BAC Information

Click to search

BAC

Clone NameB6Ng01-104M24
Chromosome15 (Build37)
Map Location 19,092,269 - 19,266,467
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC666835, LOC666839, Cdh10, EG666857
Downstream geneEG666875, LOC621884, LOC100040265
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104M24.bB6Ng01-104M24.g
ACCDH913002DH913003
length2251,107
definitionDH913002|Mus musculus domesticus DNA, BAC clone: B6Ng01-104M24, 5' end.DH913003|Mus musculus domesticus DNA, BAC clone: B6Ng01-104M24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,266,243 - 19,266,467)(19,092,269 - 19,093,384)
sequence
aacatacttttaacaccttctaaaacaaaaaaaaaaaaaaccaaacaaaa
atcaacatgaacatatgaatggacaggttttacactttggcaattgcaag
aattttaagagcttattcaatccaagcttgattggatctcttcacataga
aaaattggatggactagaaacatacactattttagagtttatattttaat
aattttaaccctatattgtcttttg
gaattctctgttgagagtctgtctctttgtgtgcctgctgtgtgtggttt
tatttctgataggacttggcttaattctgacacattgtttctcttgactt
tcaatcctcaaatcagcaggaaaaaagacccattcctgcaatcttagaag
aactgaccatggagttatcctgtgtgggggtggagtgagcgcccgtatgt
gagggaacacaccagagggtgactcttggaagtctgttcttcccaatatt
ggatctgcatattgaattcagttatcatgcttacattgcaggcagattca
cctgttgagccatgtgtataattaatatacatcatataaaataattatta
ataaaatttttcattattttcatgatttgcgtactctgatttttaaatca
taaatgttgtggacaacatttaataaatatatgaatatatctgtttatga
acatattctacatccgatctggccatttttttattgttgataaactcatt
cttttcataatttacaactttgtagagaaaacgaaagtttaaccatatta
aattaatgttcatattatgaacagttaaagactttgaatgtttgtctggg
aaaaataaccactgacatttaaaaattgcattttcttatttgtttctcat
tctatactggataacattaacctttcttaaactaaacagataaaaatata
tgagttgaatataggtaatgaacttttatgttttacttttttttcctaga
gtattttttgatttgtatttgctaaaaatctatgacacttggcatttgcc
ctttggcctgtctaggactctaaaataattaacatgtagttgtcagcctt
ttgccaatcgagtttttttttctcttgatcctctttatatgagagctctt
tcatagtagacaaaaatgaatctgttaactctataaagcgatttctagct
cttagttaatggcaagtgcattcaagtcatcagagcaggtagtgacattt
ttcttcatcgtgagatatgtacttttacagtaatggattcacctagctcc
ttttcatgaaaaattctcatatgccaatttattgtactataccgaagacc
acacttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_19266243_19266467
seq2: B6Ng01-104M24.b_51_275 (reverse)

seq1  CAAAAGACAATATAGGGTTAAAATTATTAAAATATAAACTCTAAAATAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGACAATATAGGGTTAAAATTATTAAAATATAAACTCTAAAATAGT  50

seq1  GTATGTTTCTAGTCCATCCAATTTTTCTATGTGAAGAGATCCAATCAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTTCTAGTCCATCCAATTTTTCTATGTGAAGAGATCCAATCAAGC  100

seq1  TTGGATTGAATAAGCTCTTAAAATTCTTGCAATTGCCAAAGTGTAAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTGAATAAGCTCTTAAAATTCTTGCAATTGCCAAAGTGTAAAACC  150

seq1  TGTCCATTCATATGTTCATGTTGATTTTTGTTTGGTTTTTTTTTTTTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATTCATATGTTCATGTTGATTTTTGTTTGGTTTTTTTTTTTTTTG  200

seq1  TTTTAGAAGGTGTTAAAAGTATGTT  225
      |||||||||||||||||||||||||
seq2  TTTTAGAAGGTGTTAAAAGTATGTT  225

seq1: chr15_19092269_19093384
seq2: B6Ng01-104M24.g_70_1176

seq1  GAATTCTCTGTTGAGAGTCTGTCTCTTTGTGTGCCTGCTGTGTGTGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTGAGAGTCTGTCTCTTTGTGTGCCTGCTGTGTGTGGTTT  50

seq1  TATTTCTGATAGGACTTGGCTTAATTCTGACACATTGTTTCTCTTGACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGATAGGACTTGGCTTAATTCTGACACATTGTTTCTCTTGACTT  100

seq1  TCAATCCTCAAATCAGCAGGAAAAAAGACCCATTCCTGCAATCTTAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCTCAAATCAGCAGGAAAAAAGACCCATTCCTGCAATCTTAGAAG  150

seq1  AACTGACCATGGAGTTATCCTGTGTGGGGGTGGAGTGAGCGCCCGTATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACCATGGAGTTATCCTGTGTGGGGGTGGAGTGAGCGCCCGTATGT  200

seq1  GAGGGAACACACCAGAGGGTGACTCTTGGAAGTCTGTTCTTCCCAATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAACACACCAGAGGGTGACTCTTGGAAGTCTGTTCTTCCCAATATT  250

seq1  GGATCTGCATATTGAATTCAGTTATCATGCTTACATTGCAGGCAGATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGCATATTGAATTCAGTTATCATGCTTACATTGCAGGCAGATTCA  300

seq1  CCTGTTGAGCCATGTGTATAATTAATATACATCATATAAAATAATTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGAGCCATGTGTATAATTAATATACATCATATAAAATAATTATTA  350

seq1  ATAAAATTTTTCATTATTTTCATGATTTGCGTACTCTGATTTTTAAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTTTTCATTATTTTCATGATTTGCGTACTCTGATTTTTAAATCA  400

seq1  TAAATGTTGTGGACAACATTTAATAAATATATGAATATATCTGTTTATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTGTGGACAACATTTAATAAATATATGAATATATCTGTTTATGA  450

seq1  ACATATTCTACATCCGATCTGGCCATTTTTTTATTGTTGATAAACTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTCTACATCCGATCTGGCCATTTTTTTATTGTTGATAAACTCATT  500

seq1  CTTTTCATAATTTACAACTTTGTAGAGAAAACGAAAGTTTAACCATATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATAATTTACAACTTTGTAGAGAAAACGAAAGTTTAACCATATTA  550

seq1  AATTAATGTTCATATTATGAACAGTTAAAGACTTTGAATGTTTGTCTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATGTTCATATTATGAACAGTTAAAGACTTTGAATGTTTGTCTGGG  600

seq1  AAAAATAACCACTGACATTTAAAAATTGCATTTTCTTATTTGTTTCTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAACCACTGACATTTAAAAATTGCATTTTCTTATTTGTTTCTCAT  650

seq1  TCTATACTGGATAACATTAACCTTTCTTAAACTAAACAGATAAAAATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACTGGATAACATTAACCTTTCTTAAACTAAACAGATAAAAATATA  700

seq1  TGAGTTGAATATAGGTAATGAACTTTTATGTTTTAC-TTTTCTTCCTAGA  749
      |||||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  TGAGTTGAATATAGGTAATGAACTTTTATGTTTTACTTTTTTTTCCTAGA  750

seq1  GTATTTTTTGATCTGTATTTGCTAAAAATCTATGACACTT-GCATTTGCC  798
      |||||||||||| ||||||||||||||||||||||||||| |||||||||
seq2  GTATTTTTTGATTTGTATTTGCTAAAAATCTATGACACTTGGCATTTGCC  800

seq1  C-TTGGCCTGTCTAGGACTCT-AAATAATTAACATGTAGTTGTCAGCC-T  845
      | ||||||||||||||||||| |||||||||||||||||||||||||| |
seq2  CTTTGGCCTGTCTAGGACTCTAAAATAATTAACATGTAGTTGTCAGCCTT  850

seq1  TTGCCAATCGAGTTTTTTTTTCTCTTGATCCTCTTTTATATGAGAGCTTC  895
      ||||||||||||||||||||||||||||||||| ||||||||||||||  
seq2  TTGCCAATCGAGTTTTTTTTTCTCTTGATCCTC-TTTATATGAGAGCTCT  899

seq1  TTCATAGTAGACAAAAATGAAATCTGTTAACTCTATAAAGCGATTCCTAG  945
      ||||||||||||||||||| ||||||||||||||||||||||||| ||||
seq2  TTCATAGTAGACAAAAATG-AATCTGTTAACTCTATAAAGCGATTTCTAG  948

seq1  CTCTTAGTTAATGGCAAAGTGCATTCAAAGTCATCAGAGCAAGGTTGGTT  995
      ||||||||||||||| |||||||||| ||||||||||||| |||| |  |
seq2  CTCTTAGTTAATGGC-AAGTGCATTC-AAGTCATCAGAGC-AGGTAG--T  993

seq1  GACAATATTTCTCCATCGTGAAGATATGTCACTTTTACAGTAGT-GAATC  1044
      ||| || ||||| ||||||| |||||||| |||||||||||| | || ||
seq2  GAC-ATTTTTCTTCATCGTG-AGATATGT-ACTTTTACAGTAATGGATTC  1040

seq1  ACCTAAAGGCT-CTTTGCAGGAAAATATTCTCAAATAGCCAATATTATGT  1093
      |||||   ||| |||| || ||||| ||||||| || |||||| |  |||
seq2  ACCTA---GCTCCTTTTCATGAAAA-ATTCTCATAT-GCCAATTTATTGT  1085

seq1  ACCTAACACAGAGACCACACTTG  1116
      | |||   |  ||||||||||||
seq2  A-CTATACCGAAGACCACACTTG  1107