAGAGCCTGAGCTCAGACGATATTTTCTACATC  600

seq1  TACTACTTGCTAGCCAGCCTGAGATCTAGTCTGGATTTCACAGTCTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTTGCTAGCCAGCCTGAGATCTAGTCTGGATTTCACAGTCTCAGT  650

seq1  GTGTGTGTTCGTCTATAAAATGAGGCTAATAAATACACTAGCATCACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTTCGTCTATAAAATGAGGCTAATAAATACACTAGCATCACACT  700

seq1  GTTACTGTGTTAAGGATTCAGAGGGAGGTATTGGTCTCTCTGGGGGCGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGTGTTAAGGATTCAGAGGGAGGTATTGGTCTCTCTGGGGGCGTG  750

seq1  TCCACTGGTCCTCCTTGACTCTAATCAATCCCCTGGCCAAAGCCTTTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGGTCCTCCTTGACTCTAATCAATCCCCTGGCCAAAGCCTTTTCA  800

seq1  TTTTCACA-GGACTCCAGTCCCATTCTGGAGATTCAGCGTTTAAGGAAAA  849
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACAGGGACTCCAGTCCCATTCTGGAGATTCAGCGTTTAAGGAAAA  850

seq1  CAGCTT--GTTGCTCTGTCCCCAATGCCA-TGGCAGTAGAAGTGGTGGTC  896
      ||||||   ||||||||||| |||||||| ||||| ||||||||||||||
seq2  CAGCTTTGTTTGCTCTGTCCTCAATGCCATTGGCAATAGAAGTGGTGGTC  900

seq1  TCAGGGACAGCTG-GATGCCTCATTGGTAATGTCAGCCG-GGTCCCTTTG  944
      ||||||||||||| |||||  ||||||| |||||||||| | || |||||
seq2  TCAGGGACAGCTGTGATGCTCCATTGGT-ATGTCAGCCGTGTTCTCTTTG  949

seq1  AAGTGGTTTTAAGACCAATTTGGTAACTTGATTTGGAAAGTGGTATTGAT  994
      |||| |||||||||||||||| ||||||||||||||||   |||||||||
seq2  AAGT-GTTTTAAGACCAATTT-GTAACTTGATTTGGAA--GGGTATTGAT  995

seq1  GACTGTTAGGGCCCTGGCTG  1014
      ||||||||||| ||||||||
seq2  GACTGTTAGGG-CCTGGCTG  1014